RNA–Protein interactions for RNA: ENST00000557542.5

GPATCH2L-213, Transcript of G-patch domain containing 2 like, humanhuman

TSL 4

Gene GPATCH2L, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-213ENST00000557542 NISCHQ9Y2I1 1504 aa41.27■■■■■ 4.2
GPATCH2L-213ENST00000557542 ABCC9O60706 1549 aa37.22■■■■□ 3.55
GPATCH2L-213ENST00000557542 CCDC180Q9P1Z9 1646 aa37.02■■■■□ 3.52
GPATCH2L-213ENST00000557542 RB1CC1Q8TDY2 1594 aa35.34■■■■□ 3.25
GPATCH2L-213ENST00000557542 NACADO15069 1562 aa35.07■■■■□ 3.2
GPATCH2L-213ENST00000557542 DCAF8L2P0C7V8 631 aa34.99■■■■□ 3.19
GPATCH2L-213ENST00000557542 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
GPATCH2L-213ENST00000557542 PABPN1Q86U42 306 aaKnown RBP eCLIP34.66■■■■□ 3.14
GPATCH2L-213ENST00000557542 MYO15BQ96JP2 1530 aa34.54■■■■□ 3.12
GPATCH2L-213ENST00000557542 UNC13AQ9UPW8 1703 aa34.41■■■■□ 3.1
GPATCH2L-213ENST00000557542 BICRAQ9NZM4 1560 aa34.28■■■■□ 3.08
GPATCH2L-213ENST00000557542 ZCCHC6Q5VYS8 1495 aaKnown RBP34.2■■■■□ 3.06
GPATCH2L-213ENST00000557542 DCAF1Q9Y4B6 1507 aa34.06■■■■□ 3.04
GPATCH2L-213ENST00000557542 SHROOM4Q9ULL8 1493 aa33.86■■■■□ 3.01
GPATCH2L-213ENST00000557542 SCRIBQ14160 1630 aa33.81■■■■□ 3
GPATCH2L-213ENST00000557542 CC2D2AQ9P2K1 1620 aa33.56■■■□□ 2.96
GPATCH2L-213ENST00000557542 CECR2Q9BXF3 1484 aa33.54■■■□□ 2.96
GPATCH2L-213ENST00000557542 EIF4G1Q04637 1599 aaKnown RBP33.48■■■□□ 2.95
GPATCH2L-213ENST00000557542 NCAPD3P42695 1498 aa32.38■■■□□ 2.77
GPATCH2L-213ENST00000557542 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
GPATCH2L-213ENST00000557542 SMARCA4P51532 1647 aa32.21■■■□□ 2.75
GPATCH2L-213ENST00000557542 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
GPATCH2L-213ENST00000557542 ERCC6Q03468 1493 aa32.19■■■□□ 2.74
GPATCH2L-213ENST00000557542 DNAJC5Q9H3Z4 198 aa32.18■■■□□ 2.74
GPATCH2L-213ENST00000557542 HMGXB3Q12766 1538 aa32.14■■■□□ 2.74
GPATCH2L-213ENST00000557542 CUX2O14529 1486 aa32.1■■■□□ 2.73
GPATCH2L-213ENST00000557542 BAZ1AQ9NRL2 1556 aaPredicted RBP32.06■■■□□ 2.72
GPATCH2L-213ENST00000557542 BAZ1BQ9UIG0 1483 aaKnown RBP32■■■□□ 2.71
GPATCH2L-213ENST00000557542 NESP48681 1621 aa31.92■■■□□ 2.7
GPATCH2L-213ENST00000557542 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
GPATCH2L-213ENST00000557542 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
GPATCH2L-213ENST00000557542 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
GPATCH2L-213ENST00000557542 THOC2Q8NI27 1593 aaKnown RBP31.58■■■□□ 2.65
GPATCH2L-213ENST00000557542 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
GPATCH2L-213ENST00000557542 KIF21AQ7Z4S6 1674 aa31.44■■■□□ 2.62
GPATCH2L-213ENST00000557542 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
GPATCH2L-213ENST00000557542 WIZO95785 1651 aa31.38■■■□□ 2.61
GPATCH2L-213ENST00000557542 MRC2Q9UBG0 1479 aa31.26■■■□□ 2.59
GPATCH2L-213ENST00000557542 WDR62O43379 1518 aa31.15■■■□□ 2.58
GPATCH2L-213ENST00000557542 RSF1Q96T23 1441 aaPredicted RBP31.13■■■□□ 2.57
GPATCH2L-213ENST00000557542 CEP164Q9UPV0 1460 aa31.13■■■□□ 2.57
GPATCH2L-213ENST00000557542 FANCD2Q9BXW9 1451 aa31.08■■■□□ 2.57
GPATCH2L-213ENST00000557542 CFTRP13569 1480 aa31.03■■■□□ 2.56
GPATCH2L-213ENST00000557542 TOP2AP11388 1531 aaKnown RBP31.03■■■□□ 2.56
GPATCH2L-213ENST00000557542 TRIM41Q8WV44 630 aa30.81■■■□□ 2.52
GPATCH2L-213ENST00000557542 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
GPATCH2L-213ENST00000557542 CCDC88BA6NC98 1476 aa30.68■■■□□ 2.5
GPATCH2L-213ENST00000557542 OSCARQ8IYS5 282 aa30.64■■■□□ 2.5
GPATCH2L-213ENST00000557542 PRDM2Q13029 1718 aa30.59■■■□□ 2.49
GPATCH2L-213ENST00000557542 IFT140Q96RY7 1462 aa30.5■■■□□ 2.47
GPATCH2L-213ENST00000557542 TOPBP1Q92547 1522 aa30.46■■■□□ 2.47
GPATCH2L-213ENST00000557542 ZNF608Q9ULD9 1512 aaPredicted RBP30.45■■■□□ 2.47
GPATCH2L-213ENST00000557542 ABCC8Q09428 1581 aa30.38■■■□□ 2.45
GPATCH2L-213ENST00000557542 DNMBPQ6XZF7 1577 aa30.33■■■□□ 2.45
GPATCH2L-213ENST00000557542 EIF4G3O43432 1585 aaKnown RBP30.26■■■□□ 2.43
GPATCH2L-213ENST00000557542 RIMBP3CA6NJZ7 1639 aa30.2■■■□□ 2.43
GPATCH2L-213ENST00000557542 RIMBP3BA6NNM3 1639 aa30.2■■■□□ 2.43
GPATCH2L-213ENST00000557542 RIMBP3Q9UFD9 1639 aa30.2■■■□□ 2.43
GPATCH2L-213ENST00000557542 AQRO60306 1485 aaKnown RBP eCLIP30.18■■■□□ 2.42
GPATCH2L-213ENST00000557542 TARBP1Q13395 1621 aaKnown RBP30.15■■■□□ 2.42
GPATCH2L-213ENST00000557542 POLA1P09884 1462 aaPredicted RBP30.15■■■□□ 2.42
GPATCH2L-213ENST00000557542 ARHGEF11O15085 1522 aa30.13■■■□□ 2.41
GPATCH2L-213ENST00000557542 FBLN2P98095 1184 aa30.07■■■□□ 2.4
GPATCH2L-213ENST00000557542 RAD54L2Q9Y4B4 1467 aa30.06■■■□□ 2.4
GPATCH2L-213ENST00000557542 SOGA1O94964 1423 aa30.03■■■□□ 2.4
GPATCH2L-213ENST00000557542 TDRD9Q8NDG6 1382 aaKnown RBP30■■■□□ 2.39
GPATCH2L-213ENST00000557542 CHD1O14646 1710 aa29.99■■■□□ 2.39
GPATCH2L-213ENST00000557542 CYB5RLQ6IPT4 315 aa29.96■■■□□ 2.39
GPATCH2L-213ENST00000557542 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
GPATCH2L-213ENST00000557542 CUX1P39880 1505 aa29.9■■■□□ 2.38
GPATCH2L-213ENST00000557542 SNAPC4Q5SXM2 1469 aa29.87■■■□□ 2.37
GPATCH2L-213ENST00000557542 WDR97A6NE52 1622 aa29.85■■■□□ 2.37
GPATCH2L-213ENST00000557542 ARAP1Q96P48 1450 aa29.83■■■□□ 2.37
GPATCH2L-213ENST00000557542 CHMP7Q8WUX9 453 aaPredicted RBP29.81■■■□□ 2.36
GPATCH2L-213ENST00000557542 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
GPATCH2L-213ENST00000557542 MAGI1Q96QZ7 1491 aaPredicted RBP29.78■■■□□ 2.36
GPATCH2L-213ENST00000557542 SUPT5HO00267 1087 aaKnown RBP29.77■■■□□ 2.36
GPATCH2L-213ENST00000557542 SYNJ1O43426 1573 aa29.7■■■□□ 2.35
GPATCH2L-213ENST00000557542 CLASP1Q7Z460 1538 aa29.7■■■□□ 2.34
GPATCH2L-213ENST00000557542 TRHP20396 242 aaPredicted RBP29.69■■■□□ 2.34
GPATCH2L-213ENST00000557542 SYNJ2O15056 1496 aa29.68■■■□□ 2.34
GPATCH2L-213ENST00000557542 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
GPATCH2L-213ENST00000557542 ABCA10Q8WWZ4 1543 aa29.6■■■□□ 2.33
GPATCH2L-213ENST00000557542 PBRM1Q86U86 1689 aa29.57■■■□□ 2.32
GPATCH2L-213ENST00000557542 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
GPATCH2L-213ENST00000557542 WRNQ14191 1432 aaPredicted RBP eCLIP29.5■■■□□ 2.31
GPATCH2L-213ENST00000557542 GRIN2AQ12879 1464 aa29.39■■■□□ 2.3
GPATCH2L-213ENST00000557542 TOP2BQ02880 1626 aa29.37■■■□□ 2.29
GPATCH2L-213ENST00000557542 BIVM-ERCC5R4GMW8 1640 aa29.34■■■□□ 2.29
GPATCH2L-213ENST00000557542 ADAMTS12P58397 1594 aa29.34■■■□□ 2.29
GPATCH2L-213ENST00000557542 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
GPATCH2L-213ENST00000557542 NUP160Q12769 1436 aa29.28■■■□□ 2.28
GPATCH2L-213ENST00000557542 CEP170Q5SW79 1584 aa29.26■■■□□ 2.27
GPATCH2L-213ENST00000557542 ERCC6L2Q5T890 1561 aa29.23■■■□□ 2.27
GPATCH2L-213ENST00000557542 ERICH3Q5RHP9 1530 aa29.22■■■□□ 2.27
GPATCH2L-213ENST00000557542 SHROOM2Q13796 1616 aa29.11■■■□□ 2.25
GPATCH2L-213ENST00000557542 PRG4Q92954 1404 aaPredicted RBP29.04■■■□□ 2.24
GPATCH2L-213ENST00000557542 JPH4Q96JJ6 628 aa29■■■□□ 2.23
GPATCH2L-213ENST00000557542 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
GPATCH2L-213ENST00000557542 AEBP2Q6ZN18 517 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms