RNA–Protein interactions for RNA: ENST00000557361.5

SERPINA1-218, Transcript of serpin family A member 1, humanhuman

TSL 5

Gene SERPINA1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-218ENST00000557361 NISCHQ9Y2I1 1504 aa31.72■■■□□ 2.67
SERPINA1-218ENST00000557361 ABCC9O60706 1549 aa30.24■■■□□ 2.43
SERPINA1-218ENST00000557361 DNAJC5BQ9UF47 199 aa29.32■■■□□ 2.28
SERPINA1-218ENST00000557361 CCDC180Q9P1Z9 1646 aa29■■■□□ 2.23
SERPINA1-218ENST00000557361 RB1CC1Q8TDY2 1594 aa28.22■■■□□ 2.11
SERPINA1-218ENST00000557361 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
SERPINA1-218ENST00000557361 DNAJC5Q9H3Z4 198 aa27.82■■■□□ 2.04
SERPINA1-218ENST00000557361 NACADO15069 1562 aa27.69■■■□□ 2.02
SERPINA1-218ENST00000557361 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
SERPINA1-218ENST00000557361 DCAF8L2P0C7V8 631 aa27.53■■■□□ 2
SERPINA1-218ENST00000557361 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
SERPINA1-218ENST00000557361 CECR2Q9BXF3 1484 aa27.33■■□□□ 1.97
SERPINA1-218ENST00000557361 CC2D2AQ9P2K1 1620 aa27.21■■□□□ 1.95
SERPINA1-218ENST00000557361 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
SERPINA1-218ENST00000557361 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
SERPINA1-218ENST00000557361 MYO15BQ96JP2 1530 aa26.81■■□□□ 1.88
SERPINA1-218ENST00000557361 CUX2O14529 1486 aa26.49■■□□□ 1.83
SERPINA1-218ENST00000557361 SCRIBQ14160 1630 aa26.44■■□□□ 1.82
SERPINA1-218ENST00000557361 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
SERPINA1-218ENST00000557361 ERCC6Q03468 1493 aa26.25■■□□□ 1.79
SERPINA1-218ENST00000557361 DCAF1Q9Y4B6 1507 aa26.05■■□□□ 1.76
SERPINA1-218ENST00000557361 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
SERPINA1-218ENST00000557361 NESP48681 1621 aa25.6■■□□□ 1.69
SERPINA1-218ENST00000557361 NCAPD3P42695 1498 aa25.54■■□□□ 1.68
SERPINA1-218ENST00000557361 THOC2Q8NI27 1593 aaKnown RBP25.54■■□□□ 1.68
SERPINA1-218ENST00000557361 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
SERPINA1-218ENST00000557361 ATAD2BQ9ULI0 1458 aa25.33■■□□□ 1.65
SERPINA1-218ENST00000557361 HMGXB3Q12766 1538 aa25.27■■□□□ 1.64
SERPINA1-218ENST00000557361 KIF21AQ7Z4S6 1674 aa25.26■■□□□ 1.63
SERPINA1-218ENST00000557361 LAMC3Q9Y6N6 1575 aa25.21■■□□□ 1.63
SERPINA1-218ENST00000557361 BAZ1AQ9NRL2 1556 aaPredicted RBP25.18■■□□□ 1.62
SERPINA1-218ENST00000557361 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
SERPINA1-218ENST00000557361 PDS5BQ9NTI5 1447 aa25.13■■□□□ 1.61
SERPINA1-218ENST00000557361 BAZ1BQ9UIG0 1483 aaKnown RBP25.09■■□□□ 1.61
SERPINA1-218ENST00000557361 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
SERPINA1-218ENST00000557361 SMARCA4P51532 1647 aa25.03■■□□□ 1.6
SERPINA1-218ENST00000557361 MRC2Q9UBG0 1479 aa24.98■■□□□ 1.59
SERPINA1-218ENST00000557361 RIMBP3CA6NJZ7 1639 aa24.93■■□□□ 1.58
SERPINA1-218ENST00000557361 RIMBP3BA6NNM3 1639 aa24.93■■□□□ 1.58
SERPINA1-218ENST00000557361 RIMBP3Q9UFD9 1639 aa24.93■■□□□ 1.58
SERPINA1-218ENST00000557361 WDR62O43379 1518 aa24.91■■□□□ 1.58
SERPINA1-218ENST00000557361 TRHP20396 242 aaPredicted RBP24.88■■□□□ 1.57
SERPINA1-218ENST00000557361 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
SERPINA1-218ENST00000557361 ARHGEF11O15085 1522 aa24.71■■□□□ 1.55
SERPINA1-218ENST00000557361 PEG3Q9GZU2 1588 aa24.7■■□□□ 1.54
SERPINA1-218ENST00000557361 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
SERPINA1-218ENST00000557361 CEP164Q9UPV0 1460 aa24.67■■□□□ 1.54
SERPINA1-218ENST00000557361 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SERPINA1-218ENST00000557361 MROH2BQ7Z745 1585 aa24.45■■□□□ 1.5
SERPINA1-218ENST00000557361 ARAP1Q96P48 1450 aa24.37■■□□□ 1.49
SERPINA1-218ENST00000557361 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
SERPINA1-218ENST00000557361 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
SERPINA1-218ENST00000557361 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
SERPINA1-218ENST00000557361 CFTRP13569 1480 aa24.19■■□□□ 1.46
SERPINA1-218ENST00000557361 CHD1O14646 1710 aa24.18■■□□□ 1.46
SERPINA1-218ENST00000557361 FBLN2P98095 1184 aa24.14■■□□□ 1.45
SERPINA1-218ENST00000557361 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
SERPINA1-218ENST00000557361 WIZO95785 1651 aa24.14■■□□□ 1.45
SERPINA1-218ENST00000557361 EIF4G3O43432 1585 aaKnown RBP24.09■■□□□ 1.45
SERPINA1-218ENST00000557361 ILDR1Q86SU0 546 aaPredicted RBP24.06■■□□□ 1.44
SERPINA1-218ENST00000557361 PRDM2Q13029 1718 aa23.93■■□□□ 1.42
SERPINA1-218ENST00000557361 AQRO60306 1485 aaKnown RBP eCLIP23.92■■□□□ 1.42
SERPINA1-218ENST00000557361 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
SERPINA1-218ENST00000557361 CLASP1Q7Z460 1538 aa23.78■■□□□ 1.4
SERPINA1-218ENST00000557361 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
SERPINA1-218ENST00000557361 TARBP1Q13395 1621 aaKnown RBP23.74■■□□□ 1.39
SERPINA1-218ENST00000557361 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
SERPINA1-218ENST00000557361 TOP2AP11388 1531 aaKnown RBP23.72■■□□□ 1.39
SERPINA1-218ENST00000557361 DNMBPQ6XZF7 1577 aa23.71■■□□□ 1.39
SERPINA1-218ENST00000557361 CHMP7Q8WUX9 453 aaPredicted RBP23.7■■□□□ 1.38
SERPINA1-218ENST00000557361 GAPVD1Q14C86 1478 aa23.68■■□□□ 1.38
SERPINA1-218ENST00000557361 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
SERPINA1-218ENST00000557361 TDRD9Q8NDG6 1382 aaKnown RBP23.6■■□□□ 1.37
SERPINA1-218ENST00000557361 POLA1P09884 1462 aaPredicted RBP23.57■■□□□ 1.36
SERPINA1-218ENST00000557361 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
SERPINA1-218ENST00000557361 MAGI1Q96QZ7 1491 aaPredicted RBP23.5■■□□□ 1.35
SERPINA1-218ENST00000557361 KDM4FA0A1W2PPD8 638 aa23.49■■□□□ 1.35
SERPINA1-218ENST00000557361 KIF13AQ9H1H9 1805 aa23.48■■□□□ 1.35
SERPINA1-218ENST00000557361 SUPT5HO00267 1087 aaKnown RBP23.48■■□□□ 1.35
SERPINA1-218ENST00000557361 SOGA1O94964 1423 aa23.48■■□□□ 1.35
SERPINA1-218ENST00000557361 CCDC88BA6NC98 1476 aa23.46■■□□□ 1.35
SERPINA1-218ENST00000557361 SYNJ2O15056 1496 aa23.45■■□□□ 1.34
SERPINA1-218ENST00000557361 WDR97A6NE52 1622 aa23.41■■□□□ 1.34
SERPINA1-218ENST00000557361 GRIN2BQ13224 1484 aa23.4■■□□□ 1.34
SERPINA1-218ENST00000557361 ERCC6L2Q5T890 1561 aa23.35■■□□□ 1.33
SERPINA1-218ENST00000557361 FAM69CQ0P6D2 419 aa23.28■■□□□ 1.32
SERPINA1-218ENST00000557361 FGD5Q6ZNL6 1462 aa23.28■■□□□ 1.32
SERPINA1-218ENST00000557361 KDM6BO15054 1643 aa23.26■■□□□ 1.31
SERPINA1-218ENST00000557361 PBRM1Q86U86 1689 aa23.26■■□□□ 1.31
SERPINA1-218ENST00000557361 CEP170Q5SW79 1584 aa23.21■■□□□ 1.31
SERPINA1-218ENST00000557361 ABCC10Q5T3U5 1492 aa23.16■■□□□ 1.3
SERPINA1-218ENST00000557361 HECW2Q9P2P5 1572 aa23.14■■□□□ 1.29
SERPINA1-218ENST00000557361 NPM1P06748 294 aaKnown RBP eCLIP23.13■■□□□ 1.29
SERPINA1-218ENST00000557361 TSPOAP1O95153 1857 aa23.13■■□□□ 1.29
SERPINA1-218ENST00000557361 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
SERPINA1-218ENST00000557361 FBXO41Q8TF61 875 aa23.08■■□□□ 1.29
SERPINA1-218ENST00000557361 DIP2BQ9P265 1576 aa23.08■■□□□ 1.29
SERPINA1-218ENST00000557361 ADGRL1O94910 1474 aa23.06■■□□□ 1.28
SERPINA1-218ENST00000557361 SHROOM2Q13796 1616 aa23.04■■□□□ 1.28
SERPINA1-218ENST00000557361 CUX1P39880 1505 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms