RNA–Protein interactions for RNA: ENST00000557585.5

PRKCH-226, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-226ENST00000557585 AEBP2Q6ZN18 517 aaPredicted RBP26.15■■□□□ 1.78
PRKCH-226ENST00000557585 NISCHQ9Y2I1 1504 aa25.36■■□□□ 1.65
PRKCH-226ENST00000557585 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
PRKCH-226ENST00000557585 CCDC180Q9P1Z9 1646 aa22.37■■□□□ 1.17
PRKCH-226ENST00000557585 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
PRKCH-226ENST00000557585 ABCC9O60706 1549 aa22.08■■□□□ 1.13
PRKCH-226ENST00000557585 PHF23Q9BUL5 403 aaPredicted RBP22.03■■□□□ 1.12
PRKCH-226ENST00000557585 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
PRKCH-226ENST00000557585 ZCCHC6Q5VYS8 1495 aaKnown RBP21.13■□□□□ 0.97
PRKCH-226ENST00000557585 RB1CC1Q8TDY2 1594 aa21.08■□□□□ 0.97
PRKCH-226ENST00000557585 NACADO15069 1562 aa21.06■□□□□ 0.96
PRKCH-226ENST00000557585 MYO15BQ96JP2 1530 aa20.9■□□□□ 0.94
PRKCH-226ENST00000557585 DCAF1Q9Y4B6 1507 aa20.87■□□□□ 0.93
PRKCH-226ENST00000557585 FOXD1Q16676 465 aa20.73■□□□□ 0.91
PRKCH-226ENST00000557585 PABPN1Q86U42 306 aaKnown RBP eCLIP20.72■□□□□ 0.91
PRKCH-226ENST00000557585 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.9
PRKCH-226ENST00000557585 SCRIBQ14160 1630 aa20.6■□□□□ 0.89
PRKCH-226ENST00000557585 BICRAQ9NZM4 1560 aa20.58■□□□□ 0.88
PRKCH-226ENST00000557585 DNAJC5BQ9UF47 199 aa20.35■□□□□ 0.85
PRKCH-226ENST00000557585 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
PRKCH-226ENST00000557585 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
PRKCH-226ENST00000557585 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
PRKCH-226ENST00000557585 CC2D2AQ9P2K1 1620 aa19.89■□□□□ 0.77
PRKCH-226ENST00000557585 CECR2Q9BXF3 1484 aa19.88■□□□□ 0.77
PRKCH-226ENST00000557585 SMARCA4P51532 1647 aa19.65■□□□□ 0.74
PRKCH-226ENST00000557585 MROH2BQ7Z745 1585 aa19.63■□□□□ 0.73
PRKCH-226ENST00000557585 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
PRKCH-226ENST00000557585 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
PRKCH-226ENST00000557585 PPP6R1Q9UPN7 881 aa19.56■□□□□ 0.72
PRKCH-226ENST00000557585 ADRA2BP18089 450 aa19.53■□□□□ 0.72
PRKCH-226ENST00000557585 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
PRKCH-226ENST00000557585 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
PRKCH-226ENST00000557585 SMARCA2P51531 1590 aa19.44■□□□□ 0.7
PRKCH-226ENST00000557585 RSF1Q96T23 1441 aaPredicted RBP19.41■□□□□ 0.7
PRKCH-226ENST00000557585 PEG3Q9GZU2 1588 aa19.4■□□□□ 0.7
PRKCH-226ENST00000557585 WIZO95785 1651 aa19.4■□□□□ 0.7
PRKCH-226ENST00000557585 BAZ1BQ9UIG0 1483 aaKnown RBP19.37■□□□□ 0.69
PRKCH-226ENST00000557585 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
PRKCH-226ENST00000557585 MSH5O43196 834 aa19.33■□□□□ 0.68
PRKCH-226ENST00000557585 NESP48681 1621 aa19.16■□□□□ 0.66
PRKCH-226ENST00000557585 TOP2AP11388 1531 aaKnown RBP19.12■□□□□ 0.65
PRKCH-226ENST00000557585 SUPT5HO00267 1087 aaKnown RBP19.05■□□□□ 0.64
PRKCH-226ENST00000557585 CCDC88BA6NC98 1476 aa18.97■□□□□ 0.63
PRKCH-226ENST00000557585 CADPSQ9ULU8 1353 aa18.96■□□□□ 0.63
PRKCH-226ENST00000557585 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
PRKCH-226ENST00000557585 LAMC3Q9Y6N6 1575 aa18.9■□□□□ 0.62
PRKCH-226ENST00000557585 CFTRP13569 1480 aa18.84■□□□□ 0.61
PRKCH-226ENST00000557585 KIF21AQ7Z4S6 1674 aa18.81■□□□□ 0.6
PRKCH-226ENST00000557585 PDS5BQ9NTI5 1447 aa18.8■□□□□ 0.6
PRKCH-226ENST00000557585 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
PRKCH-226ENST00000557585 THOC2Q8NI27 1593 aaKnown RBP18.73■□□□□ 0.59
PRKCH-226ENST00000557585 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
PRKCH-226ENST00000557585 MRC2Q9UBG0 1479 aa18.65■□□□□ 0.58
PRKCH-226ENST00000557585 CUX2O14529 1486 aa18.64■□□□□ 0.57
PRKCH-226ENST00000557585 URB2Q14146 1524 aaKnown RBP18.61■□□□□ 0.57
PRKCH-226ENST00000557585 WDR62O43379 1518 aa18.58■□□□□ 0.56
PRKCH-226ENST00000557585 PRDM2Q13029 1718 aa18.55■□□□□ 0.56
PRKCH-226ENST00000557585 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
PRKCH-226ENST00000557585 POTEDQ86YR6 584 aa18.44■□□□□ 0.54
PRKCH-226ENST00000557585 CUX1P39880 1505 aa18.39■□□□□ 0.54
PRKCH-226ENST00000557585 DNMBPQ6XZF7 1577 aa18.39■□□□□ 0.53
PRKCH-226ENST00000557585 ABCC8Q09428 1581 aa18.34■□□□□ 0.53
PRKCH-226ENST00000557585 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.53
PRKCH-226ENST00000557585 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.52
PRKCH-226ENST00000557585 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.52
PRKCH-226ENST00000557585 FGD5Q6ZNL6 1462 aa18.3■□□□□ 0.52
PRKCH-226ENST00000557585 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
PRKCH-226ENST00000557585 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
PRKCH-226ENST00000557585 SOGA1O94964 1423 aa18.24■□□□□ 0.51
PRKCH-226ENST00000557585 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
PRKCH-226ENST00000557585 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
PRKCH-226ENST00000557585 AQRO60306 1485 aaKnown RBP eCLIP18.23■□□□□ 0.51
PRKCH-226ENST00000557585 TDRD9Q8NDG6 1382 aaKnown RBP18.21■□□□□ 0.51
PRKCH-226ENST00000557585 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
PRKCH-226ENST00000557585 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
PRKCH-226ENST00000557585 BIVM-ERCC5R4GMW8 1640 aa18.13■□□□□ 0.49
PRKCH-226ENST00000557585 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
PRKCH-226ENST00000557585 WDR97A6NE52 1622 aa18.07■□□□□ 0.48
PRKCH-226ENST00000557585 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
PRKCH-226ENST00000557585 GAPVD1Q14C86 1478 aa18.01■□□□□ 0.47
PRKCH-226ENST00000557585 SNAPC4Q5SXM2 1469 aa18.01■□□□□ 0.47
PRKCH-226ENST00000557585 ABCA5Q8WWZ7 1642 aa17.98■□□□□ 0.47
PRKCH-226ENST00000557585 FBLN2P98095 1184 aa17.98■□□□□ 0.47
PRKCH-226ENST00000557585 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
PRKCH-226ENST00000557585 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
PRKCH-226ENST00000557585 PBRM1Q86U86 1689 aa17.91■□□□□ 0.46
PRKCH-226ENST00000557585 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
PRKCH-226ENST00000557585 CHD1O14646 1710 aa17.89■□□□□ 0.46
PRKCH-226ENST00000557585 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
PRKCH-226ENST00000557585 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
PRKCH-226ENST00000557585 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
PRKCH-226ENST00000557585 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
PRKCH-226ENST00000557585 MAPK8IP2Q13387 824 aaPredicted RBP17.86■□□□□ 0.45
PRKCH-226ENST00000557585 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
PRKCH-226ENST00000557585 IGF1RP08069 1367 aa17.83■□□□□ 0.45
PRKCH-226ENST00000557585 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
PRKCH-226ENST00000557585 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
PRKCH-226ENST00000557585 ERICH3Q5RHP9 1530 aa17.81■□□□□ 0.44
PRKCH-226ENST00000557585 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
PRKCH-226ENST00000557585 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms