RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 NISCHQ9Y2I1 1504 aa29.45■■■□□ 2.31
LGMN-219ENST00000557725 ABCC9O60706 1549 aa26.75■■□□□ 1.87
LGMN-219ENST00000557725 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
LGMN-219ENST00000557725 RB1CC1Q8TDY2 1594 aa25.28■■□□□ 1.64
LGMN-219ENST00000557725 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
LGMN-219ENST00000557725 NACADO15069 1562 aa25.04■■□□□ 1.6
LGMN-219ENST00000557725 DCAF8L2P0C7V8 631 aa24.99■■□□□ 1.59
LGMN-219ENST00000557725 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
LGMN-219ENST00000557725 UNC13AQ9UPW8 1703 aa24.84■■□□□ 1.57
LGMN-219ENST00000557725 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.54
LGMN-219ENST00000557725 MYO15BQ96JP2 1530 aa24.57■■□□□ 1.52
LGMN-219ENST00000557725 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
LGMN-219ENST00000557725 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
LGMN-219ENST00000557725 SCRIBQ14160 1630 aa24.23■■□□□ 1.47
LGMN-219ENST00000557725 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
LGMN-219ENST00000557725 SHROOM4Q9ULL8 1493 aa24.1■■□□□ 1.45
LGMN-219ENST00000557725 CECR2Q9BXF3 1484 aa24.06■■□□□ 1.44
LGMN-219ENST00000557725 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
LGMN-219ENST00000557725 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
LGMN-219ENST00000557725 NCAPD3P42695 1498 aa23.12■■□□□ 1.29
LGMN-219ENST00000557725 ATAD2BQ9ULI0 1458 aa23.08■■□□□ 1.29
LGMN-219ENST00000557725 ERCC6Q03468 1493 aa23.05■■□□□ 1.28
LGMN-219ENST00000557725 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
LGMN-219ENST00000557725 CUX2O14529 1486 aa23■■□□□ 1.27
LGMN-219ENST00000557725 SMARCA2P51531 1590 aa22.96■■□□□ 1.27
LGMN-219ENST00000557725 NESP48681 1621 aa22.96■■□□□ 1.27
LGMN-219ENST00000557725 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
LGMN-219ENST00000557725 BAZ1BQ9UIG0 1483 aaKnown RBP22.84■■□□□ 1.25
LGMN-219ENST00000557725 BAZ1AQ9NRL2 1556 aaPredicted RBP22.84■■□□□ 1.25
LGMN-219ENST00000557725 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
LGMN-219ENST00000557725 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
LGMN-219ENST00000557725 THOC2Q8NI27 1593 aaKnown RBP22.72■■□□□ 1.23
LGMN-219ENST00000557725 KIF21AQ7Z4S6 1674 aa22.65■■□□□ 1.22
LGMN-219ENST00000557725 LAMC3Q9Y6N6 1575 aa22.64■■□□□ 1.22
LGMN-219ENST00000557725 WIZO95785 1651 aa22.5■■□□□ 1.19
LGMN-219ENST00000557725 PDS5BQ9NTI5 1447 aa22.49■■□□□ 1.19
LGMN-219ENST00000557725 CADPSQ9ULU8 1353 aa22.43■■□□□ 1.18
LGMN-219ENST00000557725 MRC2Q9UBG0 1479 aa22.36■■□□□ 1.17
LGMN-219ENST00000557725 WDR62O43379 1518 aa22.32■■□□□ 1.16
LGMN-219ENST00000557725 CEP164Q9UPV0 1460 aa22.24■■□□□ 1.15
LGMN-219ENST00000557725 TRIM41Q8WV44 630 aa22.23■■□□□ 1.15
LGMN-219ENST00000557725 FANCD2Q9BXW9 1451 aa22.22■■□□□ 1.15
LGMN-219ENST00000557725 RSF1Q96T23 1441 aaPredicted RBP22.18■■□□□ 1.14
LGMN-219ENST00000557725 CFTRP13569 1480 aa22.15■■□□□ 1.14
LGMN-219ENST00000557725 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
LGMN-219ENST00000557725 URB2Q14146 1524 aaKnown RBP22.09■■□□□ 1.13
LGMN-219ENST00000557725 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
LGMN-219ENST00000557725 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
LGMN-219ENST00000557725 CCDC88BA6NC98 1476 aa21.9■■□□□ 1.1
LGMN-219ENST00000557725 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
LGMN-219ENST00000557725 TOPBP1Q92547 1522 aa21.78■■□□□ 1.08
LGMN-219ENST00000557725 IFT140Q96RY7 1462 aa21.77■■□□□ 1.08
LGMN-219ENST00000557725 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
LGMN-219ENST00000557725 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
LGMN-219ENST00000557725 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
LGMN-219ENST00000557725 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
LGMN-219ENST00000557725 DNMBPQ6XZF7 1577 aa21.67■■□□□ 1.06
LGMN-219ENST00000557725 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
LGMN-219ENST00000557725 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
LGMN-219ENST00000557725 AQRO60306 1485 aaKnown RBP eCLIP21.62■■□□□ 1.05
LGMN-219ENST00000557725 CHD1O14646 1710 aa21.61■■□□□ 1.05
LGMN-219ENST00000557725 ABCC8Q09428 1581 aa21.61■■□□□ 1.05
LGMN-219ENST00000557725 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
LGMN-219ENST00000557725 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
LGMN-219ENST00000557725 CYB5RLQ6IPT4 315 aa21.51■■□□□ 1.03
LGMN-219ENST00000557725 FBLN2P98095 1184 aa21.5■■□□□ 1.03
LGMN-219ENST00000557725 TDRD9Q8NDG6 1382 aaKnown RBP21.46■■□□□ 1.03
LGMN-219ENST00000557725 ARAP1Q96P48 1450 aa21.45■■□□□ 1.03
LGMN-219ENST00000557725 SOGA1O94964 1423 aa21.42■■□□□ 1.02
LGMN-219ENST00000557725 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
LGMN-219ENST00000557725 CUX1P39880 1505 aa21.39■■□□□ 1.01
LGMN-219ENST00000557725 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
LGMN-219ENST00000557725 TRHP20396 242 aaPredicted RBP21.32■■□□□ 1
LGMN-219ENST00000557725 CLASP1Q7Z460 1538 aa21.3■■□□□ 1
LGMN-219ENST00000557725 WDR97A6NE52 1622 aa21.28■■□□□ 1
LGMN-219ENST00000557725 CHMP7Q8WUX9 453 aaPredicted RBP21.26■□□□□ 0.99
LGMN-219ENST00000557725 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
LGMN-219ENST00000557725 MAGI1Q96QZ7 1491 aaPredicted RBP21.24■□□□□ 0.99
LGMN-219ENST00000557725 SYNJ1O43426 1573 aa21.23■□□□□ 0.99
LGMN-219ENST00000557725 PBRM1Q86U86 1689 aa21.23■□□□□ 0.99
LGMN-219ENST00000557725 SYNJ2O15056 1496 aa21.2■□□□□ 0.98
LGMN-219ENST00000557725 GAPVD1Q14C86 1478 aa21.17■□□□□ 0.98
LGMN-219ENST00000557725 SUPT5HO00267 1087 aaKnown RBP21.13■□□□□ 0.97
LGMN-219ENST00000557725 ABCA5Q8WWZ7 1642 aa21.13■□□□□ 0.97
LGMN-219ENST00000557725 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
LGMN-219ENST00000557725 ERCC6L2Q5T890 1561 aa21.06■□□□□ 0.96
LGMN-219ENST00000557725 GRIN2AQ12879 1464 aa21■□□□□ 0.95
LGMN-219ENST00000557725 ADAMTS12P58397 1594 aa20.99■□□□□ 0.95
LGMN-219ENST00000557725 CEP170Q5SW79 1584 aa20.98■□□□□ 0.95
LGMN-219ENST00000557725 BIVM-ERCC5R4GMW8 1640 aa20.96■□□□□ 0.95
LGMN-219ENST00000557725 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
LGMN-219ENST00000557725 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
LGMN-219ENST00000557725 NUP160Q12769 1436 aa20.92■□□□□ 0.94
LGMN-219ENST00000557725 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
LGMN-219ENST00000557725 SHROOM2Q13796 1616 aa20.86■□□□□ 0.93
LGMN-219ENST00000557725 ERICH3Q5RHP9 1530 aa20.82■□□□□ 0.92
LGMN-219ENST00000557725 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
LGMN-219ENST00000557725 PRG4Q92954 1404 aaPredicted RBP20.75■□□□□ 0.91
LGMN-219ENST00000557725 KIF13AQ9H1H9 1805 aa20.74■□□□□ 0.91
LGMN-219ENST00000557725 RUSC2Q8N2Y8 1516 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms