RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 NISCHQ9Y2I1 1504 aa51.52■■■■■ 5.84
FOXA1-205ENST00000557418 CCDC180Q9P1Z9 1646 aa45.93■■■■■ 4.94
FOXA1-205ENST00000557418 ABCC9O60706 1549 aa45.52■■■■■ 4.88
FOXA1-205ENST00000557418 RB1CC1Q8TDY2 1594 aa43.53■■■■■ 4.56
FOXA1-205ENST00000557418 DCAF8L2P0C7V8 631 aa43.48■■■■■ 4.55
FOXA1-205ENST00000557418 NACADO15069 1562 aa43.37■■■■■ 4.53
FOXA1-205ENST00000557418 MYO15BQ96JP2 1530 aa42.91■■■■■ 4.46
FOXA1-205ENST00000557418 ZCCHC6Q5VYS8 1495 aaKnown RBP42.75■■■■■ 4.43
FOXA1-205ENST00000557418 DCAF1Q9Y4B6 1507 aa42.56■■■■■ 4.4
FOXA1-205ENST00000557418 PABPN1Q86U42 306 aaKnown RBP eCLIP42.54■■■■■ 4.4
FOXA1-205ENST00000557418 UNC13AQ9UPW8 1703 aa42.5■■■■■ 4.39
FOXA1-205ENST00000557418 DNAJC5BQ9UF47 199 aa42.27■■■■■ 4.36
FOXA1-205ENST00000557418 BICRAQ9NZM4 1560 aa42.18■■■■■ 4.34
FOXA1-205ENST00000557418 SCRIBQ14160 1630 aa41.92■■■■■ 4.3
FOXA1-205ENST00000557418 SHROOM4Q9ULL8 1493 aa41.67■■■■■ 4.26
FOXA1-205ENST00000557418 EIF4G1Q04637 1599 aaKnown RBP41.13■■■■■ 4.18
FOXA1-205ENST00000557418 CC2D2AQ9P2K1 1620 aa41.11■■■■■ 4.17
FOXA1-205ENST00000557418 CECR2Q9BXF3 1484 aa40.94■■■■■ 4.14
FOXA1-205ENST00000557418 NCAPD3P42695 1498 aa40.04■■■■■ 4
FOXA1-205ENST00000557418 SMARCA4P51532 1647 aa40.04■■■■■ 4
FOXA1-205ENST00000557418 ATAD2BQ9ULI0 1458 aa39.99■■■■□ 3.99
FOXA1-205ENST00000557418 BAZ1AQ9NRL2 1556 aaPredicted RBP39.95■■■■□ 3.99
FOXA1-205ENST00000557418 SMARCA2P51531 1590 aa39.9■■■■□ 3.98
FOXA1-205ENST00000557418 HMGXB3Q12766 1538 aa39.72■■■■□ 3.95
FOXA1-205ENST00000557418 MROH2BQ7Z745 1585 aa39.69■■■■□ 3.94
FOXA1-205ENST00000557418 BAZ1BQ9UIG0 1483 aaKnown RBP39.63■■■■□ 3.94
FOXA1-205ENST00000557418 PEG3Q9GZU2 1588 aa39.63■■■■□ 3.93
FOXA1-205ENST00000557418 ERCC6Q03468 1493 aa39.28■■■■□ 3.88
FOXA1-205ENST00000557418 WIZO95785 1651 aa39.25■■■■□ 3.87
FOXA1-205ENST00000557418 NESP48681 1621 aa39.22■■■■□ 3.87
FOXA1-205ENST00000557418 RSF1Q96T23 1441 aaPredicted RBP39.1■■■■□ 3.85
FOXA1-205ENST00000557418 LAMC3Q9Y6N6 1575 aa39.03■■■■□ 3.84
FOXA1-205ENST00000557418 CUX2O14529 1486 aa38.98■■■■□ 3.83
FOXA1-205ENST00000557418 CADPSQ9ULU8 1353 aa38.89■■■■□ 3.82
FOXA1-205ENST00000557418 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
FOXA1-205ENST00000557418 TOP2AP11388 1531 aaKnown RBP38.76■■■■□ 3.8
FOXA1-205ENST00000557418 KIF21AQ7Z4S6 1674 aa38.71■■■■□ 3.79
FOXA1-205ENST00000557418 THOC2Q8NI27 1593 aaKnown RBP38.64■■■■□ 3.78
FOXA1-205ENST00000557418 CFTRP13569 1480 aa38.51■■■■□ 3.76
FOXA1-205ENST00000557418 DNAJC5Q9H3Z4 198 aa38.47■■■■□ 3.75
FOXA1-205ENST00000557418 MRC2Q9UBG0 1479 aa38.42■■■■□ 3.74
FOXA1-205ENST00000557418 FANCD2Q9BXW9 1451 aa38.41■■■■□ 3.74
FOXA1-205ENST00000557418 CEP164Q9UPV0 1460 aa38.39■■■■□ 3.74
FOXA1-205ENST00000557418 CCDC88BA6NC98 1476 aa38.38■■■■□ 3.73
FOXA1-205ENST00000557418 WDR62O43379 1518 aa38.27■■■■□ 3.72
FOXA1-205ENST00000557418 PRDM2Q13029 1718 aa38.11■■■■□ 3.69
FOXA1-205ENST00000557418 URB2Q14146 1524 aaKnown RBP38.02■■■■□ 3.68
FOXA1-205ENST00000557418 SUPT5HO00267 1087 aaKnown RBP37.91■■■■□ 3.66
FOXA1-205ENST00000557418 ABCC8Q09428 1581 aa37.74■■■■□ 3.63
FOXA1-205ENST00000557418 TOPBP1Q92547 1522 aa37.72■■■■□ 3.63
FOXA1-205ENST00000557418 IFT140Q96RY7 1462 aa37.62■■■■□ 3.61
FOXA1-205ENST00000557418 DNMBPQ6XZF7 1577 aa37.62■■■■□ 3.61
FOXA1-205ENST00000557418 ZNF608Q9ULD9 1512 aaPredicted RBP37.48■■■■□ 3.59
FOXA1-205ENST00000557418 OSCARQ8IYS5 282 aa37.44■■■■□ 3.58
FOXA1-205ENST00000557418 POLA1P09884 1462 aaPredicted RBP37.37■■■■□ 3.57
FOXA1-205ENST00000557418 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.56
FOXA1-205ENST00000557418 SOGA1O94964 1423 aa37.29■■■■□ 3.56
FOXA1-205ENST00000557418 AQRO60306 1485 aaKnown RBP eCLIP37.26■■■■□ 3.55
FOXA1-205ENST00000557418 RAD54L2Q9Y4B4 1467 aa37.26■■■■□ 3.55
FOXA1-205ENST00000557418 CUX1P39880 1505 aa37.25■■■■□ 3.55
FOXA1-205ENST00000557418 EIF4G3O43432 1585 aaKnown RBP37.25■■■■□ 3.55
FOXA1-205ENST00000557418 FGD5Q6ZNL6 1462 aa37.21■■■■□ 3.55
FOXA1-205ENST00000557418 TDRD9Q8NDG6 1382 aaKnown RBP37.15■■■■□ 3.54
FOXA1-205ENST00000557418 TRIM41Q8WV44 630 aa37.03■■■■□ 3.52
FOXA1-205ENST00000557418 FBLN2P98095 1184 aa37.02■■■■□ 3.52
FOXA1-205ENST00000557418 WDR97A6NE52 1622 aa36.97■■■■□ 3.51
FOXA1-205ENST00000557418 CHD1O14646 1710 aa36.9■■■■□ 3.5
FOXA1-205ENST00000557418 WRNQ14191 1432 aaPredicted RBP eCLIP36.88■■■■□ 3.49
FOXA1-205ENST00000557418 GRIN2BQ13224 1484 aa36.86■■■■□ 3.49
FOXA1-205ENST00000557418 SNAPC4Q5SXM2 1469 aa36.85■■■■□ 3.49
FOXA1-205ENST00000557418 CHMP7Q8WUX9 453 aaPredicted RBP36.83■■■■□ 3.49
FOXA1-205ENST00000557418 ABCA10Q8WWZ4 1543 aa36.82■■■■□ 3.48
FOXA1-205ENST00000557418 GAPVD1Q14C86 1478 aa36.82■■■■□ 3.48
FOXA1-205ENST00000557418 TOP2BQ02880 1626 aa36.8■■■■□ 3.48
FOXA1-205ENST00000557418 MAGI1Q96QZ7 1491 aaPredicted RBP36.78■■■■□ 3.48
FOXA1-205ENST00000557418 BIVM-ERCC5R4GMW8 1640 aa36.77■■■■□ 3.48
FOXA1-205ENST00000557418 SYNJ1O43426 1573 aa36.75■■■■□ 3.47
FOXA1-205ENST00000557418 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
FOXA1-205ENST00000557418 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
FOXA1-205ENST00000557418 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
FOXA1-205ENST00000557418 PBRM1Q86U86 1689 aa36.68■■■■□ 3.46
FOXA1-205ENST00000557418 ARHGEF11O15085 1522 aa36.68■■■■□ 3.46
FOXA1-205ENST00000557418 SYNJ2O15056 1496 aa36.66■■■■□ 3.46
FOXA1-205ENST00000557418 ABCA5Q8WWZ7 1642 aa36.66■■■■□ 3.46
FOXA1-205ENST00000557418 CYB5RLQ6IPT4 315 aa36.54■■■■□ 3.44
FOXA1-205ENST00000557418 CLASP1Q7Z460 1538 aa36.47■■■■□ 3.43
FOXA1-205ENST00000557418 FHAD1B1AJZ9 1412 aa36.37■■■■□ 3.41
FOXA1-205ENST00000557418 ERICH3Q5RHP9 1530 aa36.37■■■■□ 3.41
FOXA1-205ENST00000557418 GRIN2AQ12879 1464 aa36.36■■■■□ 3.41
FOXA1-205ENST00000557418 ARAP1Q96P48 1450 aa36.35■■■■□ 3.41
FOXA1-205ENST00000557418 ADAMTS12P58397 1594 aa36.35■■■■□ 3.41
FOXA1-205ENST00000557418 NUP160Q12769 1436 aa36.21■■■■□ 3.39
FOXA1-205ENST00000557418 KIF27Q86VH2 1401 aa36.17■■■■□ 3.38
FOXA1-205ENST00000557418 CEP170Q5SW79 1584 aa36.17■■■■□ 3.38
FOXA1-205ENST00000557418 IGF1RP08069 1367 aa36.11■■■■□ 3.37
FOXA1-205ENST00000557418 JPH4Q96JJ6 628 aa35.99■■■■□ 3.35
FOXA1-205ENST00000557418 TRHP20396 242 aaPredicted RBP35.98■■■■□ 3.35
FOXA1-205ENST00000557418 ERCC6L2Q5T890 1561 aa35.96■■■■□ 3.35
FOXA1-205ENST00000557418 SHROOM2Q13796 1616 aa35.94■■■■□ 3.34
FOXA1-205ENST00000557418 CUL7Q14999 1698 aa35.93■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms