RNA–Protein interactions for RNA: ENST00000557196.1

AL049870.1-201, humanhuman

BASIC

Gene AL049870.1, Length 308 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049870.1-201ENST00000557196 NISCHQ9Y2I1 1504 aa23.8■■□□□ 1.4
AL049870.1-201ENST00000557196 CCDC180Q9P1Z9 1646 aa21.01■□□□□ 0.95
AL049870.1-201ENST00000557196 ABCC9O60706 1549 aa20.27■□□□□ 0.83
AL049870.1-201ENST00000557196 ZCCHC6Q5VYS8 1495 aaKnown RBP19.95■□□□□ 0.78
AL049870.1-201ENST00000557196 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
AL049870.1-201ENST00000557196 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
AL049870.1-201ENST00000557196 NACADO15069 1562 aa19.61■□□□□ 0.73
AL049870.1-201ENST00000557196 RB1CC1Q8TDY2 1594 aa19.57■□□□□ 0.72
AL049870.1-201ENST00000557196 MYO15BQ96JP2 1530 aa19.57■□□□□ 0.72
AL049870.1-201ENST00000557196 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
AL049870.1-201ENST00000557196 UNC13AQ9UPW8 1703 aa19.25■□□□□ 0.67
AL049870.1-201ENST00000557196 SHROOM4Q9ULL8 1493 aa19.13■□□□□ 0.65
AL049870.1-201ENST00000557196 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
AL049870.1-201ENST00000557196 PABPN1Q86U42 306 aaKnown RBP eCLIP18.97■□□□□ 0.63
AL049870.1-201ENST00000557196 CECR2Q9BXF3 1484 aa18.57■□□□□ 0.56
AL049870.1-201ENST00000557196 EIF4G1Q04637 1599 aaKnown RBP18.49■□□□□ 0.55
AL049870.1-201ENST00000557196 SMARCA4P51532 1647 aa18.44■□□□□ 0.54
AL049870.1-201ENST00000557196 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
AL049870.1-201ENST00000557196 MROH2BQ7Z745 1585 aa18.41■□□□□ 0.54
AL049870.1-201ENST00000557196 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
AL049870.1-201ENST00000557196 RSF1Q96T23 1441 aaPredicted RBP18.28■□□□□ 0.52
AL049870.1-201ENST00000557196 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
AL049870.1-201ENST00000557196 WIZO95785 1651 aa18.25■□□□□ 0.51
AL049870.1-201ENST00000557196 ATAD2BQ9ULI0 1458 aa18.2■□□□□ 0.5
AL049870.1-201ENST00000557196 PEG3Q9GZU2 1588 aa18.2■□□□□ 0.5
AL049870.1-201ENST00000557196 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
AL049870.1-201ENST00000557196 SUPT5HO00267 1087 aaKnown RBP18.09■□□□□ 0.49
AL049870.1-201ENST00000557196 HMGXB3Q12766 1538 aa18.08■□□□□ 0.49
AL049870.1-201ENST00000557196 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
AL049870.1-201ENST00000557196 BAZ1BQ9UIG0 1483 aaKnown RBP18.08■□□□□ 0.49
AL049870.1-201ENST00000557196 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
AL049870.1-201ENST00000557196 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
AL049870.1-201ENST00000557196 NESP48681 1621 aa17.67■□□□□ 0.42
AL049870.1-201ENST00000557196 LAMC3Q9Y6N6 1575 aa17.58■□□□□ 0.41
AL049870.1-201ENST00000557196 CFTRP13569 1480 aa17.58■□□□□ 0.41
AL049870.1-201ENST00000557196 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
AL049870.1-201ENST00000557196 PRDM2Q13029 1718 aa17.54■□□□□ 0.4
AL049870.1-201ENST00000557196 KIF21AQ7Z4S6 1674 aa17.48■□□□□ 0.39
AL049870.1-201ENST00000557196 FANCD2Q9BXW9 1451 aa17.44■□□□□ 0.38
AL049870.1-201ENST00000557196 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
AL049870.1-201ENST00000557196 ERCC6Q03468 1493 aa17.38■□□□□ 0.37
AL049870.1-201ENST00000557196 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
AL049870.1-201ENST00000557196 ABCC8Q09428 1581 aa17.36■□□□□ 0.37
AL049870.1-201ENST00000557196 THOC2Q8NI27 1593 aaKnown RBP17.33■□□□□ 0.37
AL049870.1-201ENST00000557196 URB2Q14146 1524 aaKnown RBP17.28■□□□□ 0.36
AL049870.1-201ENST00000557196 MRC2Q9UBG0 1479 aa17.28■□□□□ 0.36
AL049870.1-201ENST00000557196 CUX1P39880 1505 aa17.26■□□□□ 0.35
AL049870.1-201ENST00000557196 SYNJ1O43426 1573 aa17.24■□□□□ 0.35
AL049870.1-201ENST00000557196 WDR62O43379 1518 aa17.23■□□□□ 0.35
AL049870.1-201ENST00000557196 WRNQ14191 1432 aaPredicted RBP eCLIP17.22■□□□□ 0.35
AL049870.1-201ENST00000557196 DNMBPQ6XZF7 1577 aa17.22■□□□□ 0.35
AL049870.1-201ENST00000557196 TOPBP1Q92547 1522 aa17.21■□□□□ 0.35
AL049870.1-201ENST00000557196 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
AL049870.1-201ENST00000557196 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
AL049870.1-201ENST00000557196 FGD5Q6ZNL6 1462 aa17.12■□□□□ 0.33
AL049870.1-201ENST00000557196 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
AL049870.1-201ENST00000557196 CHIC1Q5VXU3 224 aa17.07■□□□□ 0.32
AL049870.1-201ENST00000557196 CUX2O14529 1486 aa17.06■□□□□ 0.32
AL049870.1-201ENST00000557196 RAD54L2Q9Y4B4 1467 aa17.05■□□□□ 0.32
AL049870.1-201ENST00000557196 TARBP1Q13395 1621 aaKnown RBP17.02■□□□□ 0.31
AL049870.1-201ENST00000557196 WDR97A6NE52 1622 aa17.01■□□□□ 0.31
AL049870.1-201ENST00000557196 TRIM41Q8WV44 630 aa16.99■□□□□ 0.31
AL049870.1-201ENST00000557196 SOGA1O94964 1423 aa16.97■□□□□ 0.31
AL049870.1-201ENST00000557196 IFT140Q96RY7 1462 aa16.97■□□□□ 0.31
AL049870.1-201ENST00000557196 ZNF608Q9ULD9 1512 aaPredicted RBP16.95■□□□□ 0.3
AL049870.1-201ENST00000557196 ABCA10Q8WWZ4 1543 aa16.93■□□□□ 0.3
AL049870.1-201ENST00000557196 EIF4G3O43432 1585 aaKnown RBP16.91■□□□□ 0.3
AL049870.1-201ENST00000557196 ABCA5Q8WWZ7 1642 aa16.89■□□□□ 0.29
AL049870.1-201ENST00000557196 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
AL049870.1-201ENST00000557196 RUSC2Q8N2Y8 1516 aa16.87■□□□□ 0.29
AL049870.1-201ENST00000557196 AQRO60306 1485 aaKnown RBP eCLIP16.86■□□□□ 0.29
AL049870.1-201ENST00000557196 PBRM1Q86U86 1689 aa16.83■□□□□ 0.28
AL049870.1-201ENST00000557196 GAPVD1Q14C86 1478 aa16.8■□□□□ 0.28
AL049870.1-201ENST00000557196 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
AL049870.1-201ENST00000557196 GRIN2BQ13224 1484 aa16.74■□□□□ 0.27
AL049870.1-201ENST00000557196 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
AL049870.1-201ENST00000557196 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
AL049870.1-201ENST00000557196 ADAMTS12P58397 1594 aa16.72■□□□□ 0.27
AL049870.1-201ENST00000557196 ERICH3Q5RHP9 1530 aa16.71■□□□□ 0.27
AL049870.1-201ENST00000557196 IGF1RP08069 1367 aa16.68■□□□□ 0.26
AL049870.1-201ENST00000557196 EEA1Q15075 1411 aa16.67■□□□□ 0.26
AL049870.1-201ENST00000557196 CUL7Q14999 1698 aa16.66■□□□□ 0.26
AL049870.1-201ENST00000557196 MAGI1Q96QZ7 1491 aaPredicted RBP16.66■□□□□ 0.26
AL049870.1-201ENST00000557196 CHD1O14646 1710 aa16.64■□□□□ 0.25
AL049870.1-201ENST00000557196 FHAD1B1AJZ9 1412 aa16.61■□□□□ 0.25
AL049870.1-201ENST00000557196 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
AL049870.1-201ENST00000557196 SYNJ2O15056 1496 aa16.6■□□□□ 0.25
AL049870.1-201ENST00000557196 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
AL049870.1-201ENST00000557196 CARMIL1Q5VZK9 1371 aa16.59■□□□□ 0.25
AL049870.1-201ENST00000557196 KIF21BO75037 1637 aa16.58■□□□□ 0.24
AL049870.1-201ENST00000557196 RAPGEF2Q9Y4G8 1499 aa16.57■□□□□ 0.24
AL049870.1-201ENST00000557196 GRIN2AQ12879 1464 aa16.56■□□□□ 0.24
AL049870.1-201ENST00000557196 EHMT2Q96KQ7 1210 aa16.56■□□□□ 0.24
AL049870.1-201ENST00000557196 FBLN2P98095 1184 aa16.54■□□□□ 0.24
AL049870.1-201ENST00000557196 CEP170Q5SW79 1584 aa16.52■□□□□ 0.24
AL049870.1-201ENST00000557196 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
AL049870.1-201ENST00000557196 GOLGA3Q08378 1498 aa16.48■□□□□ 0.23
AL049870.1-201ENST00000557196 NUP160Q12769 1436 aa16.45■□□□□ 0.22
AL049870.1-201ENST00000557196 CTTNBP2Q8WZ74 1663 aa16.45■□□□□ 0.22
AL049870.1-201ENST00000557196 CLASP1Q7Z460 1538 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms