RNA–Protein interactions for RNA: ENST00000557795.5

SPG21-204, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 747 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-204ENST00000557795 NISCHQ9Y2I1 1504 aa37.06■■■■□ 3.52
SPG21-204ENST00000557795 ABCC9O60706 1549 aa33.18■■■□□ 2.9
SPG21-204ENST00000557795 CCDC180Q9P1Z9 1646 aa33.12■■■□□ 2.89
SPG21-204ENST00000557795 RB1CC1Q8TDY2 1594 aa31.54■■■□□ 2.64
SPG21-204ENST00000557795 DCAF8L2P0C7V8 631 aa31.35■■■□□ 2.61
SPG21-204ENST00000557795 NACADO15069 1562 aa31.34■■■□□ 2.61
SPG21-204ENST00000557795 DNAJC5BQ9UF47 199 aa31.04■■■□□ 2.56
SPG21-204ENST00000557795 PABPN1Q86U42 306 aaKnown RBP eCLIP30.95■■■□□ 2.55
SPG21-204ENST00000557795 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
SPG21-204ENST00000557795 ZCCHC6Q5VYS8 1495 aaKnown RBP30.76■■■□□ 2.51
SPG21-204ENST00000557795 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
SPG21-204ENST00000557795 BICRAQ9NZM4 1560 aa30.62■■■□□ 2.49
SPG21-204ENST00000557795 DCAF1Q9Y4B6 1507 aa30.57■■■□□ 2.49
SPG21-204ENST00000557795 SCRIBQ14160 1630 aa30.29■■■□□ 2.44
SPG21-204ENST00000557795 SHROOM4Q9ULL8 1493 aa30.2■■■□□ 2.43
SPG21-204ENST00000557795 CC2D2AQ9P2K1 1620 aa29.9■■■□□ 2.38
SPG21-204ENST00000557795 EIF4G1Q04637 1599 aaKnown RBP29.87■■■□□ 2.37
SPG21-204ENST00000557795 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
SPG21-204ENST00000557795 NCAPD3P42695 1498 aa28.97■■■□□ 2.23
SPG21-204ENST00000557795 ATAD2BQ9ULI0 1458 aa28.91■■■□□ 2.22
SPG21-204ENST00000557795 SMARCA4P51532 1647 aa28.87■■■□□ 2.21
SPG21-204ENST00000557795 SMARCA2P51531 1590 aa28.8■■■□□ 2.2
SPG21-204ENST00000557795 BAZ1AQ9NRL2 1556 aaPredicted RBP28.75■■■□□ 2.19
SPG21-204ENST00000557795 HMGXB3Q12766 1538 aa28.74■■■□□ 2.19
SPG21-204ENST00000557795 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
SPG21-204ENST00000557795 ERCC6Q03468 1493 aa28.64■■■□□ 2.17
SPG21-204ENST00000557795 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
SPG21-204ENST00000557795 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
SPG21-204ENST00000557795 NESP48681 1621 aa28.52■■■□□ 2.16
SPG21-204ENST00000557795 CUX2O14529 1486 aa28.49■■■□□ 2.15
SPG21-204ENST00000557795 DNAJC5Q9H3Z4 198 aa28.39■■■□□ 2.14
SPG21-204ENST00000557795 LAMC3Q9Y6N6 1575 aa28.25■■■□□ 2.11
SPG21-204ENST00000557795 WIZO95785 1651 aa28.19■■■□□ 2.1
SPG21-204ENST00000557795 PDS5BQ9NTI5 1447 aa28.15■■■□□ 2.1
SPG21-204ENST00000557795 THOC2Q8NI27 1593 aaKnown RBP28.14■■■□□ 2.1
SPG21-204ENST00000557795 CADPSQ9ULU8 1353 aa28.12■■■□□ 2.09
SPG21-204ENST00000557795 RSF1Q96T23 1441 aaPredicted RBP28.05■■■□□ 2.08
SPG21-204ENST00000557795 KIF21AQ7Z4S6 1674 aa28.04■■■□□ 2.08
SPG21-204ENST00000557795 MRC2Q9UBG0 1479 aa27.91■■■□□ 2.06
SPG21-204ENST00000557795 TOP2AP11388 1531 aaKnown RBP27.88■■■□□ 2.05
SPG21-204ENST00000557795 CEP164Q9UPV0 1460 aa27.83■■■□□ 2.04
SPG21-204ENST00000557795 CFTRP13569 1480 aa27.81■■■□□ 2.04
SPG21-204ENST00000557795 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
SPG21-204ENST00000557795 WDR62O43379 1518 aa27.8■■■□□ 2.04
SPG21-204ENST00000557795 CCDC88BA6NC98 1476 aa27.58■■■□□ 2.01
SPG21-204ENST00000557795 URB2Q14146 1524 aaKnown RBP27.57■■■□□ 2
SPG21-204ENST00000557795 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
SPG21-204ENST00000557795 TOPBP1Q92547 1522 aa27.28■■□□□ 1.96
SPG21-204ENST00000557795 TRIM41Q8WV44 630 aa27.27■■□□□ 1.96
SPG21-204ENST00000557795 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
SPG21-204ENST00000557795 OSCARQ8IYS5 282 aa27.25■■□□□ 1.95
SPG21-204ENST00000557795 ZNF608Q9ULD9 1512 aaPredicted RBP27.22■■□□□ 1.95
SPG21-204ENST00000557795 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
SPG21-204ENST00000557795 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
SPG21-204ENST00000557795 EIF4G3O43432 1585 aaKnown RBP27.02■■□□□ 1.92
SPG21-204ENST00000557795 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
SPG21-204ENST00000557795 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.91
SPG21-204ENST00000557795 TARBP1Q13395 1621 aaKnown RBP26.98■■□□□ 1.91
SPG21-204ENST00000557795 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
SPG21-204ENST00000557795 RAD54L2Q9Y4B4 1467 aa26.94■■□□□ 1.9
SPG21-204ENST00000557795 SOGA1O94964 1423 aa26.9■■□□□ 1.9
SPG21-204ENST00000557795 TDRD9Q8NDG6 1382 aaKnown RBP26.87■■□□□ 1.89
SPG21-204ENST00000557795 FGD5Q6ZNL6 1462 aa26.87■■□□□ 1.89
SPG21-204ENST00000557795 FBLN2P98095 1184 aa26.85■■□□□ 1.89
SPG21-204ENST00000557795 CUX1P39880 1505 aa26.85■■□□□ 1.89
SPG21-204ENST00000557795 RIMBP3CA6NJZ7 1639 aa26.83■■□□□ 1.88
SPG21-204ENST00000557795 RIMBP3BA6NNM3 1639 aa26.83■■□□□ 1.88
SPG21-204ENST00000557795 RIMBP3Q9UFD9 1639 aa26.83■■□□□ 1.88
SPG21-204ENST00000557795 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
SPG21-204ENST00000557795 CHD1O14646 1710 aa26.74■■□□□ 1.87
SPG21-204ENST00000557795 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
SPG21-204ENST00000557795 WDR97A6NE52 1622 aa26.68■■□□□ 1.86
SPG21-204ENST00000557795 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
SPG21-204ENST00000557795 GRIN2BQ13224 1484 aa26.65■■□□□ 1.86
SPG21-204ENST00000557795 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.86
SPG21-204ENST00000557795 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
SPG21-204ENST00000557795 GAPVD1Q14C86 1478 aa26.57■■□□□ 1.84
SPG21-204ENST00000557795 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
SPG21-204ENST00000557795 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
SPG21-204ENST00000557795 SYNJ2O15056 1496 aa26.54■■□□□ 1.84
SPG21-204ENST00000557795 CLASP1Q7Z460 1538 aa26.5■■□□□ 1.83
SPG21-204ENST00000557795 SYNJ1O43426 1573 aa26.5■■□□□ 1.83
SPG21-204ENST00000557795 WRNQ14191 1432 aaPredicted RBP eCLIP26.48■■□□□ 1.83
SPG21-204ENST00000557795 ABCA5Q8WWZ7 1642 aa26.47■■□□□ 1.83
SPG21-204ENST00000557795 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
SPG21-204ENST00000557795 TOP2BQ02880 1626 aa26.39■■□□□ 1.82
SPG21-204ENST00000557795 BIVM-ERCC5R4GMW8 1640 aa26.37■■□□□ 1.81
SPG21-204ENST00000557795 TRHP20396 242 aaPredicted RBP26.33■■□□□ 1.81
SPG21-204ENST00000557795 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
SPG21-204ENST00000557795 ADAMTS12P58397 1594 aa26.28■■□□□ 1.8
SPG21-204ENST00000557795 FHAD1B1AJZ9 1412 aa26.24■■□□□ 1.79
SPG21-204ENST00000557795 NUP160Q12769 1436 aa26.22■■□□□ 1.79
SPG21-204ENST00000557795 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
SPG21-204ENST00000557795 CEP170Q5SW79 1584 aa26.19■■□□□ 1.78
SPG21-204ENST00000557795 ERCC6L2Q5T890 1561 aa26.13■■□□□ 1.77
SPG21-204ENST00000557795 SHROOM2Q13796 1616 aa26.01■■□□□ 1.75
SPG21-204ENST00000557795 PRG4Q92954 1404 aaPredicted RBP25.98■■□□□ 1.75
SPG21-204ENST00000557795 JPH4Q96JJ6 628 aa25.96■■□□□ 1.75
SPG21-204ENST00000557795 KIF27Q86VH2 1401 aa25.96■■□□□ 1.75
SPG21-204ENST00000557795 IGF1RP08069 1367 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms