RNA–Protein interactions for RNA: ENST00000557051.1

NID2-207, Transcript of nidogen 2, humanhuman

TSL 4

Gene NID2, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID2-207ENST00000557051 NISCHQ9Y2I1 1504 aa24.4■■□□□ 1.5
NID2-207ENST00000557051 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
NID2-207ENST00000557051 ABCC9O60706 1549 aa21.02■□□□□ 0.96
NID2-207ENST00000557051 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
NID2-207ENST00000557051 NACADO15069 1562 aa20.3■□□□□ 0.84
NID2-207ENST00000557051 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
NID2-207ENST00000557051 MYO15BQ96JP2 1530 aa20.25■□□□□ 0.83
NID2-207ENST00000557051 DCAF1Q9Y4B6 1507 aa20.22■□□□□ 0.83
NID2-207ENST00000557051 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
NID2-207ENST00000557051 DCAF8L2P0C7V8 631 aa20.06■□□□□ 0.8
NID2-207ENST00000557051 BICRAQ9NZM4 1560 aa19.8■□□□□ 0.76
NID2-207ENST00000557051 SCRIBQ14160 1630 aa19.79■□□□□ 0.76
NID2-207ENST00000557051 PABPN1Q86U42 306 aaKnown RBP eCLIP19.59■□□□□ 0.73
NID2-207ENST00000557051 SHROOM4Q9ULL8 1493 aa19.48■□□□□ 0.71
NID2-207ENST00000557051 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
NID2-207ENST00000557051 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
NID2-207ENST00000557051 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
NID2-207ENST00000557051 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
NID2-207ENST00000557051 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
NID2-207ENST00000557051 BAZ1AQ9NRL2 1556 aaPredicted RBP18.88■□□□□ 0.61
NID2-207ENST00000557051 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.6
NID2-207ENST00000557051 PEG3Q9GZU2 1588 aa18.79■□□□□ 0.6
NID2-207ENST00000557051 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
NID2-207ENST00000557051 SMARCA2P51531 1590 aa18.72■□□□□ 0.59
NID2-207ENST00000557051 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
NID2-207ENST00000557051 HMGXB3Q12766 1538 aa18.69■□□□□ 0.58
NID2-207ENST00000557051 WIZO95785 1651 aa18.68■□□□□ 0.58
NID2-207ENST00000557051 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
NID2-207ENST00000557051 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
NID2-207ENST00000557051 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
NID2-207ENST00000557051 NESP48681 1621 aa18.28■□□□□ 0.52
NID2-207ENST00000557051 LAMC3Q9Y6N6 1575 aa18.24■□□□□ 0.51
NID2-207ENST00000557051 CCDC88BA6NC98 1476 aa18.18■□□□□ 0.5
NID2-207ENST00000557051 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
NID2-207ENST00000557051 KIF21AQ7Z4S6 1674 aa18.17■□□□□ 0.5
NID2-207ENST00000557051 CADPSQ9ULU8 1353 aa18.13■□□□□ 0.49
NID2-207ENST00000557051 CFTRP13569 1480 aa18.1■□□□□ 0.49
NID2-207ENST00000557051 THOC2Q8NI27 1593 aaKnown RBP18.07■□□□□ 0.48
NID2-207ENST00000557051 ERCC6Q03468 1493 aa18.06■□□□□ 0.48
NID2-207ENST00000557051 SUPT5HO00267 1087 aaKnown RBP18.04■□□□□ 0.48
NID2-207ENST00000557051 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
NID2-207ENST00000557051 CUX2O14529 1486 aa17.98■□□□□ 0.47
NID2-207ENST00000557051 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
NID2-207ENST00000557051 CEP164Q9UPV0 1460 aa17.91■□□□□ 0.46
NID2-207ENST00000557051 WDR62O43379 1518 aa17.88■□□□□ 0.45
NID2-207ENST00000557051 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
NID2-207ENST00000557051 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
NID2-207ENST00000557051 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.45
NID2-207ENST00000557051 DNMBPQ6XZF7 1577 aa17.73■□□□□ 0.43
NID2-207ENST00000557051 TOPBP1Q92547 1522 aa17.72■□□□□ 0.43
NID2-207ENST00000557051 CUX1P39880 1505 aa17.67■□□□□ 0.42
NID2-207ENST00000557051 ABCC8Q09428 1581 aa17.63■□□□□ 0.41
NID2-207ENST00000557051 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
NID2-207ENST00000557051 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
NID2-207ENST00000557051 SYNJ1O43426 1573 aa17.57■□□□□ 0.4
NID2-207ENST00000557051 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
NID2-207ENST00000557051 WDR97A6NE52 1622 aa17.55■□□□□ 0.4
NID2-207ENST00000557051 TOP2BQ02880 1626 aa17.54■□□□□ 0.4
NID2-207ENST00000557051 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
NID2-207ENST00000557051 IFT140Q96RY7 1462 aa17.52■□□□□ 0.4
NID2-207ENST00000557051 ZNF608Q9ULD9 1512 aaPredicted RBP17.51■□□□□ 0.39
NID2-207ENST00000557051 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
NID2-207ENST00000557051 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
NID2-207ENST00000557051 EIF4G3O43432 1585 aaKnown RBP17.49■□□□□ 0.39
NID2-207ENST00000557051 SOGA1O94964 1423 aa17.41■□□□□ 0.38
NID2-207ENST00000557051 ABCA5Q8WWZ7 1642 aa17.39■□□□□ 0.37
NID2-207ENST00000557051 ABCA10Q8WWZ4 1543 aa17.38■□□□□ 0.37
NID2-207ENST00000557051 PBRM1Q86U86 1689 aa17.38■□□□□ 0.37
NID2-207ENST00000557051 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.37
NID2-207ENST00000557051 CHD1O14646 1710 aa17.31■□□□□ 0.36
NID2-207ENST00000557051 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
NID2-207ENST00000557051 GAPVD1Q14C86 1478 aa17.24■□□□□ 0.35
NID2-207ENST00000557051 GRIN2BQ13224 1484 aa17.23■□□□□ 0.35
NID2-207ENST00000557051 SNAPC4Q5SXM2 1469 aa17.23■□□□□ 0.35
NID2-207ENST00000557051 MAGI1Q96QZ7 1491 aaPredicted RBP17.2■□□□□ 0.34
NID2-207ENST00000557051 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
NID2-207ENST00000557051 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
NID2-207ENST00000557051 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
NID2-207ENST00000557051 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
NID2-207ENST00000557051 RUSC2Q8N2Y8 1516 aa17.08■□□□□ 0.32
NID2-207ENST00000557051 CUL7Q14999 1698 aa17.07■□□□□ 0.32
NID2-207ENST00000557051 CLASP1Q7Z460 1538 aa17.07■□□□□ 0.32
NID2-207ENST00000557051 KIF27Q86VH2 1401 aa17.07■□□□□ 0.32
NID2-207ENST00000557051 OSCARQ8IYS5 282 aa17.05■□□□□ 0.32
NID2-207ENST00000557051 GRIN2AQ12879 1464 aa17.05■□□□□ 0.32
NID2-207ENST00000557051 FHAD1B1AJZ9 1412 aa17.04■□□□□ 0.32
NID2-207ENST00000557051 IGF1RP08069 1367 aa17.03■□□□□ 0.32
NID2-207ENST00000557051 CEP170Q5SW79 1584 aa17.03■□□□□ 0.32
NID2-207ENST00000557051 NUP160Q12769 1436 aa16.98■□□□□ 0.31
NID2-207ENST00000557051 CHIC1Q5VXU3 224 aa16.98■□□□□ 0.31
NID2-207ENST00000557051 RIMBP3CA6NJZ7 1639 aa16.96■□□□□ 0.31
NID2-207ENST00000557051 RIMBP3BA6NNM3 1639 aa16.96■□□□□ 0.31
NID2-207ENST00000557051 RIMBP3Q9UFD9 1639 aa16.96■□□□□ 0.31
NID2-207ENST00000557051 FBLN2P98095 1184 aa16.96■□□□□ 0.31
NID2-207ENST00000557051 CHMP7Q8WUX9 453 aaPredicted RBP16.96■□□□□ 0.31
NID2-207ENST00000557051 SHROOM2Q13796 1616 aa16.93■□□□□ 0.3
NID2-207ENST00000557051 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
NID2-207ENST00000557051 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
NID2-207ENST00000557051 PRXQ9BXM0 1461 aa16.87■□□□□ 0.29
NID2-207ENST00000557051 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms