RNA–Protein interactions for RNA: ENST00000557139.1

FOS-210, Transcript of Fos proto-oncogene, AP-1 transcription factor subunit, humanhuman

TSL 5

Gene FOS, Length 249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOS-210ENST00000557139 NISCHQ9Y2I1 1504 aa32.59■■■□□ 2.81
FOS-210ENST00000557139 CCDC180Q9P1Z9 1646 aa29.15■■■□□ 2.26
FOS-210ENST00000557139 ABCC9O60706 1549 aa28.59■■■□□ 2.17
FOS-210ENST00000557139 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
FOS-210ENST00000557139 NACADO15069 1562 aa27.43■■□□□ 1.98
FOS-210ENST00000557139 MYO15BQ96JP2 1530 aa27.23■■□□□ 1.95
FOS-210ENST00000557139 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
FOS-210ENST00000557139 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
FOS-210ENST00000557139 DCAF1Q9Y4B6 1507 aa27.02■■□□□ 1.92
FOS-210ENST00000557139 UNC13AQ9UPW8 1703 aa26.84■■□□□ 1.89
FOS-210ENST00000557139 PABPN1Q86U42 306 aaKnown RBP eCLIP26.62■■□□□ 1.85
FOS-210ENST00000557139 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
FOS-210ENST00000557139 SCRIBQ14160 1630 aa26.49■■□□□ 1.83
FOS-210ENST00000557139 SHROOM4Q9ULL8 1493 aa26.47■■□□□ 1.83
FOS-210ENST00000557139 DNAJC5BQ9UF47 199 aa26.34■■□□□ 1.81
FOS-210ENST00000557139 EIF4G1Q04637 1599 aaKnown RBP25.97■■□□□ 1.75
FOS-210ENST00000557139 CC2D2AQ9P2K1 1620 aa25.89■■□□□ 1.74
FOS-210ENST00000557139 CECR2Q9BXF3 1484 aa25.75■■□□□ 1.71
FOS-210ENST00000557139 SMARCA4P51532 1647 aa25.35■■□□□ 1.65
FOS-210ENST00000557139 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
FOS-210ENST00000557139 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
FOS-210ENST00000557139 SMARCA2P51531 1590 aa25.26■■□□□ 1.63
FOS-210ENST00000557139 ATAD2BQ9ULI0 1458 aa25.23■■□□□ 1.63
FOS-210ENST00000557139 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
FOS-210ENST00000557139 PEG3Q9GZU2 1588 aa25.14■■□□□ 1.61
FOS-210ENST00000557139 MROH2BQ7Z745 1585 aa25.06■■□□□ 1.6
FOS-210ENST00000557139 BAZ1BQ9UIG0 1483 aaKnown RBP25.05■■□□□ 1.6
FOS-210ENST00000557139 WIZO95785 1651 aa24.79■■□□□ 1.56
FOS-210ENST00000557139 ERCC6Q03468 1493 aa24.72■■□□□ 1.55
FOS-210ENST00000557139 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
FOS-210ENST00000557139 LAMC3Q9Y6N6 1575 aa24.68■■□□□ 1.54
FOS-210ENST00000557139 NESP48681 1621 aa24.66■■□□□ 1.54
FOS-210ENST00000557139 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
FOS-210ENST00000557139 CUX2O14529 1486 aa24.57■■□□□ 1.52
FOS-210ENST00000557139 CADPSQ9ULU8 1353 aa24.51■■□□□ 1.51
FOS-210ENST00000557139 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
FOS-210ENST00000557139 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
FOS-210ENST00000557139 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
FOS-210ENST00000557139 CFTRP13569 1480 aa24.34■■□□□ 1.49
FOS-210ENST00000557139 MRC2Q9UBG0 1479 aa24.26■■□□□ 1.47
FOS-210ENST00000557139 CEP164Q9UPV0 1460 aa24.25■■□□□ 1.47
FOS-210ENST00000557139 FANCD2Q9BXW9 1451 aa24.24■■□□□ 1.47
FOS-210ENST00000557139 CCDC88BA6NC98 1476 aa24.23■■□□□ 1.47
FOS-210ENST00000557139 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
FOS-210ENST00000557139 WDR62O43379 1518 aa24.2■■□□□ 1.46
FOS-210ENST00000557139 URB2Q14146 1524 aaKnown RBP23.99■■□□□ 1.43
FOS-210ENST00000557139 DNAJC5Q9H3Z4 198 aa23.98■■□□□ 1.43
FOS-210ENST00000557139 ABCC8Q09428 1581 aa23.87■■□□□ 1.41
FOS-210ENST00000557139 SUPT5HO00267 1087 aaKnown RBP23.85■■□□□ 1.41
FOS-210ENST00000557139 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
FOS-210ENST00000557139 DNMBPQ6XZF7 1577 aa23.81■■□□□ 1.4
FOS-210ENST00000557139 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
FOS-210ENST00000557139 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
FOS-210ENST00000557139 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
FOS-210ENST00000557139 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
FOS-210ENST00000557139 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
FOS-210ENST00000557139 CUX1P39880 1505 aa23.54■■□□□ 1.36
FOS-210ENST00000557139 FGD5Q6ZNL6 1462 aa23.51■■□□□ 1.35
FOS-210ENST00000557139 WDR97A6NE52 1622 aa23.49■■□□□ 1.35
FOS-210ENST00000557139 SOGA1O94964 1423 aa23.49■■□□□ 1.35
FOS-210ENST00000557139 RAD54L2Q9Y4B4 1467 aa23.45■■□□□ 1.34
FOS-210ENST00000557139 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
FOS-210ENST00000557139 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.341e-6■■■■□ 26.1
FOS-210ENST00000557139 TDRD9Q8NDG6 1382 aaKnown RBP23.35■■□□□ 1.33
FOS-210ENST00000557139 BIVM-ERCC5R4GMW8 1640 aa23.34■■□□□ 1.33
FOS-210ENST00000557139 WRNQ14191 1432 aaPredicted RBP eCLIP23.33■■□□□ 1.33
FOS-210ENST00000557139 TOP2BQ02880 1626 aa23.33■■□□□ 1.33
FOS-210ENST00000557139 ABCA10Q8WWZ4 1543 aa23.3■■□□□ 1.32
FOS-210ENST00000557139 CHD1O14646 1710 aa23.29■■□□□ 1.32
FOS-210ENST00000557139 GRIN2BQ13224 1484 aa23.28■■□□□ 1.32
FOS-210ENST00000557139 SYNJ1O43426 1573 aa23.27■■□□□ 1.32
FOS-210ENST00000557139 MAGI1Q96QZ7 1491 aaPredicted RBP23.26■■□□□ 1.31
FOS-210ENST00000557139 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
FOS-210ENST00000557139 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
FOS-210ENST00000557139 ABCA5Q8WWZ7 1642 aa23.23■■□□□ 1.31
FOS-210ENST00000557139 PBRM1Q86U86 1689 aa23.23■■□□□ 1.31
FOS-210ENST00000557139 FBLN2P98095 1184 aa23.18■■□□□ 1.3
FOS-210ENST00000557139 SYNJ2O15056 1496 aa23.16■■□□□ 1.3
FOS-210ENST00000557139 CHMP7Q8WUX9 453 aaPredicted RBP23.12■■□□□ 1.29
FOS-210ENST00000557139 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
FOS-210ENST00000557139 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
FOS-210ENST00000557139 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
FOS-210ENST00000557139 ARHGEF11O15085 1522 aa23.09■■□□□ 1.29
FOS-210ENST00000557139 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
FOS-210ENST00000557139 ERICH3Q5RHP9 1530 aa23.04■■□□□ 1.28
FOS-210ENST00000557139 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
FOS-210ENST00000557139 ADAMTS12P58397 1594 aa23.03■■□□□ 1.28
FOS-210ENST00000557139 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
FOS-210ENST00000557139 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
FOS-210ENST00000557139 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
FOS-210ENST00000557139 NUP160Q12769 1436 aa22.88■■□□□ 1.25
FOS-210ENST00000557139 ARAP1Q96P48 1450 aa22.86■■□□□ 1.25
FOS-210ENST00000557139 CEP170Q5SW79 1584 aa22.84■■□□□ 1.25
FOS-210ENST00000557139 CYB5RLQ6IPT4 315 aa22.82■■□□□ 1.24
FOS-210ENST00000557139 CUL7Q14999 1698 aa22.81■■□□□ 1.24
FOS-210ENST00000557139 IGF1RP08069 1367 aa22.76■■□□□ 1.23
FOS-210ENST00000557139 SHROOM2Q13796 1616 aa22.75■■□□□ 1.23
FOS-210ENST00000557139 RUSC2Q8N2Y8 1516 aa22.7■■□□□ 1.22
FOS-210ENST00000557139 CARMIL1Q5VZK9 1371 aa22.63■■□□□ 1.21
FOS-210ENST00000557139 ERCC6L2Q5T890 1561 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms