RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 AEBP2Q6ZN18 517 aaPredicted RBP27.87■■■□□ 2.05
PSMC6-215ENST00000557517 CHIC1Q5VXU3 224 aa26.36■■□□□ 1.81
PSMC6-215ENST00000557517 NISCHQ9Y2I1 1504 aa26.17■■□□□ 1.78
PSMC6-215ENST00000557517 SENP3Q9H4L4 574 aaPredicted RBP23.89■■□□□ 1.41
PSMC6-215ENST00000557517 ABCC9O60706 1549 aa23.6■■□□□ 1.37
PSMC6-215ENST00000557517 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
PSMC6-215ENST00000557517 CCDC180Q9P1Z9 1646 aa23.29■■□□□ 1.32
PSMC6-215ENST00000557517 DNAJC5BQ9UF47 199 aa22.53■■□□□ 1.2
PSMC6-215ENST00000557517 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
PSMC6-215ENST00000557517 FOXD1Q16676 465 aa22.22■■□□□ 1.15
PSMC6-215ENST00000557517 NACADO15069 1562 aa22.09■■□□□ 1.13
PSMC6-215ENST00000557517 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
PSMC6-215ENST00000557517 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
PSMC6-215ENST00000557517 UNC13AQ9UPW8 1703 aa21.86■■□□□ 1.09
PSMC6-215ENST00000557517 PABPN1Q86U42 306 aaKnown RBP eCLIP21.85■■□□□ 1.09
PSMC6-215ENST00000557517 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
PSMC6-215ENST00000557517 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
PSMC6-215ENST00000557517 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
PSMC6-215ENST00000557517 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
PSMC6-215ENST00000557517 CC2D2AQ9P2K1 1620 aa21.34■■□□□ 1.01
PSMC6-215ENST00000557517 CECR2Q9BXF3 1484 aa21.32■■□□□ 1
PSMC6-215ENST00000557517 EIF4G1Q04637 1599 aaKnown RBP21.2■□□□□ 0.98
PSMC6-215ENST00000557517 SCRIBQ14160 1630 aa21.18■□□□□ 0.98
PSMC6-215ENST00000557517 PLPPR3Q6T4P5 718 aa21.03■□□□□ 0.96
PSMC6-215ENST00000557517 DNAJC5Q9H3Z4 198 aa21.02■□□□□ 0.96
PSMC6-215ENST00000557517 MSH5O43196 834 aa20.93■□□□□ 0.94
PSMC6-215ENST00000557517 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
PSMC6-215ENST00000557517 POTEDQ86YR6 584 aa20.64■□□□□ 0.89
PSMC6-215ENST00000557517 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
PSMC6-215ENST00000557517 ADRA2BP18089 450 aa20.61■□□□□ 0.89
PSMC6-215ENST00000557517 CUX2O14529 1486 aa20.58■□□□□ 0.89
PSMC6-215ENST00000557517 NCAPD3P42695 1498 aa20.46■□□□□ 0.87
PSMC6-215ENST00000557517 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
PSMC6-215ENST00000557517 ATAD2BQ9ULI0 1458 aa20.37■□□□□ 0.85
PSMC6-215ENST00000557517 SMARCA4P51532 1647 aa20.27■□□□□ 0.84
PSMC6-215ENST00000557517 BAZ1AQ9NRL2 1556 aaPredicted RBP20.26■□□□□ 0.83
PSMC6-215ENST00000557517 SMARCA2P51531 1590 aa20.25■□□□□ 0.83
PSMC6-215ENST00000557517 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
PSMC6-215ENST00000557517 NESP48681 1621 aa20.16■□□□□ 0.82
PSMC6-215ENST00000557517 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
PSMC6-215ENST00000557517 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
PSMC6-215ENST00000557517 BAZ1BQ9UIG0 1483 aaKnown RBP20.12■□□□□ 0.81
PSMC6-215ENST00000557517 THOC2Q8NI27 1593 aaKnown RBP20.11■□□□□ 0.81
PSMC6-215ENST00000557517 LAMC3Q9Y6N6 1575 aa20■□□□□ 0.79
PSMC6-215ENST00000557517 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
PSMC6-215ENST00000557517 RSF1Q96T23 1441 aaPredicted RBP19.87■□□□□ 0.77
PSMC6-215ENST00000557517 PDS5BQ9NTI5 1447 aa19.86■□□□□ 0.77
PSMC6-215ENST00000557517 CADPSQ9ULU8 1353 aa19.85■□□□□ 0.77
PSMC6-215ENST00000557517 WIZO95785 1651 aa19.81■□□□□ 0.76
PSMC6-215ENST00000557517 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
PSMC6-215ENST00000557517 MRC2Q9UBG0 1479 aa19.73■□□□□ 0.75
PSMC6-215ENST00000557517 WDR62O43379 1518 aa19.73■□□□□ 0.75
PSMC6-215ENST00000557517 CFTRP13569 1480 aa19.63■□□□□ 0.73
PSMC6-215ENST00000557517 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
PSMC6-215ENST00000557517 CEP164Q9UPV0 1460 aa19.55■□□□□ 0.72
PSMC6-215ENST00000557517 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
PSMC6-215ENST00000557517 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
PSMC6-215ENST00000557517 OSCARQ8IYS5 282 aa19.48■□□□□ 0.71
PSMC6-215ENST00000557517 URB2Q14146 1524 aaKnown RBP19.38■□□□□ 0.69
PSMC6-215ENST00000557517 RIMBP3CA6NJZ7 1639 aa19.34■□□□□ 0.69
PSMC6-215ENST00000557517 RIMBP3BA6NNM3 1639 aa19.34■□□□□ 0.69
PSMC6-215ENST00000557517 RIMBP3Q9UFD9 1639 aa19.34■□□□□ 0.69
PSMC6-215ENST00000557517 PRDM2Q13029 1718 aa19.24■□□□□ 0.67
PSMC6-215ENST00000557517 ARHGEF11O15085 1522 aa19.24■□□□□ 0.67
PSMC6-215ENST00000557517 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
PSMC6-215ENST00000557517 IFT140Q96RY7 1462 aa19.2■□□□□ 0.66
PSMC6-215ENST00000557517 ZNF608Q9ULD9 1512 aaPredicted RBP19.19■□□□□ 0.66
PSMC6-215ENST00000557517 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
PSMC6-215ENST00000557517 SUPT5HO00267 1087 aaKnown RBP19.11■□□□□ 0.65
PSMC6-215ENST00000557517 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
PSMC6-215ENST00000557517 DNMBPQ6XZF7 1577 aa19.06■□□□□ 0.64
PSMC6-215ENST00000557517 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
PSMC6-215ENST00000557517 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
PSMC6-215ENST00000557517 CHD1O14646 1710 aa19.03■□□□□ 0.64
PSMC6-215ENST00000557517 POLA1P09884 1462 aaPredicted RBP19■□□□□ 0.63
PSMC6-215ENST00000557517 TARBP1Q13395 1621 aaKnown RBP18.99■□□□□ 0.63
PSMC6-215ENST00000557517 AQRO60306 1485 aaKnown RBP eCLIP18.98■□□□□ 0.63
PSMC6-215ENST00000557517 SOGA1O94964 1423 aa18.98■□□□□ 0.63
PSMC6-215ENST00000557517 MAPK8IP2Q13387 824 aaPredicted RBP18.96■□□□□ 0.63
PSMC6-215ENST00000557517 RAD54L2Q9Y4B4 1467 aa18.93■□□□□ 0.62
PSMC6-215ENST00000557517 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
PSMC6-215ENST00000557517 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
PSMC6-215ENST00000557517 TRHP20396 242 aaPredicted RBP18.91■□□□□ 0.62
PSMC6-215ENST00000557517 CUX1P39880 1505 aa18.9■□□□□ 0.62
PSMC6-215ENST00000557517 FGD5Q6ZNL6 1462 aa18.89■□□□□ 0.61
PSMC6-215ENST00000557517 DMRT2Q9Y5R5 561 aa18.88■□□□□ 0.61
PSMC6-215ENST00000557517 FBLN2P98095 1184 aa18.83■□□□□ 0.6
PSMC6-215ENST00000557517 CLASP1Q7Z460 1538 aa18.83■□□□□ 0.6
PSMC6-215ENST00000557517 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
PSMC6-215ENST00000557517 CHMP7Q8WUX9 453 aaPredicted RBP18.76■□□□□ 0.59
PSMC6-215ENST00000557517 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
PSMC6-215ENST00000557517 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
PSMC6-215ENST00000557517 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
PSMC6-215ENST00000557517 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
PSMC6-215ENST00000557517 WRNQ14191 1432 aaPredicted RBP eCLIP18.72■□□□□ 0.59
PSMC6-215ENST00000557517 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
PSMC6-215ENST00000557517 GAPVD1Q14C86 1478 aa18.71■□□□□ 0.59
PSMC6-215ENST00000557517 SYNJ2O15056 1496 aa18.66■□□□□ 0.58
PSMC6-215ENST00000557517 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
PSMC6-215ENST00000557517 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms