RNA–Protein interactions for RNA: ENST00000557849.1

INO80-203, Transcript of INO80 complex subunit, humanhuman

TSL 5

Gene INO80, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-203ENST00000557849 NISCHQ9Y2I1 1504 aa22.1■■□□□ 1.13
INO80-203ENST00000557849 ABCC9O60706 1549 aa19.97■□□□□ 0.79
INO80-203ENST00000557849 CCDC180Q9P1Z9 1646 aa19.87■□□□□ 0.77
INO80-203ENST00000557849 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
INO80-203ENST00000557849 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
INO80-203ENST00000557849 NACADO15069 1562 aa18.78■□□□□ 0.6
INO80-203ENST00000557849 UNC13AQ9UPW8 1703 aa18.65■□□□□ 0.58
INO80-203ENST00000557849 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
INO80-203ENST00000557849 PABPN1Q86U42 306 aaKnown RBP eCLIP18.58■□□□□ 0.56
INO80-203ENST00000557849 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
INO80-203ENST00000557849 MYO15BQ96JP2 1530 aa18.49■□□□□ 0.55
INO80-203ENST00000557849 ZCCHC6Q5VYS8 1495 aaKnown RBP18.3■□□□□ 0.52
INO80-203ENST00000557849 DCAF1Q9Y4B6 1507 aa18.23■□□□□ 0.51
INO80-203ENST00000557849 SCRIBQ14160 1630 aa18.11■□□□□ 0.49
INO80-203ENST00000557849 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
INO80-203ENST00000557849 CC2D2AQ9P2K1 1620 aa18.06■□□□□ 0.48
INO80-203ENST00000557849 CECR2Q9BXF3 1484 aa17.99■□□□□ 0.47
INO80-203ENST00000557849 EIF4G1Q04637 1599 aaKnown RBP17.99■□□□□ 0.47
INO80-203ENST00000557849 DNAJC5Q9H3Z4 198 aa17.36■□□□□ 0.37
INO80-203ENST00000557849 NCAPD3P42695 1498 aa17.36■□□□□ 0.37
INO80-203ENST00000557849 ATAD2BQ9ULI0 1458 aa17.31■□□□□ 0.36
INO80-203ENST00000557849 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
INO80-203ENST00000557849 HMGXB3Q12766 1538 aa17.22■□□□□ 0.35
INO80-203ENST00000557849 CUX2O14529 1486 aa17.22■□□□□ 0.35
INO80-203ENST00000557849 SMARCA2P51531 1590 aa17.2■□□□□ 0.34
INO80-203ENST00000557849 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
INO80-203ENST00000557849 NESP48681 1621 aa17.18■□□□□ 0.34
INO80-203ENST00000557849 BAZ1AQ9NRL2 1556 aaPredicted RBP17.12■□□□□ 0.33
INO80-203ENST00000557849 PEG3Q9GZU2 1588 aa17.11■□□□□ 0.33
INO80-203ENST00000557849 BAZ1BQ9UIG0 1483 aaKnown RBP17.08■□□□□ 0.32
INO80-203ENST00000557849 MROH2BQ7Z745 1585 aa17.06■□□□□ 0.32
INO80-203ENST00000557849 THOC2Q8NI27 1593 aaKnown RBP17.02■□□□□ 0.32
INO80-203ENST00000557849 LAMC3Q9Y6N6 1575 aa16.97■□□□□ 0.31
INO80-203ENST00000557849 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.31
INO80-203ENST00000557849 WIZO95785 1651 aa16.86■□□□□ 0.29
INO80-203ENST00000557849 PDS5BQ9NTI5 1447 aa16.83■□□□□ 0.28
INO80-203ENST00000557849 CADPSQ9ULU8 1353 aa16.8■□□□□ 0.28
INO80-203ENST00000557849 MRC2Q9UBG0 1479 aa16.73■□□□□ 0.27
INO80-203ENST00000557849 WDR62O43379 1518 aa16.73■□□□□ 0.27
INO80-203ENST00000557849 RSF1Q96T23 1441 aaPredicted RBP16.64■□□□□ 0.25
INO80-203ENST00000557849 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
INO80-203ENST00000557849 CFTRP13569 1480 aa16.62■□□□□ 0.25
INO80-203ENST00000557849 FANCD2Q9BXW9 1451 aa16.62■□□□□ 0.25
INO80-203ENST00000557849 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
INO80-203ENST00000557849 URB2Q14146 1524 aaKnown RBP16.55■□□□□ 0.24
INO80-203ENST00000557849 TRIM41Q8WV44 630 aa16.51■□□□□ 0.23
INO80-203ENST00000557849 PRDM2Q13029 1718 aa16.48■□□□□ 0.23
INO80-203ENST00000557849 CCDC88BA6NC98 1476 aa16.42■□□□□ 0.22
INO80-203ENST00000557849 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
INO80-203ENST00000557849 ZNF608Q9ULD9 1512 aaPredicted RBP16.36■□□□□ 0.21
INO80-203ENST00000557849 TOPBP1Q92547 1522 aa16.32■□□□□ 0.2
INO80-203ENST00000557849 IFT140Q96RY7 1462 aa16.29■□□□□ 0.2
INO80-203ENST00000557849 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
INO80-203ENST00000557849 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
INO80-203ENST00000557849 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
INO80-203ENST00000557849 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
INO80-203ENST00000557849 DNMBPQ6XZF7 1577 aa16.24■□□□□ 0.19
INO80-203ENST00000557849 TARBP1Q13395 1621 aaKnown RBP16.23■□□□□ 0.19
INO80-203ENST00000557849 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
INO80-203ENST00000557849 ABCC8Q09428 1581 aa16.19■□□□□ 0.18
INO80-203ENST00000557849 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.181e-7■■■□□ 17.9
INO80-203ENST00000557849 CHD1O14646 1710 aa16.17■□□□□ 0.18
INO80-203ENST00000557849 POLA1P09884 1462 aaPredicted RBP16.15■□□□□ 0.18
INO80-203ENST00000557849 RAD54L2Q9Y4B4 1467 aa16.1■□□□□ 0.17
INO80-203ENST00000557849 ARAP1Q96P48 1450 aa16.05■□□□□ 0.16
INO80-203ENST00000557849 TDRD9Q8NDG6 1382 aaKnown RBP16.03■□□□□ 0.16
INO80-203ENST00000557849 CYB5RLQ6IPT4 315 aa16.03■□□□□ 0.16
INO80-203ENST00000557849 CUX1P39880 1505 aa16.03■□□□□ 0.16
INO80-203ENST00000557849 SOGA1O94964 1423 aa16.02■□□□□ 0.16
INO80-203ENST00000557849 FGD5Q6ZNL6 1462 aa16.02■□□□□ 0.15
INO80-203ENST00000557849 FBLN2P98095 1184 aa16■□□□□ 0.15
INO80-203ENST00000557849 SNAPC4Q5SXM2 1469 aa15.99■□□□□ 0.15
INO80-203ENST00000557849 CLASP1Q7Z460 1538 aa15.98■□□□□ 0.15
INO80-203ENST00000557849 WDR97A6NE52 1622 aa15.97■□□□□ 0.15
INO80-203ENST00000557849 MAGI1Q96QZ7 1491 aaPredicted RBP15.91■□□□□ 0.14
INO80-203ENST00000557849 GRIN2BQ13224 1484 aa15.9■□□□□ 0.14
INO80-203ENST00000557849 PBRM1Q86U86 1689 aa15.89■□□□□ 0.13
INO80-203ENST00000557849 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
INO80-203ENST00000557849 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
INO80-203ENST00000557849 CHMP7Q8WUX9 453 aaPredicted RBP15.86■□□□□ 0.13
INO80-203ENST00000557849 ABCA5Q8WWZ7 1642 aa15.86■□□□□ 0.13
INO80-203ENST00000557849 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
INO80-203ENST00000557849 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
INO80-203ENST00000557849 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
INO80-203ENST00000557849 ERCC6L2Q5T890 1561 aa15.76■□□□□ 0.11
INO80-203ENST00000557849 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
INO80-203ENST00000557849 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
INO80-203ENST00000557849 GRIN2AQ12879 1464 aa15.72■□□□□ 0.11
INO80-203ENST00000557849 ADAMTS12P58397 1594 aa15.72■□□□□ 0.11
INO80-203ENST00000557849 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
INO80-203ENST00000557849 CEP170Q5SW79 1584 aa15.71■□□□□ 0.11
INO80-203ENST00000557849 NUP160Q12769 1436 aa15.69■□□□□ 0.1
INO80-203ENST00000557849 WRNQ14191 1432 aaPredicted RBP eCLIP15.69■□□□□ 0.1
INO80-203ENST00000557849 SHROOM2Q13796 1616 aa15.67■□□□□ 0.1
INO80-203ENST00000557849 FHAD1B1AJZ9 1412 aa15.62■□□□□ 0.09
INO80-203ENST00000557849 ERICH3Q5RHP9 1530 aa15.61■□□□□ 0.09
INO80-203ENST00000557849 KIF13AQ9H1H9 1805 aa15.54■□□□□ 0.08
INO80-203ENST00000557849 RUSC2Q8N2Y8 1516 aa15.52■□□□□ 0.07
INO80-203ENST00000557849 PRG4Q92954 1404 aaPredicted RBP15.51■□□□□ 0.07
INO80-203ENST00000557849 JPH4Q96JJ6 628 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms