RNA–Protein interactions for RNA: ENST00000557057.5

ALKBH1-204, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

TSL 3

Gene ALKBH1, Length 1,750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-204ENST00000557057 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
ALKBH1-204ENST00000557057 CCDC180Q9P1Z9 1646 aa35.19■■■■□ 3.22
ALKBH1-204ENST00000557057 ZCCHC6Q5VYS8 1495 aaKnown RBP34.02■■■■□ 3.04
ALKBH1-204ENST00000557057 DCAF1Q9Y4B6 1507 aa33.46■■■□□ 2.95
ALKBH1-204ENST00000557057 DCAF8L2P0C7V8 631 aa33.34■■■□□ 2.93
ALKBH1-204ENST00000557057 ABCC9O60706 1549 aa33.18■■■□□ 2.9
ALKBH1-204ENST00000557057 SHROOM4Q9ULL8 1493 aa33.07■■■□□ 2.88
ALKBH1-204ENST00000557057 MYO15BQ96JP2 1530 aa33.02■■■□□ 2.88
ALKBH1-204ENST00000557057 NACADO15069 1562 aa32.77■■■□□ 2.84
ALKBH1-204ENST00000557057 RB1CC1Q8TDY2 1594 aa32.44■■■□□ 2.78
ALKBH1-204ENST00000557057 SCRIBQ14160 1630 aa32.38■■■□□ 2.77
ALKBH1-204ENST00000557057 SUPT5HO00267 1087 aaKnown RBP31.88■■■□□ 2.69
ALKBH1-204ENST00000557057 UNC13AQ9UPW8 1703 aa31.77■■■□□ 2.68
ALKBH1-204ENST00000557057 BICRAQ9NZM4 1560 aa31.48■■■□□ 2.63
ALKBH1-204ENST00000557057 RSF1Q96T23 1441 aaPredicted RBP31.44■■■□□ 2.62
ALKBH1-204ENST00000557057 CECR2Q9BXF3 1484 aa31.43■■■□□ 2.62
ALKBH1-204ENST00000557057 PABPN1Q86U42 306 aaKnown RBP eCLIP31.33■■■□□ 2.61
ALKBH1-204ENST00000557057 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
ALKBH1-204ENST00000557057 BAZ1AQ9NRL2 1556 aaPredicted RBP31.22■■■□□ 2.59
ALKBH1-204ENST00000557057 SMARCA4P51532 1647 aa31.06■■■□□ 2.56
ALKBH1-204ENST00000557057 WIZO95785 1651 aa30.99■■■□□ 2.55
ALKBH1-204ENST00000557057 PEG3Q9GZU2 1588 aa30.69■■■□□ 2.5
ALKBH1-204ENST00000557057 TOP2AP11388 1531 aaKnown RBP30.69■■■□□ 2.5
ALKBH1-204ENST00000557057 CHIC1Q5VXU3 224 aa30.6■■■□□ 2.49
ALKBH1-204ENST00000557057 ATAD2BQ9ULI0 1458 aa30.54■■■□□ 2.48
ALKBH1-204ENST00000557057 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
ALKBH1-204ENST00000557057 SMARCA2P51531 1590 aa30.51■■■□□ 2.47
ALKBH1-204ENST00000557057 CCDC88BA6NC98 1476 aa30.39■■■□□ 2.46
ALKBH1-204ENST00000557057 BAZ1BQ9UIG0 1483 aaKnown RBP30.36■■■□□ 2.45
ALKBH1-204ENST00000557057 NCAPD3P42695 1498 aa30.26■■■□□ 2.43
ALKBH1-204ENST00000557057 HMGXB3Q12766 1538 aa30.21■■■□□ 2.43
ALKBH1-204ENST00000557057 CC2D2AQ9P2K1 1620 aa30.03■■■□□ 2.4
ALKBH1-204ENST00000557057 TRIM41Q8WV44 630 aa29.98■■■□□ 2.39
ALKBH1-204ENST00000557057 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
ALKBH1-204ENST00000557057 CFTRP13569 1480 aa29.62■■■□□ 2.33
ALKBH1-204ENST00000557057 WRNQ14191 1432 aaPredicted RBP eCLIP29.58■■■□□ 2.33
ALKBH1-204ENST00000557057 CADPSQ9ULU8 1353 aa29.49■■■□□ 2.31
ALKBH1-204ENST00000557057 SYNJ1O43426 1573 aa29.45■■■□□ 2.3
ALKBH1-204ENST00000557057 LOC105371045A0A1W2PR82 267 aa29.43■■■□□ 2.3
ALKBH1-204ENST00000557057 FAM9AQ8IZU1 332 aaPredicted RBP29.41■■■□□ 2.3
ALKBH1-204ENST00000557057 PRDM2Q13029 1718 aa29.41■■■□□ 2.3
ALKBH1-204ENST00000557057 TOP2BQ02880 1626 aa29.32■■■□□ 2.28
ALKBH1-204ENST00000557057 BIVM-ERCC5R4GMW8 1640 aa29.27■■■□□ 2.28
ALKBH1-204ENST00000557057 DNAJC5BQ9UF47 199 aa29.26■■■□□ 2.28
ALKBH1-204ENST00000557057 SOGA1O94964 1423 aa29.26■■■□□ 2.27
ALKBH1-204ENST00000557057 EEA1Q15075 1411 aa29.23■■■□□ 2.27
ALKBH1-204ENST00000557057 CUX1P39880 1505 aa29.22■■■□□ 2.27
ALKBH1-204ENST00000557057 LAMC3Q9Y6N6 1575 aa29.18■■■□□ 2.26
ALKBH1-204ENST00000557057 NESP48681 1621 aa29.18■■■□□ 2.26
ALKBH1-204ENST00000557057 FANCD2Q9BXW9 1451 aa29.16■■■□□ 2.26
ALKBH1-204ENST00000557057 RUSC2Q8N2Y8 1516 aa29.13■■■□□ 2.25
ALKBH1-204ENST00000557057 CSRNP3Q8WYN3 585 aa29.06■■■□□ 2.24
ALKBH1-204ENST00000557057 EHMT2Q96KQ7 1210 aa28.98■■■□□ 2.23
ALKBH1-204ENST00000557057 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
ALKBH1-204ENST00000557057 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.23
ALKBH1-204ENST00000557057 DNMBPQ6XZF7 1577 aa28.91■■■□□ 2.22
ALKBH1-204ENST00000557057 FGD5Q6ZNL6 1462 aa28.88■■■□□ 2.21
ALKBH1-204ENST00000557057 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
ALKBH1-204ENST00000557057 GOLGA3Q08378 1498 aa28.83■■■□□ 2.21
ALKBH1-204ENST00000557057 KIF21BO75037 1637 aa28.83■■■□□ 2.21
ALKBH1-204ENST00000557057 KIF27Q86VH2 1401 aa28.83■■■□□ 2.2
ALKBH1-204ENST00000557057 KIF21AQ7Z4S6 1674 aa28.79■■■□□ 2.2
ALKBH1-204ENST00000557057 URB2Q14146 1524 aaKnown RBP28.78■■■□□ 2.2
ALKBH1-204ENST00000557057 TNIKQ9UKE5 1360 aa28.77■■■□□ 2.2
ALKBH1-204ENST00000557057 POLA1P09884 1462 aaPredicted RBP28.73■■■□□ 2.19
ALKBH1-204ENST00000557057 CUX2O14529 1486 aa28.72■■■□□ 2.19
ALKBH1-204ENST00000557057 UBTFP17480 764 aaKnown RBP28.67■■■□□ 2.18
ALKBH1-204ENST00000557057 PRXQ9BXM0 1461 aa28.67■■■□□ 2.18
ALKBH1-204ENST00000557057 RAPGEF2Q9Y4G8 1499 aa28.66■■■□□ 2.18
ALKBH1-204ENST00000557057 ABCA10Q8WWZ4 1543 aa28.64■■■□□ 2.18
ALKBH1-204ENST00000557057 RAD54L2Q9Y4B4 1467 aa28.64■■■□□ 2.17
ALKBH1-204ENST00000557057 ERICH3Q5RHP9 1530 aa28.62■■■□□ 2.17
ALKBH1-204ENST00000557057 CEP162Q5TB80 1403 aa28.61■■■□□ 2.17
ALKBH1-204ENST00000557057 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
ALKBH1-204ENST00000557057 IGF1RP08069 1367 aa28.57■■■□□ 2.16
ALKBH1-204ENST00000557057 WDR97A6NE52 1622 aa28.5■■■□□ 2.15
ALKBH1-204ENST00000557057 WDR62O43379 1518 aa28.44■■■□□ 2.14
ALKBH1-204ENST00000557057 ERCC6Q03468 1493 aa28.43■■■□□ 2.14
ALKBH1-204ENST00000557057 CARMIL1Q5VZK9 1371 aa28.42■■■□□ 2.14
ALKBH1-204ENST00000557057 TARBP1Q13395 1621 aaKnown RBP28.41■■■□□ 2.14
ALKBH1-204ENST00000557057 ABCA5Q8WWZ7 1642 aa28.38■■■□□ 2.13
ALKBH1-204ENST00000557057 CLIP1P30622 1438 aa28.37■■■□□ 2.13
ALKBH1-204ENST00000557057 TDRD9Q8NDG6 1382 aaKnown RBP28.34■■■□□ 2.13
ALKBH1-204ENST00000557057 GAPVD1Q14C86 1478 aa28.32■■■□□ 2.12
ALKBH1-204ENST00000557057 THOC2Q8NI27 1593 aaKnown RBP28.31■■■□□ 2.12
ALKBH1-204ENST00000557057 CUL7Q14999 1698 aa28.31■■■□□ 2.12
ALKBH1-204ENST00000557057 IFT140Q96RY7 1462 aa28.26■■■□□ 2.12
ALKBH1-204ENST00000557057 PCGF6Q9BYE7 350 aa28.19■■■□□ 2.1
ALKBH1-204ENST00000557057 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
ALKBH1-204ENST00000557057 RANGAP1P46060 587 aaPredicted RBP28.16■■■□□ 2.1
ALKBH1-204ENST00000557057 AQRO60306 1485 aaKnown RBP eCLIP28.15■■■□□ 2.1
ALKBH1-204ENST00000557057 VPS8Q8N3P4 1428 aa28.14■■■□□ 2.1
ALKBH1-204ENST00000557057 PBRM1Q86U86 1689 aa28.12■■■□□ 2.09
ALKBH1-204ENST00000557057 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
ALKBH1-204ENST00000557057 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
ALKBH1-204ENST00000557057 ARAP1Q96P48 1450 aa28.08■■■□□ 2.09
ALKBH1-204ENST00000557057 ARHGAP35Q9NRY4 1499 aa28.05■■■□□ 2.08
ALKBH1-204ENST00000557057 FHAD1B1AJZ9 1412 aa28.03■■■□□ 2.08
ALKBH1-204ENST00000557057 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.08
ALKBH1-204ENST00000557057 ADAMTS12P58397 1594 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms