RNA–Protein interactions for RNA: ENST00000557562.1

FERMT2-214, Transcript of fermitin family member 2, humanhuman

TSL 3

Gene FERMT2, Length 555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT2-214ENST00000557562 NISCHQ9Y2I1 1504 aa59.07■■■■■ 7.05
FERMT2-214ENST00000557562 CCDC180Q9P1Z9 1646 aa52.76■■■■■ 6.04
FERMT2-214ENST00000557562 ABCC9O60706 1549 aa52.45■■■■■ 5.99
FERMT2-214ENST00000557562 RB1CC1Q8TDY2 1594 aa50.04■■■■■ 5.6
FERMT2-214ENST00000557562 DCAF8L2P0C7V8 631 aa49.83■■■■■ 5.57
FERMT2-214ENST00000557562 NACADO15069 1562 aa49.79■■■■■ 5.56
FERMT2-214ENST00000557562 MYO15BQ96JP2 1530 aa49.19■■■■■ 5.46
FERMT2-214ENST00000557562 ZCCHC6Q5VYS8 1495 aaKnown RBP49.05■■■■■ 5.44
FERMT2-214ENST00000557562 PABPN1Q86U42 306 aaKnown RBP eCLIP48.95■■■■■ 5.43
FERMT2-214ENST00000557562 UNC13AQ9UPW8 1703 aa48.93■■■■■ 5.42
FERMT2-214ENST00000557562 DNAJC5BQ9UF47 199 aa48.79■■■■■ 5.4
FERMT2-214ENST00000557562 DCAF1Q9Y4B6 1507 aa48.74■■■■■ 5.39
FERMT2-214ENST00000557562 BICRAQ9NZM4 1560 aa48.58■■■■■ 5.37
FERMT2-214ENST00000557562 SCRIBQ14160 1630 aa48.22■■■■■ 5.31
FERMT2-214ENST00000557562 SHROOM4Q9ULL8 1493 aa47.86■■■■■ 5.25
FERMT2-214ENST00000557562 CC2D2AQ9P2K1 1620 aa47.36■■■■■ 5.17
FERMT2-214ENST00000557562 EIF4G1Q04637 1599 aaKnown RBP47.36■■■■■ 5.17
FERMT2-214ENST00000557562 CECR2Q9BXF3 1484 aa47.15■■■■■ 5.14
FERMT2-214ENST00000557562 SMARCA4P51532 1647 aa45.99■■■■■ 4.95
FERMT2-214ENST00000557562 NCAPD3P42695 1498 aa45.96■■■■■ 4.95
FERMT2-214ENST00000557562 ATAD2BQ9ULI0 1458 aa45.92■■■■■ 4.94
FERMT2-214ENST00000557562 BAZ1AQ9NRL2 1556 aaPredicted RBP45.81■■■■■ 4.92
FERMT2-214ENST00000557562 SMARCA2P51531 1590 aa45.79■■■■■ 4.92
FERMT2-214ENST00000557562 HMGXB3Q12766 1538 aa45.65■■■■■ 4.9
FERMT2-214ENST00000557562 MROH2BQ7Z745 1585 aa45.56■■■■■ 4.88
FERMT2-214ENST00000557562 BAZ1BQ9UIG0 1483 aaKnown RBP45.52■■■■■ 4.88
FERMT2-214ENST00000557562 PEG3Q9GZU2 1588 aa45.48■■■■■ 4.87
FERMT2-214ENST00000557562 ERCC6Q03468 1493 aa45.24■■■■■ 4.83
FERMT2-214ENST00000557562 NESP48681 1621 aa45.19■■■■■ 4.82
FERMT2-214ENST00000557562 WIZO95785 1651 aa45.06■■■■■ 4.8
FERMT2-214ENST00000557562 CUX2O14529 1486 aa44.92■■■■■ 4.78
FERMT2-214ENST00000557562 LAMC3Q9Y6N6 1575 aa44.86■■■■■ 4.77
FERMT2-214ENST00000557562 RSF1Q96T23 1441 aaPredicted RBP44.76■■■■■ 4.76
FERMT2-214ENST00000557562 CADPSQ9ULU8 1353 aa44.62■■■■■ 4.73
FERMT2-214ENST00000557562 PDS5BQ9NTI5 1447 aa44.6■■■■■ 4.73
FERMT2-214ENST00000557562 KIF21AQ7Z4S6 1674 aa44.59■■■■■ 4.73
FERMT2-214ENST00000557562 THOC2Q8NI27 1593 aaKnown RBP44.57■■■■■ 4.73
FERMT2-214ENST00000557562 TOP2AP11388 1531 aaKnown RBP44.47■■■■■ 4.71
FERMT2-214ENST00000557562 DNAJC5Q9H3Z4 198 aa44.42■■■■■ 4.7
FERMT2-214ENST00000557562 MRC2Q9UBG0 1479 aa44.21■■■■■ 4.67
FERMT2-214ENST00000557562 CFTRP13569 1480 aa44.19■■■■■ 4.66
FERMT2-214ENST00000557562 CEP164Q9UPV0 1460 aa44.14■■■■■ 4.66
FERMT2-214ENST00000557562 FANCD2Q9BXW9 1451 aa44.13■■■■■ 4.65
FERMT2-214ENST00000557562 WDR62O43379 1518 aa44.06■■■■■ 4.64
FERMT2-214ENST00000557562 CCDC88BA6NC98 1476 aa43.99■■■■■ 4.63
FERMT2-214ENST00000557562 PRDM2Q13029 1718 aa43.76■■■■■ 4.6
FERMT2-214ENST00000557562 URB2Q14146 1524 aaKnown RBP43.74■■■■■ 4.59
FERMT2-214ENST00000557562 TOPBP1Q92547 1522 aa43.34■■■■■ 4.53
FERMT2-214ENST00000557562 SUPT5HO00267 1087 aaKnown RBP43.25■■■■■ 4.51
FERMT2-214ENST00000557562 ABCC8Q09428 1581 aa43.23■■■■■ 4.51
FERMT2-214ENST00000557562 IFT140Q96RY7 1462 aa43.21■■■■■ 4.51
FERMT2-214ENST00000557562 DNMBPQ6XZF7 1577 aa43.2■■■■■ 4.51
FERMT2-214ENST00000557562 ZNF608Q9ULD9 1512 aaPredicted RBP43.15■■■■■ 4.5
FERMT2-214ENST00000557562 OSCARQ8IYS5 282 aa43.01■■■■■ 4.48
FERMT2-214ENST00000557562 POLA1P09884 1462 aaPredicted RBP42.93■■■■■ 4.46
FERMT2-214ENST00000557562 EIF4G3O43432 1585 aaKnown RBP42.91■■■■■ 4.46
FERMT2-214ENST00000557562 TARBP1Q13395 1621 aaKnown RBP42.9■■■■■ 4.46
FERMT2-214ENST00000557562 AQRO60306 1485 aaKnown RBP eCLIP42.83■■■■■ 4.45
FERMT2-214ENST00000557562 RAD54L2Q9Y4B4 1467 aa42.81■■■■■ 4.44
FERMT2-214ENST00000557562 TRIM41Q8WV44 630 aa42.78■■■■■ 4.44
FERMT2-214ENST00000557562 CUX1P39880 1505 aa42.77■■■■■ 4.44
FERMT2-214ENST00000557562 SOGA1O94964 1423 aa42.76■■■■■ 4.44
FERMT2-214ENST00000557562 FGD5Q6ZNL6 1462 aa42.74■■■■■ 4.43
FERMT2-214ENST00000557562 TDRD9Q8NDG6 1382 aaKnown RBP42.65■■■■■ 4.42
FERMT2-214ENST00000557562 CHD1O14646 1710 aa42.52■■■■■ 4.4
FERMT2-214ENST00000557562 FBLN2P98095 1184 aa42.52■■■■■ 4.4
FERMT2-214ENST00000557562 WDR97A6NE52 1622 aa42.43■■■■■ 4.38
FERMT2-214ENST00000557562 RIMBP3CA6NJZ7 1639 aa42.4■■■■■ 4.38
FERMT2-214ENST00000557562 RIMBP3BA6NNM3 1639 aa42.4■■■■■ 4.38
FERMT2-214ENST00000557562 RIMBP3Q9UFD9 1639 aa42.4■■■■■ 4.38
FERMT2-214ENST00000557562 SNAPC4Q5SXM2 1469 aa42.39■■■■■ 4.38
FERMT2-214ENST00000557562 GRIN2BQ13224 1484 aa42.31■■■■■ 4.36
FERMT2-214ENST00000557562 ARHGEF11O15085 1522 aa42.3■■■■■ 4.36
FERMT2-214ENST00000557562 GAPVD1Q14C86 1478 aa42.24■■■■■ 4.35
FERMT2-214ENST00000557562 MAGI1Q96QZ7 1491 aaPredicted RBP42.24■■■■■ 4.35
FERMT2-214ENST00000557562 ABCA10Q8WWZ4 1543 aa42.24■■■■■ 4.35
FERMT2-214ENST00000557562 WRNQ14191 1432 aaPredicted RBP eCLIP42.23■■■■■ 4.35
FERMT2-214ENST00000557562 CHMP7Q8WUX9 453 aaPredicted RBP42.23■■■■■ 4.35
FERMT2-214ENST00000557562 PBRM1Q86U86 1689 aa42.19■■■■■ 4.34
FERMT2-214ENST00000557562 SYNJ1O43426 1573 aa42.18■■■■■ 4.34
FERMT2-214ENST00000557562 TOP2BQ02880 1626 aa42.18■■■■■ 4.34
FERMT2-214ENST00000557562 BIVM-ERCC5R4GMW8 1640 aa42.18■■■■■ 4.34
FERMT2-214ENST00000557562 ABCA5Q8WWZ7 1642 aa42.14■■■■■ 4.34
FERMT2-214ENST00000557562 SYNJ2O15056 1496 aa42.11■■■■■ 4.33
FERMT2-214ENST00000557562 CYB5RLQ6IPT4 315 aa42.03■■■■■ 4.32
FERMT2-214ENST00000557562 CLASP1Q7Z460 1538 aa42■■■■■ 4.31
FERMT2-214ENST00000557562 ARAP1Q96P48 1450 aa41.92■■■■■ 4.3
FERMT2-214ENST00000557562 ADAMTS12P58397 1594 aa41.8■■■■■ 4.28
FERMT2-214ENST00000557562 GRIN2AQ12879 1464 aa41.78■■■■■ 4.28
FERMT2-214ENST00000557562 ERICH3Q5RHP9 1530 aa41.71■■■■■ 4.27
FERMT2-214ENST00000557562 FHAD1B1AJZ9 1412 aa41.7■■■■■ 4.27
FERMT2-214ENST00000557562 CEP170Q5SW79 1584 aa41.62■■■■■ 4.25
FERMT2-214ENST00000557562 NUP160Q12769 1436 aa41.59■■■■■ 4.25
FERMT2-214ENST00000557562 TRHP20396 242 aaPredicted RBP41.45■■■■■ 4.23
FERMT2-214ENST00000557562 ERCC6L2Q5T890 1561 aa41.45■■■■■ 4.23
FERMT2-214ENST00000557562 KIF27Q86VH2 1401 aa41.39■■■■■ 4.22
FERMT2-214ENST00000557562 SHROOM2Q13796 1616 aa41.34■■■■■ 4.21
FERMT2-214ENST00000557562 IGF1RP08069 1367 aa41.32■■■■■ 4.21
FERMT2-214ENST00000557562 JPH4Q96JJ6 628 aa41.22■■■■■ 4.19
FERMT2-214ENST00000557562 CUL7Q14999 1698 aa41.2■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 347.4 ms