RNA–Protein interactions for RNA: ENST00000557245.1

RBM23-228, Transcript of RNA binding motif protein 23, humanhuman

TSL 2

Gene RBM23, Length 387 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM23-228ENST00000557245 NISCHQ9Y2I1 1504 aa28.37■■■□□ 2.13
RBM23-228ENST00000557245 CCDC180Q9P1Z9 1646 aa25.64■■□□□ 1.7
RBM23-228ENST00000557245 ABCC9O60706 1549 aa25.56■■□□□ 1.68
RBM23-228ENST00000557245 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
RBM23-228ENST00000557245 NACADO15069 1562 aa24.16■■□□□ 1.46
RBM23-228ENST00000557245 DNAJC5BQ9UF47 199 aa23.99■■□□□ 1.43
RBM23-228ENST00000557245 UNC13AQ9UPW8 1703 aa23.94■■□□□ 1.42
RBM23-228ENST00000557245 MYO15BQ96JP2 1530 aa23.83■■□□□ 1.41
RBM23-228ENST00000557245 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
RBM23-228ENST00000557245 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
RBM23-228ENST00000557245 PABPN1Q86U42 306 aaKnown RBP eCLIP23.67■■□□□ 1.38
RBM23-228ENST00000557245 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
RBM23-228ENST00000557245 DCAF1Q9Y4B6 1507 aa23.48■■□□□ 1.35
RBM23-228ENST00000557245 SHROOM4Q9ULL8 1493 aa23.38■■□□□ 1.33
RBM23-228ENST00000557245 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
RBM23-228ENST00000557245 CC2D2AQ9P2K1 1620 aa23.16■■□□□ 1.3
RBM23-228ENST00000557245 EIF4G1Q04637 1599 aaKnown RBP23.09■■□□□ 1.29
RBM23-228ENST00000557245 CECR2Q9BXF3 1484 aa23.05■■□□□ 1.28
RBM23-228ENST00000557245 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
RBM23-228ENST00000557245 SMARCA4P51532 1647 aa22.2■■□□□ 1.15
RBM23-228ENST00000557245 ATAD2BQ9ULI0 1458 aa22.18■■□□□ 1.14
RBM23-228ENST00000557245 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
RBM23-228ENST00000557245 SMARCA2P51531 1590 aa22.16■■□□□ 1.14
RBM23-228ENST00000557245 CUX2O14529 1486 aa22.13■■□□□ 1.13
RBM23-228ENST00000557245 DNAJC5Q9H3Z4 198 aa22.11■■□□□ 1.13
RBM23-228ENST00000557245 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
RBM23-228ENST00000557245 BAZ1AQ9NRL2 1556 aaPredicted RBP22.05■■□□□ 1.12
RBM23-228ENST00000557245 PEG3Q9GZU2 1588 aa22.01■■□□□ 1.11
RBM23-228ENST00000557245 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
RBM23-228ENST00000557245 NESP48681 1621 aa21.95■■□□□ 1.1
RBM23-228ENST00000557245 THOC2Q8NI27 1593 aaKnown RBP21.87■■□□□ 1.09
RBM23-228ENST00000557245 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
RBM23-228ENST00000557245 LAMC3Q9Y6N6 1575 aa21.84■■□□□ 1.09
RBM23-228ENST00000557245 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
RBM23-228ENST00000557245 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
RBM23-228ENST00000557245 WIZO95785 1651 aa21.62■■□□□ 1.05
RBM23-228ENST00000557245 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
RBM23-228ENST00000557245 MRC2Q9UBG0 1479 aa21.5■■□□□ 1.03
RBM23-228ENST00000557245 WDR62O43379 1518 aa21.5■■□□□ 1.03
RBM23-228ENST00000557245 CEP164Q9UPV0 1460 aa21.39■■□□□ 1.01
RBM23-228ENST00000557245 TOP2AP11388 1531 aaKnown RBP21.34■■□□□ 1.01
RBM23-228ENST00000557245 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
RBM23-228ENST00000557245 CFTRP13569 1480 aa21.32■■□□□ 1
RBM23-228ENST00000557245 RSF1Q96T23 1441 aaPredicted RBP21.31■■□□□ 1
RBM23-228ENST00000557245 PRDM2Q13029 1718 aa21.3■■□□□ 1
RBM23-228ENST00000557245 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
RBM23-228ENST00000557245 TRIM41Q8WV44 630 aa21.05■□□□□ 0.96
RBM23-228ENST00000557245 CCDC88BA6NC98 1476 aa21.03■□□□□ 0.96
RBM23-228ENST00000557245 IFT140Q96RY7 1462 aa20.95■□□□□ 0.94
RBM23-228ENST00000557245 OSCARQ8IYS5 282 aa20.95■□□□□ 0.94
RBM23-228ENST00000557245 TOPBP1Q92547 1522 aa20.94■□□□□ 0.94
RBM23-228ENST00000557245 ZNF608Q9ULD9 1512 aaPredicted RBP20.92■□□□□ 0.94
RBM23-228ENST00000557245 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.94
RBM23-228ENST00000557245 DNMBPQ6XZF7 1577 aa20.89■□□□□ 0.94
RBM23-228ENST00000557245 RIMBP3CA6NJZ7 1639 aa20.87■□□□□ 0.93
RBM23-228ENST00000557245 RIMBP3BA6NNM3 1639 aa20.87■□□□□ 0.93
RBM23-228ENST00000557245 RIMBP3Q9UFD9 1639 aa20.87■□□□□ 0.93
RBM23-228ENST00000557245 ABCC8Q09428 1581 aa20.87■□□□□ 0.93
RBM23-228ENST00000557245 TARBP1Q13395 1621 aaKnown RBP20.82■□□□□ 0.92
RBM23-228ENST00000557245 CHD1O14646 1710 aa20.79■□□□□ 0.92
RBM23-228ENST00000557245 ARHGEF11O15085 1522 aa20.76■□□□□ 0.91
RBM23-228ENST00000557245 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
RBM23-228ENST00000557245 AQRO60306 1485 aaKnown RBP eCLIP20.67■□□□□ 0.9
RBM23-228ENST00000557245 WDR97A6NE52 1622 aa20.64■□□□□ 0.89
RBM23-228ENST00000557245 RAD54L2Q9Y4B4 1467 aa20.6■□□□□ 0.89
RBM23-228ENST00000557245 FGD5Q6ZNL6 1462 aa20.57■□□□□ 0.88
RBM23-228ENST00000557245 CUX1P39880 1505 aa20.56■□□□□ 0.88
RBM23-228ENST00000557245 ARAP1Q96P48 1450 aa20.56■□□□□ 0.88
RBM23-228ENST00000557245 SOGA1O94964 1423 aa20.54■□□□□ 0.88
RBM23-228ENST00000557245 SNAPC4Q5SXM2 1469 aa20.52■□□□□ 0.88
RBM23-228ENST00000557245 CLASP1Q7Z460 1538 aa20.51■□□□□ 0.87
RBM23-228ENST00000557245 TDRD9Q8NDG6 1382 aaKnown RBP20.5■□□□□ 0.87
RBM23-228ENST00000557245 MAGI1Q96QZ7 1491 aaPredicted RBP20.48■□□□□ 0.87
RBM23-228ENST00000557245 PBRM1Q86U86 1689 aa20.48■□□□□ 0.87
RBM23-228ENST00000557245 FBLN2P98095 1184 aa20.46■□□□□ 0.87
RBM23-228ENST00000557245 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
RBM23-228ENST00000557245 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
RBM23-228ENST00000557245 GRIN2BQ13224 1484 aa20.43■□□□□ 0.86
RBM23-228ENST00000557245 ABCA5Q8WWZ7 1642 aa20.4■□□□□ 0.86
RBM23-228ENST00000557245 SYNJ2O15056 1496 aa20.39■□□□□ 0.85
RBM23-228ENST00000557245 ABCA10Q8WWZ4 1543 aa20.34■□□□□ 0.85
RBM23-228ENST00000557245 GAPVD1Q14C86 1478 aa20.33■□□□□ 0.85
RBM23-228ENST00000557245 CHMP7Q8WUX9 453 aaPredicted RBP20.31■□□□□ 0.84
RBM23-228ENST00000557245 BIVM-ERCC5R4GMW8 1640 aa20.27■□□□□ 0.83
RBM23-228ENST00000557245 ADAMTS12P58397 1594 aa20.25■□□□□ 0.83
RBM23-228ENST00000557245 TRHP20396 242 aaPredicted RBP20.23■□□□□ 0.83
RBM23-228ENST00000557245 TOP2BQ02880 1626 aa20.23■□□□□ 0.83
RBM23-228ENST00000557245 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
RBM23-228ENST00000557245 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
RBM23-228ENST00000557245 CEP170Q5SW79 1584 aa20.17■□□□□ 0.82
RBM23-228ENST00000557245 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
RBM23-228ENST00000557245 ERCC6L2Q5T890 1561 aa20.14■□□□□ 0.81
RBM23-228ENST00000557245 SUPT5HO00267 1087 aaKnown RBP20.14■□□□□ 0.81
RBM23-228ENST00000557245 NUP160Q12769 1436 aa20.13■□□□□ 0.81
RBM23-228ENST00000557245 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
RBM23-228ENST00000557245 FHAD1B1AJZ9 1412 aa20.08■□□□□ 0.8
RBM23-228ENST00000557245 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
RBM23-228ENST00000557245 KIF13AQ9H1H9 1805 aa19.95■□□□□ 0.78
RBM23-228ENST00000557245 PRG4Q92954 1404 aaPredicted RBP19.88■□□□□ 0.77
RBM23-228ENST00000557245 CUL7Q14999 1698 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms