RNA–Protein interactions for RNA: ENST00000557058.1

ITGA7-217, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 1,040 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-217ENST00000557058 NISCHQ9Y2I1 1504 aa35.16■■■■□ 3.22
ITGA7-217ENST00000557058 ABCC9O60706 1549 aa32.17■■■□□ 2.74
ITGA7-217ENST00000557058 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
ITGA7-217ENST00000557058 DNAJC5BQ9UF47 199 aa31.25■■■□□ 2.59
ITGA7-217ENST00000557058 RB1CC1Q8TDY2 1594 aa30.14■■■□□ 2.42
ITGA7-217ENST00000557058 NACADO15069 1562 aa29.94■■■□□ 2.38
ITGA7-217ENST00000557058 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
ITGA7-217ENST00000557058 DCAF8L2P0C7V8 631 aa29.58■■■□□ 2.33
ITGA7-217ENST00000557058 MYO15BQ96JP2 1530 aa29.58■■■□□ 2.33
ITGA7-217ENST00000557058 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
ITGA7-217ENST00000557058 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
ITGA7-217ENST00000557058 BICRAQ9NZM4 1560 aa29.26■■■□□ 2.28
ITGA7-217ENST00000557058 DCAF1Q9Y4B6 1507 aa29.12■■■□□ 2.25
ITGA7-217ENST00000557058 ZCCHC6Q5VYS8 1495 aaKnown RBP29.11■■■□□ 2.25
ITGA7-217ENST00000557058 CECR2Q9BXF3 1484 aa29.04■■■□□ 2.24
ITGA7-217ENST00000557058 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
ITGA7-217ENST00000557058 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
ITGA7-217ENST00000557058 SCRIBQ14160 1630 aa28.68■■■□□ 2.18
ITGA7-217ENST00000557058 EIF4G1Q04637 1599 aaKnown RBP28.59■■■□□ 2.17
ITGA7-217ENST00000557058 CUX2O14529 1486 aa28.03■■■□□ 2.08
ITGA7-217ENST00000557058 ERCC6Q03468 1493 aa27.79■■■□□ 2.04
ITGA7-217ENST00000557058 TRIM41Q8WV44 630 aa27.75■■■□□ 2.03
ITGA7-217ENST00000557058 NCAPD3P42695 1498 aa27.66■■■□□ 2.02
ITGA7-217ENST00000557058 ATAD2BQ9ULI0 1458 aa27.51■■□□□ 1.99
ITGA7-217ENST00000557058 SMARCA2P51531 1590 aa27.44■■□□□ 1.98
ITGA7-217ENST00000557058 SMARCA4P51532 1647 aa27.42■■□□□ 1.98
ITGA7-217ENST00000557058 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
ITGA7-217ENST00000557058 NESP48681 1621 aa27.35■■□□□ 1.97
ITGA7-217ENST00000557058 BAZ1AQ9NRL2 1556 aaPredicted RBP27.31■■□□□ 1.96
ITGA7-217ENST00000557058 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
ITGA7-217ENST00000557058 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
ITGA7-217ENST00000557058 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.94
ITGA7-217ENST00000557058 MROH2BQ7Z745 1585 aa27.04■■□□□ 1.92
ITGA7-217ENST00000557058 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
ITGA7-217ENST00000557058 KIF21AQ7Z4S6 1674 aa26.93■■□□□ 1.9
ITGA7-217ENST00000557058 PDS5BQ9NTI5 1447 aa26.87■■□□□ 1.89
ITGA7-217ENST00000557058 CADPSQ9ULU8 1353 aa26.78■■□□□ 1.88
ITGA7-217ENST00000557058 WIZO95785 1651 aa26.68■■□□□ 1.86
ITGA7-217ENST00000557058 OSCARQ8IYS5 282 aa26.63■■□□□ 1.85
ITGA7-217ENST00000557058 SUPT5HO00267 1087 aaKnown RBP26.62■■□□□ 1.85
ITGA7-217ENST00000557058 MRC2Q9UBG0 1479 aa26.62■■□□□ 1.85
ITGA7-217ENST00000557058 WDR62O43379 1518 aa26.57■■□□□ 1.84
ITGA7-217ENST00000557058 RSF1Q96T23 1441 aaPredicted RBP26.49■■□□□ 1.83
ITGA7-217ENST00000557058 CEP164Q9UPV0 1460 aa26.48■■□□□ 1.83
ITGA7-217ENST00000557058 RIMBP3CA6NJZ7 1639 aa26.47■■□□□ 1.83
ITGA7-217ENST00000557058 RIMBP3BA6NNM3 1639 aa26.47■■□□□ 1.83
ITGA7-217ENST00000557058 RIMBP3Q9UFD9 1639 aa26.47■■□□□ 1.83
ITGA7-217ENST00000557058 CFTRP13569 1480 aa26.46■■□□□ 1.83
ITGA7-217ENST00000557058 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
ITGA7-217ENST00000557058 TOP2AP11388 1531 aaKnown RBP26.4■■□□□ 1.82
ITGA7-217ENST00000557058 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
ITGA7-217ENST00000557058 TRHP20396 242 aaPredicted RBP26.26■■□□□ 1.79
ITGA7-217ENST00000557058 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
ITGA7-217ENST00000557058 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
ITGA7-217ENST00000557058 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
ITGA7-217ENST00000557058 PRDM2Q13029 1718 aa26.14■■□□□ 1.77
ITGA7-217ENST00000557058 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
ITGA7-217ENST00000557058 IFT140Q96RY7 1462 aa25.99■■□□□ 1.75
ITGA7-217ENST00000557058 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
ITGA7-217ENST00000557058 ZNF608Q9ULD9 1512 aaPredicted RBP25.93■■□□□ 1.74
ITGA7-217ENST00000557058 TOPBP1Q92547 1522 aa25.93■■□□□ 1.74
ITGA7-217ENST00000557058 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
ITGA7-217ENST00000557058 DNMBPQ6XZF7 1577 aa25.83■■□□□ 1.73
ITGA7-217ENST00000557058 EIF4G3O43432 1585 aaKnown RBP25.74■■□□□ 1.71
ITGA7-217ENST00000557058 CHD1O14646 1710 aa25.74■■□□□ 1.71
ITGA7-217ENST00000557058 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.71
ITGA7-217ENST00000557058 POLA1P09884 1462 aaPredicted RBP25.66■■□□□ 1.7
ITGA7-217ENST00000557058 FBLN2P98095 1184 aa25.64■■□□□ 1.7
ITGA7-217ENST00000557058 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.69
ITGA7-217ENST00000557058 CHIC1Q5VXU3 224 aa25.62■■□□□ 1.69
ITGA7-217ENST00000557058 SOGA1O94964 1423 aa25.54■■□□□ 1.68
ITGA7-217ENST00000557058 WDR97A6NE52 1622 aa25.53■■□□□ 1.68
ITGA7-217ENST00000557058 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
ITGA7-217ENST00000557058 TDRD9Q8NDG6 1382 aaKnown RBP25.46■■□□□ 1.67
ITGA7-217ENST00000557058 FGD5Q6ZNL6 1462 aa25.46■■□□□ 1.67
ITGA7-217ENST00000557058 CUX1P39880 1505 aa25.41■■□□□ 1.66
ITGA7-217ENST00000557058 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
ITGA7-217ENST00000557058 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
ITGA7-217ENST00000557058 ILDR1Q86SU0 546 aaPredicted RBP25.36■■□□□ 1.65
ITGA7-217ENST00000557058 CLASP1Q7Z460 1538 aa25.35■■□□□ 1.65
ITGA7-217ENST00000557058 GRIN2BQ13224 1484 aa25.34■■□□□ 1.65
ITGA7-217ENST00000557058 CHMP7Q8WUX9 453 aaPredicted RBP25.32■■□□□ 1.64
ITGA7-217ENST00000557058 SYNJ1O43426 1573 aa25.3■■□□□ 1.64
ITGA7-217ENST00000557058 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
ITGA7-217ENST00000557058 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
ITGA7-217ENST00000557058 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
ITGA7-217ENST00000557058 PBRM1Q86U86 1689 aa25.17■■□□□ 1.62
ITGA7-217ENST00000557058 ABCA5Q8WWZ7 1642 aa25.15■■□□□ 1.62
ITGA7-217ENST00000557058 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.61
ITGA7-217ENST00000557058 GRIN2AQ12879 1464 aa25.01■■□□□ 1.59
ITGA7-217ENST00000557058 TOP2BQ02880 1626 aa25.01■■□□□ 1.59
ITGA7-217ENST00000557058 BIVM-ERCC5R4GMW8 1640 aa25.01■■□□□ 1.59
ITGA7-217ENST00000557058 ERCC6L2Q5T890 1561 aa25■■□□□ 1.59
ITGA7-217ENST00000557058 KIF13AQ9H1H9 1805 aa24.97■■□□□ 1.59
ITGA7-217ENST00000557058 NUP160Q12769 1436 aa24.96■■□□□ 1.59
ITGA7-217ENST00000557058 KDM4FA0A1W2PPD8 638 aa24.96■■□□□ 1.59
ITGA7-217ENST00000557058 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
ITGA7-217ENST00000557058 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
ITGA7-217ENST00000557058 ERICH3Q5RHP9 1530 aa24.9■■□□□ 1.58
ITGA7-217ENST00000557058 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms