RNA–Protein interactions for RNA: ENST00000557555.1

ITGA7-220, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-220ENST00000557555 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
ITGA7-220ENST00000557555 CCDC180Q9P1Z9 1646 aa31.88■■■□□ 2.69
ITGA7-220ENST00000557555 ABCC9O60706 1549 aa31.41■■■□□ 2.62
ITGA7-220ENST00000557555 RB1CC1Q8TDY2 1594 aa30.12■■■□□ 2.41
ITGA7-220ENST00000557555 NACADO15069 1562 aa30.03■■■□□ 2.4
ITGA7-220ENST00000557555 DCAF8L2P0C7V8 631 aa29.97■■■□□ 2.39
ITGA7-220ENST00000557555 MYO15BQ96JP2 1530 aa29.79■■■□□ 2.36
ITGA7-220ENST00000557555 ZCCHC6Q5VYS8 1495 aaKnown RBP29.74■■■□□ 2.35
ITGA7-220ENST00000557555 DCAF1Q9Y4B6 1507 aa29.59■■■□□ 2.33
ITGA7-220ENST00000557555 UNC13AQ9UPW8 1703 aa29.41■■■□□ 2.3
ITGA7-220ENST00000557555 PABPN1Q86U42 306 aaKnown RBP eCLIP29.32■■■□□ 2.28
ITGA7-220ENST00000557555 BICRAQ9NZM4 1560 aa29.22■■■□□ 2.27
ITGA7-220ENST00000557555 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
ITGA7-220ENST00000557555 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
ITGA7-220ENST00000557555 SHROOM4Q9ULL8 1493 aa28.9■■■□□ 2.22
ITGA7-220ENST00000557555 EIF4G1Q04637 1599 aaKnown RBP28.46■■■□□ 2.15
ITGA7-220ENST00000557555 CC2D2AQ9P2K1 1620 aa28.4■■■□□ 2.14
ITGA7-220ENST00000557555 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
ITGA7-220ENST00000557555 SMARCA4P51532 1647 aa27.79■■■□□ 2.04
ITGA7-220ENST00000557555 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
ITGA7-220ENST00000557555 NCAPD3P42695 1498 aa27.72■■■□□ 2.03
ITGA7-220ENST00000557555 ATAD2BQ9ULI0 1458 aa27.7■■■□□ 2.03
ITGA7-220ENST00000557555 SMARCA2P51531 1590 aa27.66■■■□□ 2.02
ITGA7-220ENST00000557555 HMGXB3Q12766 1538 aa27.57■■■□□ 2
ITGA7-220ENST00000557555 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
ITGA7-220ENST00000557555 PEG3Q9GZU2 1588 aa27.52■■■□□ 2
ITGA7-220ENST00000557555 BAZ1BQ9UIG0 1483 aaKnown RBP27.46■■□□□ 1.99
ITGA7-220ENST00000557555 WIZO95785 1651 aa27.24■■□□□ 1.95
ITGA7-220ENST00000557555 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
ITGA7-220ENST00000557555 NESP48681 1621 aa27.12■■□□□ 1.93
ITGA7-220ENST00000557555 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
ITGA7-220ENST00000557555 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.92
ITGA7-220ENST00000557555 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
ITGA7-220ENST00000557555 CADPSQ9ULU8 1353 aa26.9■■□□□ 1.9
ITGA7-220ENST00000557555 CUX2O14529 1486 aa26.88■■□□□ 1.89
ITGA7-220ENST00000557555 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
ITGA7-220ENST00000557555 KIF21AQ7Z4S6 1674 aa26.78■■□□□ 1.88
ITGA7-220ENST00000557555 THOC2Q8NI27 1593 aaKnown RBP26.75■■□□□ 1.87
ITGA7-220ENST00000557555 CFTRP13569 1480 aa26.7■■□□□ 1.87
ITGA7-220ENST00000557555 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
ITGA7-220ENST00000557555 FANCD2Q9BXW9 1451 aa26.59■■□□□ 1.85
ITGA7-220ENST00000557555 MRC2Q9UBG0 1479 aa26.59■■□□□ 1.85
ITGA7-220ENST00000557555 CEP164Q9UPV0 1460 aa26.57■■□□□ 1.84
ITGA7-220ENST00000557555 WDR62O43379 1518 aa26.5■■□□□ 1.83
ITGA7-220ENST00000557555 PRDM2Q13029 1718 aa26.45■■□□□ 1.82
ITGA7-220ENST00000557555 URB2Q14146 1524 aaKnown RBP26.34■■□□□ 1.81
ITGA7-220ENST00000557555 DNAJC5Q9H3Z4 198 aa26.33■■□□□ 1.81
ITGA7-220ENST00000557555 SUPT5HO00267 1087 aaKnown RBP26.32■■□□□ 1.8
ITGA7-220ENST00000557555 TOPBP1Q92547 1522 aa26.14■■□□□ 1.78
ITGA7-220ENST00000557555 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
ITGA7-220ENST00000557555 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
ITGA7-220ENST00000557555 IFT140Q96RY7 1462 aa26.04■■□□□ 1.76
ITGA7-220ENST00000557555 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
ITGA7-220ENST00000557555 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
ITGA7-220ENST00000557555 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
ITGA7-220ENST00000557555 CUX1P39880 1505 aa25.87■■□□□ 1.73
ITGA7-220ENST00000557555 EIF4G3O43432 1585 aaKnown RBP25.82■■□□□ 1.72
ITGA7-220ENST00000557555 FGD5Q6ZNL6 1462 aa25.81■■□□□ 1.72
ITGA7-220ENST00000557555 SOGA1O94964 1423 aa25.8■■□□□ 1.72
ITGA7-220ENST00000557555 RAD54L2Q9Y4B4 1467 aa25.8■■□□□ 1.72
ITGA7-220ENST00000557555 AQRO60306 1485 aaKnown RBP eCLIP25.76■■□□□ 1.71
ITGA7-220ENST00000557555 OSCARQ8IYS5 282 aa25.74■■□□□ 1.71
ITGA7-220ENST00000557555 TDRD9Q8NDG6 1382 aaKnown RBP25.69■■□□□ 1.7
ITGA7-220ENST00000557555 WDR97A6NE52 1622 aa25.65■■□□□ 1.7
ITGA7-220ENST00000557555 WRNQ14191 1432 aaPredicted RBP eCLIP25.63■■□□□ 1.69
ITGA7-220ENST00000557555 TOP2BQ02880 1626 aa25.59■■□□□ 1.69
ITGA7-220ENST00000557555 BIVM-ERCC5R4GMW8 1640 aa25.59■■□□□ 1.69
ITGA7-220ENST00000557555 SYNJ1O43426 1573 aa25.56■■□□□ 1.68
ITGA7-220ENST00000557555 ABCA10Q8WWZ4 1543 aa25.55■■□□□ 1.68
ITGA7-220ENST00000557555 GRIN2BQ13224 1484 aa25.53■■□□□ 1.68
ITGA7-220ENST00000557555 CHD1O14646 1710 aa25.52■■□□□ 1.68
ITGA7-220ENST00000557555 SNAPC4Q5SXM2 1469 aa25.51■■□□□ 1.67
ITGA7-220ENST00000557555 GAPVD1Q14C86 1478 aa25.5■■□□□ 1.67
ITGA7-220ENST00000557555 FBLN2P98095 1184 aa25.49■■□□□ 1.67
ITGA7-220ENST00000557555 MAGI1Q96QZ7 1491 aaPredicted RBP25.47■■□□□ 1.67
ITGA7-220ENST00000557555 ABCA5Q8WWZ7 1642 aa25.46■■□□□ 1.67
ITGA7-220ENST00000557555 PBRM1Q86U86 1689 aa25.44■■□□□ 1.66
ITGA7-220ENST00000557555 CHMP7Q8WUX9 453 aaPredicted RBP25.39■■□□□ 1.66
ITGA7-220ENST00000557555 SYNJ2O15056 1496 aa25.38■■□□□ 1.65
ITGA7-220ENST00000557555 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
ITGA7-220ENST00000557555 RIMBP3CA6NJZ7 1639 aa25.34■■□□□ 1.65
ITGA7-220ENST00000557555 RIMBP3BA6NNM3 1639 aa25.34■■□□□ 1.65
ITGA7-220ENST00000557555 RIMBP3Q9UFD9 1639 aa25.34■■□□□ 1.65
ITGA7-220ENST00000557555 ARHGEF11O15085 1522 aa25.32■■□□□ 1.64
ITGA7-220ENST00000557555 CLASP1Q7Z460 1538 aa25.26■■□□□ 1.63
ITGA7-220ENST00000557555 ERICH3Q5RHP9 1530 aa25.24■■□□□ 1.63
ITGA7-220ENST00000557555 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
ITGA7-220ENST00000557555 FHAD1B1AJZ9 1412 aa25.2■■□□□ 1.62
ITGA7-220ENST00000557555 GRIN2AQ12879 1464 aa25.19■■□□□ 1.62
ITGA7-220ENST00000557555 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
ITGA7-220ENST00000557555 CYB5RLQ6IPT4 315 aa25.1■■□□□ 1.61
ITGA7-220ENST00000557555 NUP160Q12769 1436 aa25.1■■□□□ 1.61
ITGA7-220ENST00000557555 ARAP1Q96P48 1450 aa25.09■■□□□ 1.61
ITGA7-220ENST00000557555 CEP170Q5SW79 1584 aa25.07■■□□□ 1.6
ITGA7-220ENST00000557555 IGF1RP08069 1367 aa25.04■■□□□ 1.6
ITGA7-220ENST00000557555 CUL7Q14999 1698 aa24.97■■□□□ 1.59
ITGA7-220ENST00000557555 SHROOM2Q13796 1616 aa24.92■■□□□ 1.58
ITGA7-220ENST00000557555 ERCC6L2Q5T890 1561 aa24.89■■□□□ 1.58
ITGA7-220ENST00000557555 CARMIL1Q5VZK9 1371 aa24.88■■□□□ 1.57
ITGA7-220ENST00000557555 RUSC2Q8N2Y8 1516 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms