RNA–Protein interactions for RNA: ENST00000557259.5

PYM1-207, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

TSL 2 BASIC

Gene PYM1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-207ENST00000557259 NISCHQ9Y2I1 1504 aa26.68■■□□□ 1.86
PYM1-207ENST00000557259 CCDC180Q9P1Z9 1646 aa23.72■■□□□ 1.39
PYM1-207ENST00000557259 ABCC9O60706 1549 aa23.32■■□□□ 1.32
PYM1-207ENST00000557259 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
PYM1-207ENST00000557259 AEBP2Q6ZN18 517 aaPredicted RBP23.09■■□□□ 1.29
PYM1-207ENST00000557259 DCAF8L2P0C7V8 631 aa22.5■■□□□ 1.19
PYM1-207ENST00000557259 RB1CC1Q8TDY2 1594 aa22.47■■□□□ 1.19
PYM1-207ENST00000557259 NACADO15069 1562 aa22.45■■□□□ 1.18
PYM1-207ENST00000557259 MYO15BQ96JP2 1530 aa22.33■■□□□ 1.17
PYM1-207ENST00000557259 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
PYM1-207ENST00000557259 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
PYM1-207ENST00000557259 PABPN1Q86U42 306 aaKnown RBP eCLIP21.83■■□□□ 1.09
PYM1-207ENST00000557259 SHROOM4Q9ULL8 1493 aa21.66■■□□□ 1.06
PYM1-207ENST00000557259 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
PYM1-207ENST00000557259 BICRAQ9NZM4 1560 aa21.6■■□□□ 1.05
PYM1-207ENST00000557259 SCRIBQ14160 1630 aa21.55■■□□□ 1.04
PYM1-207ENST00000557259 DNAJC5BQ9UF47 199 aa21.47■■□□□ 1.03
PYM1-207ENST00000557259 EIF4G1Q04637 1599 aaKnown RBP21.14■□□□□ 0.98
PYM1-207ENST00000557259 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
PYM1-207ENST00000557259 CECR2Q9BXF3 1484 aa21.04■□□□□ 0.96
PYM1-207ENST00000557259 BAZ1AQ9NRL2 1556 aaPredicted RBP20.74■□□□□ 0.91
PYM1-207ENST00000557259 NCAPD3P42695 1498 aa20.74■□□□□ 0.91
PYM1-207ENST00000557259 SMARCA2P51531 1590 aa20.68■□□□□ 0.9
PYM1-207ENST00000557259 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
PYM1-207ENST00000557259 SMARCA4P51532 1647 aa20.65■□□□□ 0.9
PYM1-207ENST00000557259 HMGXB3Q12766 1538 aa20.55■□□□□ 0.88
PYM1-207ENST00000557259 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
PYM1-207ENST00000557259 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
PYM1-207ENST00000557259 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
PYM1-207ENST00000557259 MROH2BQ7Z745 1585 aa20.46■□□□□ 0.87
PYM1-207ENST00000557259 RSF1Q96T23 1441 aaPredicted RBP20.29■□□□□ 0.84
PYM1-207ENST00000557259 ERCC6Q03468 1493 aa20.24■□□□□ 0.83
PYM1-207ENST00000557259 WIZO95785 1651 aa20.18■□□□□ 0.82
PYM1-207ENST00000557259 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
PYM1-207ENST00000557259 PDS5BQ9NTI5 1447 aa20.16■□□□□ 0.82
PYM1-207ENST00000557259 LAMC3Q9Y6N6 1575 aa20.16■□□□□ 0.82
PYM1-207ENST00000557259 TOP2AP11388 1531 aaKnown RBP20.08■□□□□ 0.81
PYM1-207ENST00000557259 CUX2O14529 1486 aa20.07■□□□□ 0.8
PYM1-207ENST00000557259 NESP48681 1621 aa20.07■□□□□ 0.8
PYM1-207ENST00000557259 CFTRP13569 1480 aa19.95■□□□□ 0.78
PYM1-207ENST00000557259 CCDC88BA6NC98 1476 aa19.86■□□□□ 0.77
PYM1-207ENST00000557259 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
PYM1-207ENST00000557259 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
PYM1-207ENST00000557259 MRC2Q9UBG0 1479 aa19.83■□□□□ 0.76
PYM1-207ENST00000557259 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.76
PYM1-207ENST00000557259 THOC2Q8NI27 1593 aaKnown RBP19.76■□□□□ 0.75
PYM1-207ENST00000557259 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
PYM1-207ENST00000557259 WDR62O43379 1518 aa19.71■□□□□ 0.75
PYM1-207ENST00000557259 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
PYM1-207ENST00000557259 DNAJC5Q9H3Z4 198 aa19.63■□□□□ 0.73
PYM1-207ENST00000557259 PRDM2Q13029 1718 aa19.56■□□□□ 0.72
PYM1-207ENST00000557259 URB2Q14146 1524 aaKnown RBP19.55■□□□□ 0.72
PYM1-207ENST00000557259 IFT140Q96RY7 1462 aa19.48■□□□□ 0.71
PYM1-207ENST00000557259 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
PYM1-207ENST00000557259 DNMBPQ6XZF7 1577 aa19.44■□□□□ 0.7
PYM1-207ENST00000557259 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
PYM1-207ENST00000557259 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
PYM1-207ENST00000557259 SOGA1O94964 1423 aa19.33■□□□□ 0.68
PYM1-207ENST00000557259 POLA1P09884 1462 aaPredicted RBP19.29■□□□□ 0.68
PYM1-207ENST00000557259 ZNF608Q9ULD9 1512 aaPredicted RBP19.23■□□□□ 0.67
PYM1-207ENST00000557259 FGD5Q6ZNL6 1462 aa19.22■□□□□ 0.67
PYM1-207ENST00000557259 CUX1P39880 1505 aa19.21■□□□□ 0.67
PYM1-207ENST00000557259 WRNQ14191 1432 aaPredicted RBP eCLIP19.2■□□□□ 0.66
PYM1-207ENST00000557259 WDR97A6NE52 1622 aa19.2■□□□□ 0.66
PYM1-207ENST00000557259 AQRO60306 1485 aaKnown RBP eCLIP19.19■□□□□ 0.669e-7■■■■■ 31.2
PYM1-207ENST00000557259 TARBP1Q13395 1621 aaKnown RBP19.18■□□□□ 0.66
PYM1-207ENST00000557259 RAD54L2Q9Y4B4 1467 aa19.17■□□□□ 0.66
PYM1-207ENST00000557259 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
PYM1-207ENST00000557259 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
PYM1-207ENST00000557259 EIF4G3O43432 1585 aaKnown RBP19.12■□□□□ 0.65
PYM1-207ENST00000557259 FBLN2P98095 1184 aa19.12■□□□□ 0.65
PYM1-207ENST00000557259 CHMP7Q8WUX9 453 aaPredicted RBP19.11■□□□□ 0.65
PYM1-207ENST00000557259 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
PYM1-207ENST00000557259 ABCA10Q8WWZ4 1543 aa19.09■□□□□ 0.65
PYM1-207ENST00000557259 TOP2BQ02880 1626 aa19.07■□□□□ 0.64
PYM1-207ENST00000557259 GAPVD1Q14C86 1478 aa19.06■□□□□ 0.64
PYM1-207ENST00000557259 MAGI1Q96QZ7 1491 aaPredicted RBP19.06■□□□□ 0.64
PYM1-207ENST00000557259 BIVM-ERCC5R4GMW8 1640 aa19■□□□□ 0.63
PYM1-207ENST00000557259 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
PYM1-207ENST00000557259 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
PYM1-207ENST00000557259 SYNJ1O43426 1573 aa18.95■□□□□ 0.62
PYM1-207ENST00000557259 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
PYM1-207ENST00000557259 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
PYM1-207ENST00000557259 FHAD1B1AJZ9 1412 aa18.88■□□□□ 0.61
PYM1-207ENST00000557259 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
PYM1-207ENST00000557259 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
PYM1-207ENST00000557259 CHD1O14646 1710 aa18.83■□□□□ 0.6
PYM1-207ENST00000557259 PBRM1Q86U86 1689 aa18.82■□□□□ 0.6
PYM1-207ENST00000557259 ARHGEF11O15085 1522 aa18.79■□□□□ 0.6
PYM1-207ENST00000557259 GRIN2AQ12879 1464 aa18.79■□□□□ 0.6
PYM1-207ENST00000557259 CYB5RLQ6IPT4 315 aa18.77■□□□□ 0.6
PYM1-207ENST00000557259 IGF1RP08069 1367 aa18.76■□□□□ 0.59
PYM1-207ENST00000557259 ADAMTS12P58397 1594 aa18.73■□□□□ 0.59
PYM1-207ENST00000557259 RIMBP3CA6NJZ7 1639 aa18.73■□□□□ 0.59
PYM1-207ENST00000557259 RIMBP3BA6NNM3 1639 aa18.73■□□□□ 0.59
PYM1-207ENST00000557259 RIMBP3Q9UFD9 1639 aa18.73■□□□□ 0.59
PYM1-207ENST00000557259 CLASP1Q7Z460 1538 aa18.73■□□□□ 0.59
PYM1-207ENST00000557259 NUP160Q12769 1436 aa18.73■□□□□ 0.59
PYM1-207ENST00000557259 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
PYM1-207ENST00000557259 JPH4Q96JJ6 628 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms