RNA–Protein interactions for RNA: ENST00000557117.1

DEGS2-203, Transcript of delta 4-desaturase, sphingolipid 2, humanhuman

TSL 2

Gene DEGS2, Length 840 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEGS2-203ENST00000557117 NISCHQ9Y2I1 1504 aa53.54■■■■■ 6.16
DEGS2-203ENST00000557117 CCDC180Q9P1Z9 1646 aa47.59■■■■■ 5.21
DEGS2-203ENST00000557117 ABCC9O60706 1549 aa46.51■■■■■ 5.04
DEGS2-203ENST00000557117 RB1CC1Q8TDY2 1594 aa44.82■■■■■ 4.77
DEGS2-203ENST00000557117 NACADO15069 1562 aa44.81■■■■■ 4.76
DEGS2-203ENST00000557117 DCAF8L2P0C7V8 631 aa44.63■■■■■ 4.74
DEGS2-203ENST00000557117 MYO15BQ96JP2 1530 aa44.63■■■■■ 4.73
DEGS2-203ENST00000557117 ZCCHC6Q5VYS8 1495 aaKnown RBP44.6■■■■■ 4.73
DEGS2-203ENST00000557117 DCAF1Q9Y4B6 1507 aa44.4■■■■■ 4.7
DEGS2-203ENST00000557117 UNC13AQ9UPW8 1703 aa43.64■■■■■ 4.58
DEGS2-203ENST00000557117 PABPN1Q86U42 306 aaKnown RBP eCLIP43.46■■■■■ 4.55
DEGS2-203ENST00000557117 BICRAQ9NZM4 1560 aa43.41■■■■■ 4.54
DEGS2-203ENST00000557117 SCRIBQ14160 1630 aa43.33■■■■■ 4.53
DEGS2-203ENST00000557117 SHROOM4Q9ULL8 1493 aa43.14■■■■■ 4.5
DEGS2-203ENST00000557117 DNAJC5BQ9UF47 199 aa42.71■■■■■ 4.43
DEGS2-203ENST00000557117 EIF4G1Q04637 1599 aaKnown RBP42.29■■■■■ 4.36
DEGS2-203ENST00000557117 CC2D2AQ9P2K1 1620 aa42.09■■■■■ 4.33
DEGS2-203ENST00000557117 CECR2Q9BXF3 1484 aa41.85■■■■■ 4.29
DEGS2-203ENST00000557117 BAZ1AQ9NRL2 1556 aaPredicted RBP41.51■■■■■ 4.24
DEGS2-203ENST00000557117 SMARCA4P51532 1647 aa41.51■■■■■ 4.23
DEGS2-203ENST00000557117 NCAPD3P42695 1498 aa41.36■■■■■ 4.21
DEGS2-203ENST00000557117 ATAD2BQ9ULI0 1458 aa41.34■■■■■ 4.21
DEGS2-203ENST00000557117 SMARCA2P51531 1590 aa41.3■■■■■ 4.2
DEGS2-203ENST00000557117 MROH2BQ7Z745 1585 aa41.21■■■■■ 4.19
DEGS2-203ENST00000557117 PEG3Q9GZU2 1588 aa41.19■■■■■ 4.18
DEGS2-203ENST00000557117 HMGXB3Q12766 1538 aa41.13■■■■■ 4.18
DEGS2-203ENST00000557117 BAZ1BQ9UIG0 1483 aaKnown RBP40.97■■■■■ 4.15
DEGS2-203ENST00000557117 RSF1Q96T23 1441 aaPredicted RBP40.78■■■■■ 4.12
DEGS2-203ENST00000557117 WIZO95785 1651 aa40.71■■■■■ 4.11
DEGS2-203ENST00000557117 TOP2AP11388 1531 aaKnown RBP40.37■■■■■ 4.05
DEGS2-203ENST00000557117 LAMC3Q9Y6N6 1575 aa40.24■■■■■ 4.03
DEGS2-203ENST00000557117 NESP48681 1621 aa40.23■■■■■ 4.03
DEGS2-203ENST00000557117 CADPSQ9ULU8 1353 aa40.14■■■■■ 4.02
DEGS2-203ENST00000557117 ERCC6Q03468 1493 aa40.13■■■■■ 4.02
DEGS2-203ENST00000557117 PDS5BQ9NTI5 1447 aa40■■■■□ 3.99
DEGS2-203ENST00000557117 CFTRP13569 1480 aa39.9■■■■□ 3.98
DEGS2-203ENST00000557117 CCDC88BA6NC98 1476 aa39.88■■■■□ 3.98
DEGS2-203ENST00000557117 CUX2O14529 1486 aa39.81■■■■□ 3.96
DEGS2-203ENST00000557117 KIF21AQ7Z4S6 1674 aa39.71■■■■□ 3.95
DEGS2-203ENST00000557117 THOC2Q8NI27 1593 aaKnown RBP39.66■■■■□ 3.94
DEGS2-203ENST00000557117 SUPT5HO00267 1087 aaKnown RBP39.64■■■■□ 3.94
DEGS2-203ENST00000557117 FANCD2Q9BXW9 1451 aa39.63■■■■□ 3.94
DEGS2-203ENST00000557117 CEP164Q9UPV0 1460 aa39.59■■■■□ 3.93
DEGS2-203ENST00000557117 MRC2Q9UBG0 1479 aa39.55■■■■□ 3.92
DEGS2-203ENST00000557117 PRDM2Q13029 1718 aa39.46■■■■□ 3.91
DEGS2-203ENST00000557117 WDR62O43379 1518 aa39.41■■■■□ 3.9
DEGS2-203ENST00000557117 URB2Q14146 1524 aaKnown RBP39.21■■■■□ 3.87
DEGS2-203ENST00000557117 ABCC8Q09428 1581 aa39.08■■■■□ 3.85
DEGS2-203ENST00000557117 TOPBP1Q92547 1522 aa38.99■■■■□ 3.83
DEGS2-203ENST00000557117 DNMBPQ6XZF7 1577 aa38.95■■■■□ 3.83
DEGS2-203ENST00000557117 IFT140Q96RY7 1462 aa38.8■■■■□ 3.8
DEGS2-203ENST00000557117 CUX1P39880 1505 aa38.67■■■■□ 3.78
DEGS2-203ENST00000557117 POLA1P09884 1462 aaPredicted RBP38.66■■■■□ 3.78
DEGS2-203ENST00000557117 DNAJC5Q9H3Z4 198 aa38.57■■■■□ 3.76
DEGS2-203ENST00000557117 TARBP1Q13395 1621 aaKnown RBP38.55■■■■□ 3.76
DEGS2-203ENST00000557117 FGD5Q6ZNL6 1462 aa38.54■■■■□ 3.76
DEGS2-203ENST00000557117 ZNF608Q9ULD9 1512 aaPredicted RBP38.53■■■■□ 3.76
DEGS2-203ENST00000557117 SOGA1O94964 1423 aa38.52■■■■□ 3.76
DEGS2-203ENST00000557117 WRNQ14191 1432 aaPredicted RBP eCLIP38.46■■■■□ 3.75
DEGS2-203ENST00000557117 RAD54L2Q9Y4B4 1467 aa38.44■■■■□ 3.74
DEGS2-203ENST00000557117 EIF4G3O43432 1585 aaKnown RBP38.37■■■■□ 3.73
DEGS2-203ENST00000557117 TOP2BQ02880 1626 aa38.36■■■■□ 3.73
DEGS2-203ENST00000557117 WDR97A6NE52 1622 aa38.35■■■■□ 3.73
DEGS2-203ENST00000557117 BIVM-ERCC5R4GMW8 1640 aa38.34■■■■□ 3.73
DEGS2-203ENST00000557117 AQRO60306 1485 aaKnown RBP eCLIP38.33■■■■□ 3.73
DEGS2-203ENST00000557117 SYNJ1O43426 1573 aa38.28■■■■□ 3.72
DEGS2-203ENST00000557117 TDRD9Q8NDG6 1382 aaKnown RBP38.26■■■■□ 3.72
DEGS2-203ENST00000557117 ABCA10Q8WWZ4 1543 aa38.23■■■■□ 3.71
DEGS2-203ENST00000557117 OSCARQ8IYS5 282 aa38.14■■■■□ 3.7
DEGS2-203ENST00000557117 GRIN2BQ13224 1484 aa38.09■■■■□ 3.69
DEGS2-203ENST00000557117 GAPVD1Q14C86 1478 aa38.07■■■■□ 3.68
DEGS2-203ENST00000557117 ABCA5Q8WWZ7 1642 aa38.02■■■■□ 3.68
DEGS2-203ENST00000557117 MAGI1Q96QZ7 1491 aaPredicted RBP38.01■■■■□ 3.67
DEGS2-203ENST00000557117 SNAPC4Q5SXM2 1469 aa37.98■■■■□ 3.67
DEGS2-203ENST00000557117 PBRM1Q86U86 1689 aa37.88■■■■□ 3.66
DEGS2-203ENST00000557117 FBLN2P98095 1184 aa37.85■■■■□ 3.65
DEGS2-203ENST00000557117 SYNJ2O15056 1496 aa37.84■■■■□ 3.65
DEGS2-203ENST00000557117 CHD1O14646 1710 aa37.83■■■■□ 3.65
DEGS2-203ENST00000557117 CHMP7Q8WUX9 453 aaPredicted RBP37.82■■■■□ 3.64
DEGS2-203ENST00000557117 ERICH3Q5RHP9 1530 aa37.78■■■■□ 3.64
DEGS2-203ENST00000557117 KIF27Q86VH2 1401 aa37.68■■■■□ 3.62
DEGS2-203ENST00000557117 FHAD1B1AJZ9 1412 aa37.67■■■■□ 3.62
DEGS2-203ENST00000557117 ADAMTS12P58397 1594 aa37.65■■■■□ 3.62
DEGS2-203ENST00000557117 GRIN2AQ12879 1464 aa37.58■■■■□ 3.61
DEGS2-203ENST00000557117 CLASP1Q7Z460 1538 aa37.54■■■■□ 3.6
DEGS2-203ENST00000557117 IGF1RP08069 1367 aa37.53■■■■□ 3.6
DEGS2-203ENST00000557117 TRIM41Q8WV44 630 aa37.51■■■■□ 3.6
DEGS2-203ENST00000557117 ARHGEF11O15085 1522 aa37.46■■■■□ 3.59
DEGS2-203ENST00000557117 NUP160Q12769 1436 aa37.44■■■■□ 3.58
DEGS2-203ENST00000557117 RIMBP3CA6NJZ7 1639 aa37.42■■■■□ 3.58
DEGS2-203ENST00000557117 RIMBP3BA6NNM3 1639 aa37.42■■■■□ 3.58
DEGS2-203ENST00000557117 RIMBP3Q9UFD9 1639 aa37.42■■■■□ 3.58
DEGS2-203ENST00000557117 CUL7Q14999 1698 aa37.39■■■■□ 3.58
DEGS2-203ENST00000557117 CEP170Q5SW79 1584 aa37.34■■■■□ 3.57
DEGS2-203ENST00000557117 CARMIL1Q5VZK9 1371 aa37.29■■■■□ 3.56
DEGS2-203ENST00000557117 RUSC2Q8N2Y8 1516 aa37.21■■■■□ 3.55
DEGS2-203ENST00000557117 ARAP1Q96P48 1450 aa37.15■■■■□ 3.54
DEGS2-203ENST00000557117 SHROOM2Q13796 1616 aa37.12■■■■□ 3.53
DEGS2-203ENST00000557117 CYB5RLQ6IPT4 315 aa37.09■■■■□ 3.53
DEGS2-203ENST00000557117 KIAA0586Q9BVV6 1533 aa37.09■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms