RNA–Protein interactions for RNA: ENST00000557834.5

TRIP4-202, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-202ENST00000557834 NISCHQ9Y2I1 1504 aa54.3■■■■■ 6.28
TRIP4-202ENST00000557834 CCDC180Q9P1Z9 1646 aa48.15■■■■■ 5.3
TRIP4-202ENST00000557834 ABCC9O60706 1549 aa47.33■■■■■ 5.17
TRIP4-202ENST00000557834 DCAF8L2P0C7V8 631 aa45.63■■■■■ 4.9
TRIP4-202ENST00000557834 RB1CC1Q8TDY2 1594 aa45.39■■■■■ 4.86
TRIP4-202ENST00000557834 NACADO15069 1562 aa45.31■■■■■ 4.84
TRIP4-202ENST00000557834 ZCCHC6Q5VYS8 1495 aaKnown RBP45.23■■■■■ 4.83
TRIP4-202ENST00000557834 MYO15BQ96JP2 1530 aa44.96■■■■■ 4.79
TRIP4-202ENST00000557834 DCAF1Q9Y4B6 1507 aa44.81■■■■■ 4.76
TRIP4-202ENST00000557834 UNC13AQ9UPW8 1703 aa44.33■■■■■ 4.69
TRIP4-202ENST00000557834 PABPN1Q86U42 306 aaKnown RBP eCLIP44.31■■■■■ 4.68
TRIP4-202ENST00000557834 SCRIBQ14160 1630 aa44.13■■■■■ 4.65
TRIP4-202ENST00000557834 BICRAQ9NZM4 1560 aa44.04■■■■■ 4.64
TRIP4-202ENST00000557834 DNAJC5BQ9UF47 199 aa43.46■■■■■ 4.55
TRIP4-202ENST00000557834 SHROOM4Q9ULL8 1493 aa43.42■■■■■ 4.54
TRIP4-202ENST00000557834 EIF4G1Q04637 1599 aaKnown RBP42.88■■■■■ 4.45
TRIP4-202ENST00000557834 CC2D2AQ9P2K1 1620 aa42.72■■■■■ 4.43
TRIP4-202ENST00000557834 CECR2Q9BXF3 1484 aa42.47■■■■■ 4.39
TRIP4-202ENST00000557834 SMARCA4P51532 1647 aa42.13■■■■■ 4.33
TRIP4-202ENST00000557834 BAZ1AQ9NRL2 1556 aaPredicted RBP42.06■■■■■ 4.32
TRIP4-202ENST00000557834 ATAD2BQ9ULI0 1458 aa41.92■■■■■ 4.3
TRIP4-202ENST00000557834 MROH2BQ7Z745 1585 aa41.91■■■■■ 4.3
TRIP4-202ENST00000557834 NCAPD3P42695 1498 aa41.85■■■■■ 4.29
TRIP4-202ENST00000557834 SMARCA2P51531 1590 aa41.8■■■■■ 4.28
TRIP4-202ENST00000557834 PEG3Q9GZU2 1588 aa41.62■■■■■ 4.25
TRIP4-202ENST00000557834 HMGXB3Q12766 1538 aa41.6■■■■■ 4.25
TRIP4-202ENST00000557834 BAZ1BQ9UIG0 1483 aaKnown RBP41.6■■■■■ 4.25
TRIP4-202ENST00000557834 WIZO95785 1651 aa41.46■■■■■ 4.23
TRIP4-202ENST00000557834 RSF1Q96T23 1441 aaPredicted RBP41.44■■■■■ 4.22
TRIP4-202ENST00000557834 TOP2AP11388 1531 aaKnown RBP40.97■■■■■ 4.15
TRIP4-202ENST00000557834 NESP48681 1621 aa40.96■■■■■ 4.15
TRIP4-202ENST00000557834 ERCC6Q03468 1493 aa40.76■■■■■ 4.12
TRIP4-202ENST00000557834 LAMC3Q9Y6N6 1575 aa40.71■■■■■ 4.11
TRIP4-202ENST00000557834 CADPSQ9ULU8 1353 aa40.68■■■■■ 4.1
TRIP4-202ENST00000557834 SUPT5HO00267 1087 aaKnown RBP40.6■■■■■ 4.09
TRIP4-202ENST00000557834 CCDC88BA6NC98 1476 aa40.55■■■■■ 4.08
TRIP4-202ENST00000557834 PDS5BQ9NTI5 1447 aa40.49■■■■■ 4.07
TRIP4-202ENST00000557834 CFTRP13569 1480 aa40.4■■■■■ 4.06
TRIP4-202ENST00000557834 KIF21AQ7Z4S6 1674 aa40.38■■■■■ 4.05
TRIP4-202ENST00000557834 FANCD2Q9BXW9 1451 aa40.23■■■■■ 4.03
TRIP4-202ENST00000557834 THOC2Q8NI27 1593 aaKnown RBP40.21■■■■■ 4.03
TRIP4-202ENST00000557834 CUX2O14529 1486 aa40.2■■■■■ 4.03
TRIP4-202ENST00000557834 CEP164Q9UPV0 1460 aa40.15■■■■■ 4.02
TRIP4-202ENST00000557834 MRC2Q9UBG0 1479 aa40.09■■■■■ 4.01
TRIP4-202ENST00000557834 PRDM2Q13029 1718 aa39.99■■■■□ 3.99
TRIP4-202ENST00000557834 WDR62O43379 1518 aa39.91■■■■□ 3.98
TRIP4-202ENST00000557834 URB2Q14146 1524 aaKnown RBP39.83■■■■□ 3.97
TRIP4-202ENST00000557834 TOPBP1Q92547 1522 aa39.58■■■■□ 3.93
TRIP4-202ENST00000557834 ABCC8Q09428 1581 aa39.49■■■■□ 3.91
TRIP4-202ENST00000557834 DNMBPQ6XZF7 1577 aa39.49■■■■□ 3.91
TRIP4-202ENST00000557834 CUX1P39880 1505 aa39.3■■■■□ 3.88
TRIP4-202ENST00000557834 IFT140Q96RY7 1462 aa39.3■■■■□ 3.88
TRIP4-202ENST00000557834 POLA1P09884 1462 aaPredicted RBP39.24■■■■□ 3.87
TRIP4-202ENST00000557834 ZNF608Q9ULD9 1512 aaPredicted RBP39.19■■■■□ 3.86
TRIP4-202ENST00000557834 FGD5Q6ZNL6 1462 aa39.18■■■■□ 3.86
TRIP4-202ENST00000557834 RAD54L2Q9Y4B4 1467 aa39.16■■■■□ 3.86
TRIP4-202ENST00000557834 SOGA1O94964 1423 aa39.13■■■■□ 3.85
TRIP4-202ENST00000557834 TARBP1Q13395 1621 aaKnown RBP39.1■■■■□ 3.85
TRIP4-202ENST00000557834 WRNQ14191 1432 aaPredicted RBP eCLIP39.07■■■■□ 3.85
TRIP4-202ENST00000557834 DNAJC5Q9H3Z4 198 aa39.04■■■■□ 3.84
TRIP4-202ENST00000557834 AQRO60306 1485 aaKnown RBP eCLIP39■■■■□ 3.831e-6■□□□□ 11
TRIP4-202ENST00000557834 SYNJ1O43426 1573 aa38.97■■■■□ 3.83
TRIP4-202ENST00000557834 EIF4G3O43432 1585 aaKnown RBP38.97■■■■□ 3.83
TRIP4-202ENST00000557834 TDRD9Q8NDG6 1382 aaKnown RBP38.95■■■■□ 3.83
TRIP4-202ENST00000557834 TOP2BQ02880 1626 aa38.92■■■■□ 3.82
TRIP4-202ENST00000557834 BIVM-ERCC5R4GMW8 1640 aa38.89■■■■□ 3.82
TRIP4-202ENST00000557834 WDR97A6NE52 1622 aa38.74■■■■□ 3.79
TRIP4-202ENST00000557834 ABCA10Q8WWZ4 1543 aa38.73■■■■□ 3.79
TRIP4-202ENST00000557834 OSCARQ8IYS5 282 aa38.66■■■■□ 3.78
TRIP4-202ENST00000557834 GAPVD1Q14C86 1478 aa38.64■■■■□ 3.78
TRIP4-202ENST00000557834 FBLN2P98095 1184 aa38.62■■■■□ 3.77
TRIP4-202ENST00000557834 GRIN2BQ13224 1484 aa38.61■■■■□ 3.77
TRIP4-202ENST00000557834 SNAPC4Q5SXM2 1469 aa38.6■■■■□ 3.77
TRIP4-202ENST00000557834 ABCA5Q8WWZ7 1642 aa38.56■■■■□ 3.76
TRIP4-202ENST00000557834 PBRM1Q86U86 1689 aa38.5■■■■□ 3.75
TRIP4-202ENST00000557834 CHD1O14646 1710 aa38.47■■■■□ 3.75
TRIP4-202ENST00000557834 MAGI1Q96QZ7 1491 aaPredicted RBP38.47■■■■□ 3.75
TRIP4-202ENST00000557834 CHMP7Q8WUX9 453 aaPredicted RBP38.44■■■■□ 3.74
TRIP4-202ENST00000557834 SYNJ2O15056 1496 aa38.35■■■■□ 3.73
TRIP4-202ENST00000557834 TRIM41Q8WV44 630 aa38.27■■■■□ 3.72
TRIP4-202ENST00000557834 ERICH3Q5RHP9 1530 aa38.25■■■■□ 3.71
TRIP4-202ENST00000557834 KIF27Q86VH2 1401 aa38.23■■■■□ 3.71
TRIP4-202ENST00000557834 ADAMTS12P58397 1594 aa38.22■■■■□ 3.71
TRIP4-202ENST00000557834 FHAD1B1AJZ9 1412 aa38.18■■■■□ 3.7
TRIP4-202ENST00000557834 GRIN2AQ12879 1464 aa38.12■■■■□ 3.69
TRIP4-202ENST00000557834 IGF1RP08069 1367 aa38.1■■■■□ 3.69
TRIP4-202ENST00000557834 CLASP1Q7Z460 1538 aa38.03■■■■□ 3.68
TRIP4-202ENST00000557834 RUSC2Q8N2Y8 1516 aa38.01■■■■□ 3.67
TRIP4-202ENST00000557834 ARHGEF11O15085 1522 aa37.99■■■■□ 3.67
TRIP4-202ENST00000557834 RIMBP3CA6NJZ7 1639 aa37.98■■■■□ 3.67
TRIP4-202ENST00000557834 RIMBP3BA6NNM3 1639 aa37.98■■■■□ 3.67
TRIP4-202ENST00000557834 RIMBP3Q9UFD9 1639 aa37.98■■■■□ 3.67
TRIP4-202ENST00000557834 CEP170Q5SW79 1584 aa37.94■■■■□ 3.66
TRIP4-202ENST00000557834 NUP160Q12769 1436 aa37.92■■■■□ 3.66
TRIP4-202ENST00000557834 CUL7Q14999 1698 aa37.89■■■■□ 3.66
TRIP4-202ENST00000557834 CARMIL1Q5VZK9 1371 aa37.89■■■■□ 3.66
TRIP4-202ENST00000557834 CHIC1Q5VXU3 224 aa37.82■■■■□ 3.64
TRIP4-202ENST00000557834 CYB5RLQ6IPT4 315 aa37.76■■■■□ 3.64
TRIP4-202ENST00000557834 ARAP1Q96P48 1450 aa37.71■■■■□ 3.63
TRIP4-202ENST00000557834 RAPGEF2Q9Y4G8 1499 aa37.64■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms