RNA–Protein interactions for RNA: ENST00000557300.1

FNTB-208, Transcript of farnesyltransferase, CAAX box, beta, humanhuman

TSL 2

Gene FNTB, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTB-208ENST00000557300 NISCHQ9Y2I1 1504 aa24.46■■□□□ 1.51
FNTB-208ENST00000557300 ABCC9O60706 1549 aa22.61■■□□□ 1.21
FNTB-208ENST00000557300 CCDC180Q9P1Z9 1646 aa22.14■■□□□ 1.14
FNTB-208ENST00000557300 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
FNTB-208ENST00000557300 RB1CC1Q8TDY2 1594 aa21.31■■□□□ 1
FNTB-208ENST00000557300 NACADO15069 1562 aa21.05■□□□□ 0.96
FNTB-208ENST00000557300 PABPN1Q86U42 306 aaKnown RBP eCLIP20.98■□□□□ 0.95
FNTB-208ENST00000557300 DCAF8L2P0C7V8 631 aa20.87■□□□□ 0.93
FNTB-208ENST00000557300 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
FNTB-208ENST00000557300 BICRAQ9NZM4 1560 aa20.71■□□□□ 0.91
FNTB-208ENST00000557300 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
FNTB-208ENST00000557300 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
FNTB-208ENST00000557300 CC2D2AQ9P2K1 1620 aa20.39■□□□□ 0.86
FNTB-208ENST00000557300 SHROOM4Q9ULL8 1493 aa20.37■□□□□ 0.85
FNTB-208ENST00000557300 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
FNTB-208ENST00000557300 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
FNTB-208ENST00000557300 SCRIBQ14160 1630 aa20.17■□□□□ 0.82
FNTB-208ENST00000557300 DCAF1Q9Y4B6 1507 aa20.17■□□□□ 0.82
FNTB-208ENST00000557300 DNAJC5Q9H3Z4 198 aa20.16■□□□□ 0.82
FNTB-208ENST00000557300 CUX2O14529 1486 aa19.66■□□□□ 0.74
FNTB-208ENST00000557300 ERCC6Q03468 1493 aa19.55■□□□□ 0.72
FNTB-208ENST00000557300 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
FNTB-208ENST00000557300 ATAD2BQ9ULI0 1458 aa19.32■□□□□ 0.68
FNTB-208ENST00000557300 NESP48681 1621 aa19.29■□□□□ 0.68
FNTB-208ENST00000557300 HMGXB3Q12766 1538 aa19.25■□□□□ 0.67
FNTB-208ENST00000557300 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
FNTB-208ENST00000557300 THOC2Q8NI27 1593 aaKnown RBP19.19■□□□□ 0.66
FNTB-208ENST00000557300 SMARCA4P51532 1647 aa19.18■□□□□ 0.66
FNTB-208ENST00000557300 BAZ1BQ9UIG0 1483 aaKnown RBP19.11■□□□□ 0.65
FNTB-208ENST00000557300 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
FNTB-208ENST00000557300 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
FNTB-208ENST00000557300 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
FNTB-208ENST00000557300 BAZ1AQ9NRL2 1556 aaPredicted RBP19.02■□□□□ 0.63
FNTB-208ENST00000557300 PEG3Q9GZU2 1588 aa18.98■□□□□ 0.63
FNTB-208ENST00000557300 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
FNTB-208ENST00000557300 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
FNTB-208ENST00000557300 MRC2Q9UBG0 1479 aa18.85■□□□□ 0.61
FNTB-208ENST00000557300 CADPSQ9ULU8 1353 aa18.82■□□□□ 0.6
FNTB-208ENST00000557300 WDR62O43379 1518 aa18.82■□□□□ 0.6
FNTB-208ENST00000557300 OSCARQ8IYS5 282 aa18.68■□□□□ 0.58
FNTB-208ENST00000557300 CEP164Q9UPV0 1460 aa18.68■□□□□ 0.58
FNTB-208ENST00000557300 FANCD2Q9BXW9 1451 aa18.62■□□□□ 0.57
FNTB-208ENST00000557300 WIZO95785 1651 aa18.6■□□□□ 0.57
FNTB-208ENST00000557300 CFTRP13569 1480 aa18.52■□□□□ 0.55
FNTB-208ENST00000557300 RIMBP3CA6NJZ7 1639 aa18.5■□□□□ 0.55
FNTB-208ENST00000557300 RIMBP3BA6NNM3 1639 aa18.5■□□□□ 0.55
FNTB-208ENST00000557300 RIMBP3Q9UFD9 1639 aa18.5■□□□□ 0.55
FNTB-208ENST00000557300 URB2Q14146 1524 aaKnown RBP18.49■□□□□ 0.55
FNTB-208ENST00000557300 ARHGEF11O15085 1522 aa18.39■□□□□ 0.54
FNTB-208ENST00000557300 ZNF608Q9ULD9 1512 aaPredicted RBP18.35■□□□□ 0.53
FNTB-208ENST00000557300 TOP2AP11388 1531 aaKnown RBP18.33■□□□□ 0.53
FNTB-208ENST00000557300 IFT140Q96RY7 1462 aa18.33■□□□□ 0.52
FNTB-208ENST00000557300 CYB5RLQ6IPT4 315 aa18.29■□□□□ 0.52
FNTB-208ENST00000557300 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
FNTB-208ENST00000557300 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
FNTB-208ENST00000557300 TRHP20396 242 aaPredicted RBP18.24■□□□□ 0.51
FNTB-208ENST00000557300 EIF4G3O43432 1585 aaKnown RBP18.22■□□□□ 0.51
FNTB-208ENST00000557300 TOPBP1Q92547 1522 aa18.22■□□□□ 0.51
FNTB-208ENST00000557300 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
FNTB-208ENST00000557300 CHD1O14646 1710 aa18.17■□□□□ 0.5
FNTB-208ENST00000557300 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
FNTB-208ENST00000557300 ABCC8Q09428 1581 aa18.13■□□□□ 0.49
FNTB-208ENST00000557300 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
FNTB-208ENST00000557300 DNMBPQ6XZF7 1577 aa18.11■□□□□ 0.49
FNTB-208ENST00000557300 FBLN2P98095 1184 aa18.1■□□□□ 0.49
FNTB-208ENST00000557300 TARBP1Q13395 1621 aaKnown RBP18.09■□□□□ 0.49
FNTB-208ENST00000557300 AEBP2Q6ZN18 517 aaPredicted RBP18.04■□□□□ 0.48
FNTB-208ENST00000557300 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
FNTB-208ENST00000557300 RAD54L2Q9Y4B4 1467 aa17.95■□□□□ 0.46
FNTB-208ENST00000557300 CLASP1Q7Z460 1538 aa17.95■□□□□ 0.46
FNTB-208ENST00000557300 TDRD9Q8NDG6 1382 aaKnown RBP17.94■□□□□ 0.46
FNTB-208ENST00000557300 SNAPC4Q5SXM2 1469 aa17.93■□□□□ 0.46
FNTB-208ENST00000557300 SOGA1O94964 1423 aa17.91■□□□□ 0.46
FNTB-208ENST00000557300 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
FNTB-208ENST00000557300 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
FNTB-208ENST00000557300 WDR97A6NE52 1622 aa17.86■□□□□ 0.45
FNTB-208ENST00000557300 MAGI1Q96QZ7 1491 aaPredicted RBP17.85■□□□□ 0.45
FNTB-208ENST00000557300 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
FNTB-208ENST00000557300 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
FNTB-208ENST00000557300 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
FNTB-208ENST00000557300 GAPVD1Q14C86 1478 aa17.8■□□□□ 0.44
FNTB-208ENST00000557300 CUX1P39880 1505 aa17.74■□□□□ 0.43
FNTB-208ENST00000557300 PBRM1Q86U86 1689 aa17.71■□□□□ 0.42
FNTB-208ENST00000557300 ERCC6L2Q5T890 1561 aa17.65■□□□□ 0.42
FNTB-208ENST00000557300 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
FNTB-208ENST00000557300 ABCA10Q8WWZ4 1543 aa17.59■□□□□ 0.41
FNTB-208ENST00000557300 GRIN2AQ12879 1464 aa17.58■□□□□ 0.41
FNTB-208ENST00000557300 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
FNTB-208ENST00000557300 NUP160Q12769 1436 aa17.54■□□□□ 0.4
FNTB-208ENST00000557300 KIF13AQ9H1H9 1805 aa17.52■□□□□ 0.4
FNTB-208ENST00000557300 ADAMTS12P58397 1594 aa17.52■□□□□ 0.39
FNTB-208ENST00000557300 SHROOM2Q13796 1616 aa17.5■□□□□ 0.39
FNTB-208ENST00000557300 FHAD1B1AJZ9 1412 aa17.44■□□□□ 0.38
FNTB-208ENST00000557300 WRNQ14191 1432 aaPredicted RBP eCLIP17.43■□□□□ 0.38
FNTB-208ENST00000557300 PRG4Q92954 1404 aaPredicted RBP17.41■□□□□ 0.38
FNTB-208ENST00000557300 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
FNTB-208ENST00000557300 ABCC10Q5T3U5 1492 aa17.38■□□□□ 0.37
FNTB-208ENST00000557300 ERICH3Q5RHP9 1530 aa17.36■□□□□ 0.37
FNTB-208ENST00000557300 JPH4Q96JJ6 628 aa17.35■□□□□ 0.37
FNTB-208ENST00000557300 BIVM-ERCC5R4GMW8 1640 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms