RNA–Protein interactions for RNA: ENST00000557941.1

EMC4-204, Transcript of ER membrane protein complex subunit 4, humanhuman

TSL 2

Gene EMC4, Length 1,201 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMC4-204ENST00000557941 NISCHQ9Y2I1 1504 aa40.24■■■■■ 4.03
EMC4-204ENST00000557941 ABCC9O60706 1549 aa36.82■■■■□ 3.48
EMC4-204ENST00000557941 CCDC180Q9P1Z9 1646 aa36.16■■■■□ 3.38
EMC4-204ENST00000557941 DNAJC5BQ9UF47 199 aa34.98■■■■□ 3.19
EMC4-204ENST00000557941 RB1CC1Q8TDY2 1594 aa34.73■■■■□ 3.15
EMC4-204ENST00000557941 DCAF8L2P0C7V8 631 aa34.39■■■■□ 3.1
EMC4-204ENST00000557941 NACADO15069 1562 aa34.38■■■■□ 3.09
EMC4-204ENST00000557941 PABPN1Q86U42 306 aaKnown RBP eCLIP34.3■■■■□ 3.08
EMC4-204ENST00000557941 UNC13AQ9UPW8 1703 aa33.79■■■■□ 3
EMC4-204ENST00000557941 BICRAQ9NZM4 1560 aa33.73■■■□□ 2.99
EMC4-204ENST00000557941 MYO15BQ96JP2 1530 aa33.72■■■□□ 2.99
EMC4-204ENST00000557941 ZCCHC6Q5VYS8 1495 aaKnown RBP33.24■■■□□ 2.91
EMC4-204ENST00000557941 CECR2Q9BXF3 1484 aa33.19■■■□□ 2.9
EMC4-204ENST00000557941 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
EMC4-204ENST00000557941 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
EMC4-204ENST00000557941 DCAF1Q9Y4B6 1507 aa33.13■■■□□ 2.89
EMC4-204ENST00000557941 SCRIBQ14160 1630 aa33.06■■■□□ 2.88
EMC4-204ENST00000557941 EIF4G1Q04637 1599 aaKnown RBP32.96■■■□□ 2.87
EMC4-204ENST00000557941 DNAJC5Q9H3Z4 198 aa32.42■■■□□ 2.78
EMC4-204ENST00000557941 CUX2O14529 1486 aa31.84■■■□□ 2.69
EMC4-204ENST00000557941 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
EMC4-204ENST00000557941 NCAPD3P42695 1498 aa31.8■■■□□ 2.68
EMC4-204ENST00000557941 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
EMC4-204ENST00000557941 SMARCA2P51531 1590 aa31.5■■■□□ 2.63
EMC4-204ENST00000557941 NESP48681 1621 aa31.49■■■□□ 2.63
EMC4-204ENST00000557941 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
EMC4-204ENST00000557941 SMARCA4P51532 1647 aa31.44■■■□□ 2.62
EMC4-204ENST00000557941 BAZ1BQ9UIG0 1483 aaKnown RBP31.33■■■□□ 2.61
EMC4-204ENST00000557941 BAZ1AQ9NRL2 1556 aaPredicted RBP31.24■■■□□ 2.59
EMC4-204ENST00000557941 THOC2Q8NI27 1593 aaKnown RBP31.13■■■□□ 2.57
EMC4-204ENST00000557941 PEG3Q9GZU2 1588 aa31.1■■■□□ 2.57
EMC4-204ENST00000557941 LAMC3Q9Y6N6 1575 aa31.09■■■□□ 2.57
EMC4-204ENST00000557941 MROH2BQ7Z745 1585 aa31.03■■■□□ 2.56
EMC4-204ENST00000557941 PDS5BQ9NTI5 1447 aa31.02■■■□□ 2.56
EMC4-204ENST00000557941 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
EMC4-204ENST00000557941 TRIM41Q8WV44 630 aa30.91■■■□□ 2.54
EMC4-204ENST00000557941 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
EMC4-204ENST00000557941 MRC2Q9UBG0 1479 aa30.76■■■□□ 2.51
EMC4-204ENST00000557941 WDR62O43379 1518 aa30.65■■■□□ 2.5
EMC4-204ENST00000557941 WIZO95785 1651 aa30.58■■■□□ 2.49
EMC4-204ENST00000557941 CEP164Q9UPV0 1460 aa30.55■■■□□ 2.48
EMC4-204ENST00000557941 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
EMC4-204ENST00000557941 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
EMC4-204ENST00000557941 CFTRP13569 1480 aa30.38■■■□□ 2.45
EMC4-204ENST00000557941 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
EMC4-204ENST00000557941 URB2Q14146 1524 aaKnown RBP30.25■■■□□ 2.43
EMC4-204ENST00000557941 TOP2AP11388 1531 aaKnown RBP30.17■■■□□ 2.42
EMC4-204ENST00000557941 ZNF608Q9ULD9 1512 aaPredicted RBP29.99■■■□□ 2.39
EMC4-204ENST00000557941 IFT140Q96RY7 1462 aa29.95■■■□□ 2.39
EMC4-204ENST00000557941 RIMBP3CA6NJZ7 1639 aa29.94■■■□□ 2.38
EMC4-204ENST00000557941 RIMBP3BA6NNM3 1639 aa29.94■■■□□ 2.38
EMC4-204ENST00000557941 RIMBP3Q9UFD9 1639 aa29.94■■■□□ 2.38
EMC4-204ENST00000557941 CCDC88BA6NC98 1476 aa29.9■■■□□ 2.38
EMC4-204ENST00000557941 ARHGEF11O15085 1522 aa29.85■■■□□ 2.37
EMC4-204ENST00000557941 TOPBP1Q92547 1522 aa29.84■■■□□ 2.37
EMC4-204ENST00000557941 PRDM2Q13029 1718 aa29.8■■■□□ 2.36
EMC4-204ENST00000557941 CYB5RLQ6IPT4 315 aa29.79■■■□□ 2.36
EMC4-204ENST00000557941 ABCC8Q09428 1581 aa29.72■■■□□ 2.35
EMC4-204ENST00000557941 EIF4G3O43432 1585 aaKnown RBP29.71■■■□□ 2.35
EMC4-204ENST00000557941 AQRO60306 1485 aaKnown RBP eCLIP29.68■■■□□ 2.34
EMC4-204ENST00000557941 FBLN2P98095 1184 aa29.68■■■□□ 2.34
EMC4-204ENST00000557941 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
EMC4-204ENST00000557941 TRHP20396 242 aaPredicted RBP29.62■■■□□ 2.33
EMC4-204ENST00000557941 TARBP1Q13395 1621 aaKnown RBP29.55■■■□□ 2.32
EMC4-204ENST00000557941 ARAP1Q96P48 1450 aa29.54■■■□□ 2.32
EMC4-204ENST00000557941 POLA1P09884 1462 aaPredicted RBP29.52■■■□□ 2.32
EMC4-204ENST00000557941 CHD1O14646 1710 aa29.51■■■□□ 2.32
EMC4-204ENST00000557941 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
EMC4-204ENST00000557941 RAD54L2Q9Y4B4 1467 aa29.47■■■□□ 2.31
EMC4-204ENST00000557941 SOGA1O94964 1423 aa29.43■■■□□ 2.3
EMC4-204ENST00000557941 CHMP7Q8WUX9 453 aaPredicted RBP29.34■■■□□ 2.29
EMC4-204ENST00000557941 SNAPC4Q5SXM2 1469 aa29.33■■■□□ 2.29
EMC4-204ENST00000557941 FGD5Q6ZNL6 1462 aa29.28■■■□□ 2.28
EMC4-204ENST00000557941 CLASP1Q7Z460 1538 aa29.22■■■□□ 2.27
EMC4-204ENST00000557941 SUPT5HO00267 1087 aaKnown RBP29.21■■■□□ 2.27
EMC4-204ENST00000557941 MAGI1Q96QZ7 1491 aaPredicted RBP29.19■■■□□ 2.26
EMC4-204ENST00000557941 SYNJ1O43426 1573 aa29.18■■■□□ 2.26
EMC4-204ENST00000557941 GRIN2BQ13224 1484 aa29.18■■■□□ 2.26
EMC4-204ENST00000557941 CUX1P39880 1505 aa29.17■■■□□ 2.26
EMC4-204ENST00000557941 WDR97A6NE52 1622 aa29.16■■■□□ 2.26
EMC4-204ENST00000557941 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
EMC4-204ENST00000557941 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
EMC4-204ENST00000557941 GAPVD1Q14C86 1478 aa29.03■■■□□ 2.24
EMC4-204ENST00000557941 PBRM1Q86U86 1689 aa28.89■■■□□ 2.22
EMC4-204ENST00000557941 ABCA10Q8WWZ4 1543 aa28.89■■■□□ 2.22
EMC4-204ENST00000557941 ABCA5Q8WWZ7 1642 aa28.83■■■□□ 2.21
EMC4-204ENST00000557941 ERCC6L2Q5T890 1561 aa28.79■■■□□ 2.2
EMC4-204ENST00000557941 GRIN2AQ12879 1464 aa28.79■■■□□ 2.2
EMC4-204ENST00000557941 WRNQ14191 1432 aaPredicted RBP eCLIP28.75■■■□□ 2.19
EMC4-204ENST00000557941 NUP160Q12769 1436 aa28.7■■■□□ 2.19
EMC4-204ENST00000557941 CEP170Q5SW79 1584 aa28.7■■■□□ 2.18
EMC4-204ENST00000557941 ADAMTS12P58397 1594 aa28.67■■■□□ 2.18
EMC4-204ENST00000557941 FHAD1B1AJZ9 1412 aa28.64■■■□□ 2.18
EMC4-204ENST00000557941 SHROOM2Q13796 1616 aa28.54■■■□□ 2.16
EMC4-204ENST00000557941 PRG4Q92954 1404 aaPredicted RBP28.53■■■□□ 2.16
EMC4-204ENST00000557941 TOP2BQ02880 1626 aa28.53■■■□□ 2.16
EMC4-204ENST00000557941 JPH4Q96JJ6 628 aa28.5■■■□□ 2.15
EMC4-204ENST00000557941 ERICH3Q5RHP9 1530 aa28.49■■■□□ 2.15
EMC4-204ENST00000557941 BIVM-ERCC5R4GMW8 1640 aa28.48■■■□□ 2.15
EMC4-204ENST00000557941 FAM69CQ0P6D2 419 aa28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms