RNA–Protein interactions for RNA: ENST00000557312.5

LINC01193-204, Transcript of long intergenic non-protein coding RNA 1193, humanhuman

TSL 3

Gene LINC01193, Length 537 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01193-204ENST00000557312 NISCHQ9Y2I1 1504 aa27.52■■■□□ 2
LINC01193-204ENST00000557312 CCDC180Q9P1Z9 1646 aa24.61■■□□□ 1.53
LINC01193-204ENST00000557312 ABCC9O60706 1549 aa24.51■■□□□ 1.51
LINC01193-204ENST00000557312 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
LINC01193-204ENST00000557312 NACADO15069 1562 aa23.18■■□□□ 1.3
LINC01193-204ENST00000557312 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
LINC01193-204ENST00000557312 UNC13AQ9UPW8 1703 aa22.96■■□□□ 1.27
LINC01193-204ENST00000557312 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
LINC01193-204ENST00000557312 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
LINC01193-204ENST00000557312 DNAJC5BQ9UF47 199 aa22.84■■□□□ 1.25
LINC01193-204ENST00000557312 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
LINC01193-204ENST00000557312 BICRAQ9NZM4 1560 aa22.73■■□□□ 1.23
LINC01193-204ENST00000557312 DCAF1Q9Y4B6 1507 aa22.67■■□□□ 1.22
LINC01193-204ENST00000557312 SCRIBQ14160 1630 aa22.54■■□□□ 1.2
LINC01193-204ENST00000557312 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
LINC01193-204ENST00000557312 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
LINC01193-204ENST00000557312 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
LINC01193-204ENST00000557312 CECR2Q9BXF3 1484 aa21.99■■□□□ 1.11
LINC01193-204ENST00000557312 SMARCA4P51532 1647 aa21.47■■□□□ 1.03
LINC01193-204ENST00000557312 ATAD2BQ9ULI0 1458 aa21.41■■□□□ 1.02
LINC01193-204ENST00000557312 NCAPD3P42695 1498 aa21.39■■□□□ 1.02
LINC01193-204ENST00000557312 BAZ1AQ9NRL2 1556 aaPredicted RBP21.32■■□□□ 1
LINC01193-204ENST00000557312 SMARCA2P51531 1590 aa21.3■■□□□ 1
LINC01193-204ENST00000557312 HMGXB3Q12766 1538 aa21.28■■□□□ 1
LINC01193-204ENST00000557312 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
LINC01193-204ENST00000557312 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
LINC01193-204ENST00000557312 BAZ1BQ9UIG0 1483 aaKnown RBP21.2■□□□□ 0.98
LINC01193-204ENST00000557312 NESP48681 1621 aa21.14■□□□□ 0.97
LINC01193-204ENST00000557312 WIZO95785 1651 aa21.06■□□□□ 0.96
LINC01193-204ENST00000557312 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
LINC01193-204ENST00000557312 CUX2O14529 1486 aa20.93■□□□□ 0.94
LINC01193-204ENST00000557312 LAMC3Q9Y6N6 1575 aa20.9■□□□□ 0.94
LINC01193-204ENST00000557312 KIF21AQ7Z4S6 1674 aa20.89■□□□□ 0.93
LINC01193-204ENST00000557312 THOC2Q8NI27 1593 aaKnown RBP20.88■□□□□ 0.93
LINC01193-204ENST00000557312 RSF1Q96T23 1441 aaPredicted RBP20.85■□□□□ 0.93
LINC01193-204ENST00000557312 CADPSQ9ULU8 1353 aa20.74■□□□□ 0.91
LINC01193-204ENST00000557312 TOP2AP11388 1531 aaKnown RBP20.73■□□□□ 0.91
LINC01193-204ENST00000557312 PDS5BQ9NTI5 1447 aa20.71■□□□□ 0.91
LINC01193-204ENST00000557312 DNAJC5Q9H3Z4 198 aa20.7■□□□□ 0.9
LINC01193-204ENST00000557312 MRC2Q9UBG0 1479 aa20.6■□□□□ 0.89
LINC01193-204ENST00000557312 WDR62O43379 1518 aa20.58■□□□□ 0.88
LINC01193-204ENST00000557312 CFTRP13569 1480 aa20.57■□□□□ 0.88
LINC01193-204ENST00000557312 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
LINC01193-204ENST00000557312 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
LINC01193-204ENST00000557312 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
LINC01193-204ENST00000557312 PRDM2Q13029 1718 aa20.47■□□□□ 0.87
LINC01193-204ENST00000557312 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
LINC01193-204ENST00000557312 TOPBP1Q92547 1522 aa20.22■□□□□ 0.83
LINC01193-204ENST00000557312 ZNF608Q9ULD9 1512 aaPredicted RBP20.17■□□□□ 0.82
LINC01193-204ENST00000557312 DNMBPQ6XZF7 1577 aa20.14■□□□□ 0.81
LINC01193-204ENST00000557312 IFT140Q96RY7 1462 aa20.11■□□□□ 0.81
LINC01193-204ENST00000557312 EIF4G3O43432 1585 aaKnown RBP20.07■□□□□ 0.8
LINC01193-204ENST00000557312 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
LINC01193-204ENST00000557312 TARBP1Q13395 1621 aaKnown RBP20.05■□□□□ 0.8
LINC01193-204ENST00000557312 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
LINC01193-204ENST00000557312 POLA1P09884 1462 aaPredicted RBP20.02■□□□□ 0.8
LINC01193-204ENST00000557312 RAD54L2Q9Y4B4 1467 aa19.99■□□□□ 0.79
LINC01193-204ENST00000557312 CUX1P39880 1505 aa19.97■□□□□ 0.79
LINC01193-204ENST00000557312 AQRO60306 1485 aaKnown RBP eCLIP19.97■□□□□ 0.79
LINC01193-204ENST00000557312 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
LINC01193-204ENST00000557312 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
LINC01193-204ENST00000557312 FGD5Q6ZNL6 1462 aa19.94■□□□□ 0.78
LINC01193-204ENST00000557312 CHD1O14646 1710 aa19.91■□□□□ 0.78
LINC01193-204ENST00000557312 SOGA1O94964 1423 aa19.87■□□□□ 0.77
LINC01193-204ENST00000557312 TDRD9Q8NDG6 1382 aaKnown RBP19.86■□□□□ 0.77
LINC01193-204ENST00000557312 WDR97A6NE52 1622 aa19.84■□□□□ 0.77
LINC01193-204ENST00000557312 RIMBP3CA6NJZ7 1639 aa19.84■□□□□ 0.77
LINC01193-204ENST00000557312 RIMBP3BA6NNM3 1639 aa19.84■□□□□ 0.77
LINC01193-204ENST00000557312 RIMBP3Q9UFD9 1639 aa19.84■□□□□ 0.77
LINC01193-204ENST00000557312 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
LINC01193-204ENST00000557312 ARHGEF11O15085 1522 aa19.76■□□□□ 0.75
LINC01193-204ENST00000557312 FBLN2P98095 1184 aa19.74■□□□□ 0.75
LINC01193-204ENST00000557312 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
LINC01193-204ENST00000557312 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
LINC01193-204ENST00000557312 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
LINC01193-204ENST00000557312 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
LINC01193-204ENST00000557312 GRIN2BQ13224 1484 aa19.67■□□□□ 0.74
LINC01193-204ENST00000557312 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
LINC01193-204ENST00000557312 GAPVD1Q14C86 1478 aa19.66■□□□□ 0.74
LINC01193-204ENST00000557312 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
LINC01193-204ENST00000557312 MAGI1Q96QZ7 1491 aaPredicted RBP19.65■□□□□ 0.74
LINC01193-204ENST00000557312 WRNQ14191 1432 aaPredicted RBP eCLIP19.64■□□□□ 0.73
LINC01193-204ENST00000557312 CLASP1Q7Z460 1538 aa19.64■□□□□ 0.73
LINC01193-204ENST00000557312 ARAP1Q96P48 1450 aa19.6■□□□□ 0.73
LINC01193-204ENST00000557312 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
LINC01193-204ENST00000557312 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
LINC01193-204ENST00000557312 CYB5RLQ6IPT4 315 aa19.55■□□□□ 0.72
LINC01193-204ENST00000557312 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
LINC01193-204ENST00000557312 GRIN2AQ12879 1464 aa19.47■□□□□ 0.71
LINC01193-204ENST00000557312 CEP170Q5SW79 1584 aa19.46■□□□□ 0.71
LINC01193-204ENST00000557312 ERCC6L2Q5T890 1561 aa19.44■□□□□ 0.7
LINC01193-204ENST00000557312 ERICH3Q5RHP9 1530 aa19.41■□□□□ 0.7
LINC01193-204ENST00000557312 NUP160Q12769 1436 aa19.39■□□□□ 0.69
LINC01193-204ENST00000557312 FHAD1B1AJZ9 1412 aa19.38■□□□□ 0.69
LINC01193-204ENST00000557312 SHROOM2Q13796 1616 aa19.32■□□□□ 0.68
LINC01193-204ENST00000557312 RUSC2Q8N2Y8 1516 aa19.26■□□□□ 0.67
LINC01193-204ENST00000557312 TRHP20396 242 aaPredicted RBP19.24■□□□□ 0.67
LINC01193-204ENST00000557312 KIF27Q86VH2 1401 aa19.21■□□□□ 0.67
LINC01193-204ENST00000557312 IGF1RP08069 1367 aa19.2■□□□□ 0.66
LINC01193-204ENST00000557312 CUL7Q14999 1698 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms