RNA–Protein interactions for RNA: ENST00000557608.1

RGMA-212, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 4

Gene RGMA, Length 473 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-212ENST00000557608 NISCHQ9Y2I1 1504 aa47.59■■■■■ 5.21
RGMA-212ENST00000557608 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
RGMA-212ENST00000557608 ABCC9O60706 1549 aa41.53■■■■■ 4.24
RGMA-212ENST00000557608 RB1CC1Q8TDY2 1594 aa39.96■■■■□ 3.99
RGMA-212ENST00000557608 NACADO15069 1562 aa39.89■■■■□ 3.98
RGMA-212ENST00000557608 DCAF8L2P0C7V8 631 aa39.74■■■■□ 3.95
RGMA-212ENST00000557608 MYO15BQ96JP2 1530 aa39.63■■■■□ 3.93
RGMA-212ENST00000557608 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
RGMA-212ENST00000557608 DCAF1Q9Y4B6 1507 aa39.41■■■■□ 3.9
RGMA-212ENST00000557608 UNC13AQ9UPW8 1703 aa39.04■■■■□ 3.84
RGMA-212ENST00000557608 PABPN1Q86U42 306 aaKnown RBP eCLIP38.76■■■■□ 3.8
RGMA-212ENST00000557608 BICRAQ9NZM4 1560 aa38.73■■■■□ 3.79
RGMA-212ENST00000557608 SCRIBQ14160 1630 aa38.62■■■■□ 3.77
RGMA-212ENST00000557608 SHROOM4Q9ULL8 1493 aa38.38■■■■□ 3.73
RGMA-212ENST00000557608 DNAJC5BQ9UF47 199 aa38.21■■■■□ 3.71
RGMA-212ENST00000557608 EIF4G1Q04637 1599 aaKnown RBP37.72■■■■□ 3.63
RGMA-212ENST00000557608 CC2D2AQ9P2K1 1620 aa37.6■■■■□ 3.61
RGMA-212ENST00000557608 CECR2Q9BXF3 1484 aa37.36■■■■□ 3.57
RGMA-212ENST00000557608 SMARCA4P51532 1647 aa36.96■■■■□ 3.51
RGMA-212ENST00000557608 BAZ1AQ9NRL2 1556 aaPredicted RBP36.91■■■■□ 3.5
RGMA-212ENST00000557608 NCAPD3P42695 1498 aa36.8■■■■□ 3.48
RGMA-212ENST00000557608 ATAD2BQ9ULI0 1458 aa36.78■■■■□ 3.48
RGMA-212ENST00000557608 SMARCA2P51531 1590 aa36.76■■■■□ 3.48
RGMA-212ENST00000557608 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
RGMA-212ENST00000557608 PEG3Q9GZU2 1588 aa36.62■■■■□ 3.45
RGMA-212ENST00000557608 HMGXB3Q12766 1538 aa36.62■■■■□ 3.45
RGMA-212ENST00000557608 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
RGMA-212ENST00000557608 WIZO95785 1651 aa36.26■■■■□ 3.39
RGMA-212ENST00000557608 RSF1Q96T23 1441 aaPredicted RBP36.19■■■■□ 3.38
RGMA-212ENST00000557608 NESP48681 1621 aa35.9■■■■□ 3.34
RGMA-212ENST00000557608 TOP2AP11388 1531 aaKnown RBP35.88■■■■□ 3.33
RGMA-212ENST00000557608 LAMC3Q9Y6N6 1575 aa35.85■■■■□ 3.33
RGMA-212ENST00000557608 ERCC6Q03468 1493 aa35.84■■■■□ 3.33
RGMA-212ENST00000557608 CADPSQ9ULU8 1353 aa35.7■■■■□ 3.31
RGMA-212ENST00000557608 PDS5BQ9NTI5 1447 aa35.61■■■■□ 3.29
RGMA-212ENST00000557608 CUX2O14529 1486 aa35.54■■■■□ 3.28
RGMA-212ENST00000557608 KIF21AQ7Z4S6 1674 aa35.51■■■■□ 3.28
RGMA-212ENST00000557608 CFTRP13569 1480 aa35.48■■■■□ 3.27
RGMA-212ENST00000557608 CCDC88BA6NC98 1476 aa35.44■■■■□ 3.26
RGMA-212ENST00000557608 THOC2Q8NI27 1593 aaKnown RBP35.42■■■■□ 3.26
RGMA-212ENST00000557608 FANCD2Q9BXW9 1451 aa35.29■■■■□ 3.24
RGMA-212ENST00000557608 CEP164Q9UPV0 1460 aa35.27■■■■□ 3.24
RGMA-212ENST00000557608 MRC2Q9UBG0 1479 aa35.24■■■■□ 3.23
RGMA-212ENST00000557608 PRDM2Q13029 1718 aa35.24■■■■□ 3.23
RGMA-212ENST00000557608 WDR62O43379 1518 aa35.14■■■■□ 3.22
RGMA-212ENST00000557608 SUPT5HO00267 1087 aaKnown RBP35.13■■■■□ 3.21
RGMA-212ENST00000557608 URB2Q14146 1524 aaKnown RBP34.94■■■■□ 3.18
RGMA-212ENST00000557608 ABCC8Q09428 1581 aa34.74■■■■□ 3.15
RGMA-212ENST00000557608 TOPBP1Q92547 1522 aa34.71■■■■□ 3.15
RGMA-212ENST00000557608 DNMBPQ6XZF7 1577 aa34.68■■■■□ 3.14
RGMA-212ENST00000557608 DNAJC5Q9H3Z4 198 aa34.56■■■■□ 3.12
RGMA-212ENST00000557608 IFT140Q96RY7 1462 aa34.53■■■■□ 3.12
RGMA-212ENST00000557608 CUX1P39880 1505 aa34.4■■■■□ 3.1
RGMA-212ENST00000557608 POLA1P09884 1462 aaPredicted RBP34.4■■■■□ 3.1
RGMA-212ENST00000557608 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
RGMA-212ENST00000557608 TARBP1Q13395 1621 aaKnown RBP34.35■■■■□ 3.09
RGMA-212ENST00000557608 FGD5Q6ZNL6 1462 aa34.3■■■■□ 3.08
RGMA-212ENST00000557608 SOGA1O94964 1423 aa34.26■■■■□ 3.07
RGMA-212ENST00000557608 EIF4G3O43432 1585 aaKnown RBP34.24■■■■□ 3.07
RGMA-212ENST00000557608 RAD54L2Q9Y4B4 1467 aa34.23■■■■□ 3.07
RGMA-212ENST00000557608 AQRO60306 1485 aaKnown RBP eCLIP34.14■■■■□ 3.06
RGMA-212ENST00000557608 WRNQ14191 1432 aaPredicted RBP eCLIP34.13■■■■□ 3.05
RGMA-212ENST00000557608 WDR97A6NE52 1622 aa34.12■■■■□ 3.05
RGMA-212ENST00000557608 TOP2BQ02880 1626 aa34.09■■■■□ 3.05
RGMA-212ENST00000557608 BIVM-ERCC5R4GMW8 1640 aa34.09■■■■□ 3.05
RGMA-212ENST00000557608 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
RGMA-212ENST00000557608 SYNJ1O43426 1573 aa34.05■■■■□ 3.04
RGMA-212ENST00000557608 OSCARQ8IYS5 282 aa34.01■■■■□ 3.03
RGMA-212ENST00000557608 ABCA10Q8WWZ4 1543 aa33.98■■■■□ 3.03
RGMA-212ENST00000557608 GRIN2BQ13224 1484 aa33.89■■■■□ 3.02
RGMA-212ENST00000557608 GAPVD1Q14C86 1478 aa33.88■■■■□ 3.01
RGMA-212ENST00000557608 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
RGMA-212ENST00000557608 CHD1O14646 1710 aa33.84■■■■□ 3.01
RGMA-212ENST00000557608 SNAPC4Q5SXM2 1469 aa33.84■■■■□ 3.01
RGMA-212ENST00000557608 MAGI1Q96QZ7 1491 aaPredicted RBP33.83■■■■□ 3.01
RGMA-212ENST00000557608 PBRM1Q86U86 1689 aa33.83■■■■□ 3.01
RGMA-212ENST00000557608 FBLN2P98095 1184 aa33.75■■■□□ 2.99
RGMA-212ENST00000557608 SYNJ2O15056 1496 aa33.69■■■□□ 2.98
RGMA-212ENST00000557608 CHMP7Q8WUX9 453 aaPredicted RBP33.66■■■□□ 2.98
RGMA-212ENST00000557608 ERICH3Q5RHP9 1530 aa33.59■■■□□ 2.97
RGMA-212ENST00000557608 ADAMTS12P58397 1594 aa33.54■■■□□ 2.96
RGMA-212ENST00000557608 FHAD1B1AJZ9 1412 aa33.48■■■□□ 2.95
RGMA-212ENST00000557608 RIMBP3CA6NJZ7 1639 aa33.48■■■□□ 2.95
RGMA-212ENST00000557608 RIMBP3BA6NNM3 1639 aa33.48■■■□□ 2.95
RGMA-212ENST00000557608 RIMBP3Q9UFD9 1639 aa33.48■■■□□ 2.95
RGMA-212ENST00000557608 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
RGMA-212ENST00000557608 ARHGEF11O15085 1522 aa33.46■■■□□ 2.95
RGMA-212ENST00000557608 GRIN2AQ12879 1464 aa33.45■■■□□ 2.95
RGMA-212ENST00000557608 KIF27Q86VH2 1401 aa33.45■■■□□ 2.94
RGMA-212ENST00000557608 TRIM41Q8WV44 630 aa33.33■■■□□ 2.93
RGMA-212ENST00000557608 NUP160Q12769 1436 aa33.31■■■□□ 2.92
RGMA-212ENST00000557608 IGF1RP08069 1367 aa33.31■■■□□ 2.92
RGMA-212ENST00000557608 CEP170Q5SW79 1584 aa33.28■■■□□ 2.92
RGMA-212ENST00000557608 CUL7Q14999 1698 aa33.27■■■□□ 2.92
RGMA-212ENST00000557608 ARAP1Q96P48 1450 aa33.18■■■□□ 2.9
RGMA-212ENST00000557608 CYB5RLQ6IPT4 315 aa33.13■■■□□ 2.89
RGMA-212ENST00000557608 CARMIL1Q5VZK9 1371 aa33.11■■■□□ 2.89
RGMA-212ENST00000557608 SHROOM2Q13796 1616 aa33.09■■■□□ 2.89
RGMA-212ENST00000557608 RUSC2Q8N2Y8 1516 aa33.05■■■□□ 2.88
RGMA-212ENST00000557608 KIAA0586Q9BVV6 1533 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms