RNA–Protein interactions for RNA: ENST00000556959.1

SIPA1L1-215, Transcript of signal induced proliferation associated 1 like 1, humanhuman

TSL 3

Gene SIPA1L1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L1-215ENST00000556959 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
SIPA1L1-215ENST00000556959 ABCC9O60706 1549 aa18.75■□□□□ 0.59
SIPA1L1-215ENST00000556959 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
SIPA1L1-215ENST00000556959 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
SIPA1L1-215ENST00000556959 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.41
SIPA1L1-215ENST00000556959 DCAF8L2P0C7V8 631 aa17.51■□□□□ 0.39
SIPA1L1-215ENST00000556959 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
SIPA1L1-215ENST00000556959 UNC13AQ9UPW8 1703 aa17.43■□□□□ 0.38
SIPA1L1-215ENST00000556959 NACADO15069 1562 aa17.39■□□□□ 0.37
SIPA1L1-215ENST00000556959 BICRAQ9NZM4 1560 aa17.23■□□□□ 0.35
SIPA1L1-215ENST00000556959 MYO15BQ96JP2 1530 aa17.01■□□□□ 0.31
SIPA1L1-215ENST00000556959 ZCCHC6Q5VYS8 1495 aaKnown RBP16.99■□□□□ 0.31
SIPA1L1-215ENST00000556959 SCRIBQ14160 1630 aa16.91■□□□□ 0.3
SIPA1L1-215ENST00000556959 CC2D2AQ9P2K1 1620 aa16.89■□□□□ 0.29
SIPA1L1-215ENST00000556959 DCAF1Q9Y4B6 1507 aa16.86■□□□□ 0.29
SIPA1L1-215ENST00000556959 CECR2Q9BXF3 1484 aa16.83■□□□□ 0.28
SIPA1L1-215ENST00000556959 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
SIPA1L1-215ENST00000556959 SHROOM4Q9ULL8 1493 aa16.63■□□□□ 0.25
SIPA1L1-215ENST00000556959 DNAJC5Q9H3Z4 198 aa16.38■□□□□ 0.21
SIPA1L1-215ENST00000556959 NESP48681 1621 aa16.11■□□□□ 0.17
SIPA1L1-215ENST00000556959 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
SIPA1L1-215ENST00000556959 NCAPD3P42695 1498 aa16.08■□□□□ 0.16
SIPA1L1-215ENST00000556959 ATAD2BQ9ULI0 1458 aa16.08■□□□□ 0.16
SIPA1L1-215ENST00000556959 CUX2O14529 1486 aa16.03■□□□□ 0.16
SIPA1L1-215ENST00000556959 SMARCA4P51532 1647 aa16.02■□□□□ 0.16
SIPA1L1-215ENST00000556959 HMGXB3Q12766 1538 aa15.92■□□□□ 0.14
SIPA1L1-215ENST00000556959 SMARCA2P51531 1590 aa15.92■□□□□ 0.14
SIPA1L1-215ENST00000556959 BAZ1BQ9UIG0 1483 aaKnown RBP15.88■□□□□ 0.13
SIPA1L1-215ENST00000556959 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
SIPA1L1-215ENST00000556959 KIF21AQ7Z4S6 1674 aa15.87■□□□□ 0.13
SIPA1L1-215ENST00000556959 MROH2BQ7Z745 1585 aa15.86■□□□□ 0.13
SIPA1L1-215ENST00000556959 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
SIPA1L1-215ENST00000556959 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
SIPA1L1-215ENST00000556959 LAMC3Q9Y6N6 1575 aa15.73■□□□□ 0.11
SIPA1L1-215ENST00000556959 WIZO95785 1651 aa15.7■□□□□ 0.1
SIPA1L1-215ENST00000556959 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
SIPA1L1-215ENST00000556959 PDS5BQ9NTI5 1447 aa15.62■□□□□ 0.09
SIPA1L1-215ENST00000556959 CADPSQ9ULU8 1353 aa15.61■□□□□ 0.09
SIPA1L1-215ENST00000556959 MRC2Q9UBG0 1479 aa15.57■□□□□ 0.08
SIPA1L1-215ENST00000556959 WDR62O43379 1518 aa15.54■□□□□ 0.08
SIPA1L1-215ENST00000556959 RSF1Q96T23 1441 aaPredicted RBP15.51■□□□□ 0.07
SIPA1L1-215ENST00000556959 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
SIPA1L1-215ENST00000556959 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.06
SIPA1L1-215ENST00000556959 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
SIPA1L1-215ENST00000556959 CFTRP13569 1480 aa15.39■□□□□ 0.05
SIPA1L1-215ENST00000556959 TOP2AP11388 1531 aaKnown RBP15.38■□□□□ 0.05
SIPA1L1-215ENST00000556959 OSCARQ8IYS5 282 aa15.34■□□□□ 0.05
SIPA1L1-215ENST00000556959 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
SIPA1L1-215ENST00000556959 PRDM2Q13029 1718 aa15.27■□□□□ 0.04
SIPA1L1-215ENST00000556959 RIMBP3CA6NJZ7 1639 aa15.27■□□□□ 0.03
SIPA1L1-215ENST00000556959 RIMBP3BA6NNM3 1639 aa15.27■□□□□ 0.03
SIPA1L1-215ENST00000556959 RIMBP3Q9UFD9 1639 aa15.27■□□□□ 0.03
SIPA1L1-215ENST00000556959 CCDC88BA6NC98 1476 aa15.25■□□□□ 0.03
SIPA1L1-215ENST00000556959 TOPBP1Q92547 1522 aa15.17■□□□□ 0.02
SIPA1L1-215ENST00000556959 ARHGEF11O15085 1522 aa15.15■□□□□ 0.02
SIPA1L1-215ENST00000556959 CHD1O14646 1710 aa15.14■□□□□ 0.01
SIPA1L1-215ENST00000556959 EIF4G3O43432 1585 aaKnown RBP15.14■□□□□ 0.01
SIPA1L1-215ENST00000556959 IFT140Q96RY7 1462 aa15.14■□□□□ 0.01
SIPA1L1-215ENST00000556959 AQRO60306 1485 aaKnown RBP eCLIP15.13■□□□□ 0.01
SIPA1L1-215ENST00000556959 CYB5RLQ6IPT4 315 aa15.11■□□□□ 0.01
SIPA1L1-215ENST00000556959 TARBP1Q13395 1621 aaKnown RBP15.07■□□□□ 0
SIPA1L1-215ENST00000556959 FBLN2P98095 1184 aa15.06■□□□□ 0
SIPA1L1-215ENST00000556959 RAD54L2Q9Y4B4 1467 aa15.06■□□□□ 0
SIPA1L1-215ENST00000556959 DNMBPQ6XZF7 1577 aa15.06■□□□□ 0
SIPA1L1-215ENST00000556959 ARAP1Q96P48 1450 aa15.02■□□□□ -0
SIPA1L1-215ENST00000556959 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
SIPA1L1-215ENST00000556959 TDRD9Q8NDG6 1382 aaKnown RBP14.99□□□□□ -0.01
SIPA1L1-215ENST00000556959 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
SIPA1L1-215ENST00000556959 ABCC8Q09428 1581 aa14.94□□□□□ -0.02
SIPA1L1-215ENST00000556959 SUPT5HO00267 1087 aaKnown RBP14.93□□□□□ -0.02
SIPA1L1-215ENST00000556959 SOGA1O94964 1423 aa14.92□□□□□ -0.02
SIPA1L1-215ENST00000556959 SNAPC4Q5SXM2 1469 aa14.91□□□□□ -0.02
SIPA1L1-215ENST00000556959 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
SIPA1L1-215ENST00000556959 CUX1P39880 1505 aa14.89□□□□□ -0.03
SIPA1L1-215ENST00000556959 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
SIPA1L1-215ENST00000556959 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
SIPA1L1-215ENST00000556959 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
SIPA1L1-215ENST00000556959 PBRM1Q86U86 1689 aa14.8□□□□□ -0.04
SIPA1L1-215ENST00000556959 ERCC6L2Q5T890 1561 aa14.78□□□□□ -0.04
SIPA1L1-215ENST00000556959 SYNJ1O43426 1573 aa14.76□□□□□ -0.05
SIPA1L1-215ENST00000556959 GRIN2BQ13224 1484 aa14.76□□□□□ -0.05
SIPA1L1-215ENST00000556959 MAGI1Q96QZ7 1491 aaPredicted RBP14.74□□□□□ -0.05
SIPA1L1-215ENST00000556959 SYNJ2O15056 1496 aa14.73□□□□□ -0.05
SIPA1L1-215ENST00000556959 GAPVD1Q14C86 1478 aa14.72□□□□□ -0.05
SIPA1L1-215ENST00000556959 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
SIPA1L1-215ENST00000556959 ABCA10Q8WWZ4 1543 aa14.65□□□□□ -0.06
SIPA1L1-215ENST00000556959 CEP170Q5SW79 1584 aa14.64□□□□□ -0.07
SIPA1L1-215ENST00000556959 AEBP2Q6ZN18 517 aaPredicted RBP14.61□□□□□ -0.07
SIPA1L1-215ENST00000556959 GRIN2AQ12879 1464 aa14.6□□□□□ -0.07
SIPA1L1-215ENST00000556959 ADAMTS12P58397 1594 aa14.6□□□□□ -0.07
SIPA1L1-215ENST00000556959 WRNQ14191 1432 aaPredicted RBP eCLIP14.59□□□□□ -0.07
SIPA1L1-215ENST00000556959 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
SIPA1L1-215ENST00000556959 KIF13AQ9H1H9 1805 aa14.57□□□□□ -0.08
SIPA1L1-215ENST00000556959 BIVM-ERCC5R4GMW8 1640 aa14.55□□□□□ -0.08
SIPA1L1-215ENST00000556959 NUP160Q12769 1436 aa14.54□□□□□ -0.08
SIPA1L1-215ENST00000556959 SHROOM2Q13796 1616 aa14.53□□□□□ -0.08
SIPA1L1-215ENST00000556959 FHAD1B1AJZ9 1412 aa14.48□□□□□ -0.09
SIPA1L1-215ENST00000556959 PRG4Q92954 1404 aaPredicted RBP14.47□□□□□ -0.09
SIPA1L1-215ENST00000556959 JPH4Q96JJ6 628 aa14.44□□□□□ -0.1
SIPA1L1-215ENST00000556959 TSPOAP1O95153 1857 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms