RNA–Protein interactions for RNA: ENST00000556950.1

RGMA-209, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 4

Gene RGMA, Length 320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-209ENST00000556950 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
RGMA-209ENST00000556950 ABCC9O60706 1549 aa35.67■■■■□ 3.3
RGMA-209ENST00000556950 CCDC180Q9P1Z9 1646 aa35.45■■■■□ 3.27
RGMA-209ENST00000556950 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
RGMA-209ENST00000556950 DCAF8L2P0C7V8 631 aa33.63■■■□□ 2.97
RGMA-209ENST00000556950 NACADO15069 1562 aa33.58■■■□□ 2.97
RGMA-209ENST00000556950 DNAJC5BQ9UF47 199 aa33.47■■■□□ 2.95
RGMA-209ENST00000556950 PABPN1Q86U42 306 aaKnown RBP eCLIP33.25■■■□□ 2.91
RGMA-209ENST00000556950 MYO15BQ96JP2 1530 aa33.04■■■□□ 2.88
RGMA-209ENST00000556950 UNC13AQ9UPW8 1703 aa32.95■■■□□ 2.87
RGMA-209ENST00000556950 BICRAQ9NZM4 1560 aa32.8■■■□□ 2.84
RGMA-209ENST00000556950 ZCCHC6Q5VYS8 1495 aaKnown RBP32.76■■■□□ 2.84
RGMA-209ENST00000556950 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
RGMA-209ENST00000556950 SCRIBQ14160 1630 aa32.41■■■□□ 2.78
RGMA-209ENST00000556950 SHROOM4Q9ULL8 1493 aa32.36■■■□□ 2.77
RGMA-209ENST00000556950 CC2D2AQ9P2K1 1620 aa32.13■■■□□ 2.73
RGMA-209ENST00000556950 CECR2Q9BXF3 1484 aa32.11■■■□□ 2.73
RGMA-209ENST00000556950 EIF4G1Q04637 1599 aaKnown RBP32.05■■■□□ 2.72
RGMA-209ENST00000556950 NCAPD3P42695 1498 aa31.01■■■□□ 2.55
RGMA-209ENST00000556950 ATAD2BQ9ULI0 1458 aa30.93■■■□□ 2.54
RGMA-209ENST00000556950 SMARCA4P51532 1647 aa30.85■■■□□ 2.53
RGMA-209ENST00000556950 SMARCA2P51531 1590 aa30.83■■■□□ 2.53
RGMA-209ENST00000556950 ERCC6Q03468 1493 aa30.83■■■□□ 2.53
RGMA-209ENST00000556950 DNAJC5Q9H3Z4 198 aa30.79■■■□□ 2.52
RGMA-209ENST00000556950 HMGXB3Q12766 1538 aa30.75■■■□□ 2.51
RGMA-209ENST00000556950 BAZ1AQ9NRL2 1556 aaPredicted RBP30.71■■■□□ 2.51
RGMA-209ENST00000556950 CUX2O14529 1486 aa30.7■■■□□ 2.51
RGMA-209ENST00000556950 BAZ1BQ9UIG0 1483 aaKnown RBP30.67■■■□□ 2.5
RGMA-209ENST00000556950 NESP48681 1621 aa30.58■■■□□ 2.49
RGMA-209ENST00000556950 PEG3Q9GZU2 1588 aa30.5■■■□□ 2.47
RGMA-209ENST00000556950 MROH2BQ7Z745 1585 aa30.49■■■□□ 2.47
RGMA-209ENST00000556950 LAMC3Q9Y6N6 1575 aa30.31■■■□□ 2.44
RGMA-209ENST00000556950 PDS5BQ9NTI5 1447 aa30.22■■■□□ 2.43
RGMA-209ENST00000556950 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
RGMA-209ENST00000556950 KIF21AQ7Z4S6 1674 aa30.12■■■□□ 2.41
RGMA-209ENST00000556950 CADPSQ9ULU8 1353 aa30.11■■■□□ 2.41
RGMA-209ENST00000556950 WIZO95785 1651 aa30.11■■■□□ 2.41
RGMA-209ENST00000556950 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
RGMA-209ENST00000556950 RSF1Q96T23 1441 aaPredicted RBP29.86■■■□□ 2.37
RGMA-209ENST00000556950 CEP164Q9UPV0 1460 aa29.82■■■□□ 2.36
RGMA-209ENST00000556950 WDR62O43379 1518 aa29.81■■■□□ 2.36
RGMA-209ENST00000556950 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
RGMA-209ENST00000556950 TOP2AP11388 1531 aaKnown RBP29.74■■■□□ 2.35
RGMA-209ENST00000556950 CFTRP13569 1480 aa29.72■■■□□ 2.35
RGMA-209ENST00000556950 TRIM41Q8WV44 630 aa29.55■■■□□ 2.32
RGMA-209ENST00000556950 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.32
RGMA-209ENST00000556950 CCDC88BA6NC98 1476 aa29.42■■■□□ 2.3
RGMA-209ENST00000556950 OSCARQ8IYS5 282 aa29.37■■■□□ 2.29
RGMA-209ENST00000556950 PRDM2Q13029 1718 aa29.31■■■□□ 2.28
RGMA-209ENST00000556950 IFT140Q96RY7 1462 aa29.22■■■□□ 2.27
RGMA-209ENST00000556950 TOPBP1Q92547 1522 aa29.18■■■□□ 2.26
RGMA-209ENST00000556950 ZNF608Q9ULD9 1512 aaPredicted RBP29.17■■■□□ 2.26
RGMA-209ENST00000556950 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
RGMA-209ENST00000556950 DNMBPQ6XZF7 1577 aa29.05■■■□□ 2.24
RGMA-209ENST00000556950 EIF4G3O43432 1585 aaKnown RBP28.97■■■□□ 2.23
RGMA-209ENST00000556950 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
RGMA-209ENST00000556950 AQRO60306 1485 aaKnown RBP eCLIP28.93■■■□□ 2.22
RGMA-209ENST00000556950 RIMBP3CA6NJZ7 1639 aa28.91■■■□□ 2.22
RGMA-209ENST00000556950 RIMBP3BA6NNM3 1639 aa28.91■■■□□ 2.22
RGMA-209ENST00000556950 RIMBP3Q9UFD9 1639 aa28.91■■■□□ 2.22
RGMA-209ENST00000556950 POLA1P09884 1462 aaPredicted RBP28.88■■■□□ 2.21
RGMA-209ENST00000556950 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
RGMA-209ENST00000556950 FBLN2P98095 1184 aa28.87■■■□□ 2.21
RGMA-209ENST00000556950 ARHGEF11O15085 1522 aa28.83■■■□□ 2.21
RGMA-209ENST00000556950 RAD54L2Q9Y4B4 1467 aa28.82■■■□□ 2.2
RGMA-209ENST00000556950 SOGA1O94964 1423 aa28.8■■■□□ 2.2
RGMA-209ENST00000556950 TDRD9Q8NDG6 1382 aaKnown RBP28.76■■■□□ 2.2
RGMA-209ENST00000556950 CHD1O14646 1710 aa28.74■■■□□ 2.19
RGMA-209ENST00000556950 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
RGMA-209ENST00000556950 FGD5Q6ZNL6 1462 aa28.72■■■□□ 2.19
RGMA-209ENST00000556950 CUX1P39880 1505 aa28.65■■■□□ 2.18
RGMA-209ENST00000556950 SNAPC4Q5SXM2 1469 aa28.64■■■□□ 2.17
RGMA-209ENST00000556950 CHMP7Q8WUX9 453 aaPredicted RBP28.6■■■□□ 2.17
RGMA-209ENST00000556950 WDR97A6NE52 1622 aa28.56■■■□□ 2.16
RGMA-209ENST00000556950 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
RGMA-209ENST00000556950 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
RGMA-209ENST00000556950 MAGI1Q96QZ7 1491 aaPredicted RBP28.52■■■□□ 2.16
RGMA-209ENST00000556950 TRHP20396 242 aaPredicted RBP28.48■■■□□ 2.15
RGMA-209ENST00000556950 SYNJ1O43426 1573 aa28.45■■■□□ 2.14
RGMA-209ENST00000556950 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
RGMA-209ENST00000556950 GAPVD1Q14C86 1478 aa28.43■■■□□ 2.14
RGMA-209ENST00000556950 CLASP1Q7Z460 1538 aa28.42■■■□□ 2.14
RGMA-209ENST00000556950 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
RGMA-209ENST00000556950 PBRM1Q86U86 1689 aa28.34■■■□□ 2.13
RGMA-209ENST00000556950 WRNQ14191 1432 aaPredicted RBP eCLIP28.28■■■□□ 2.12
RGMA-209ENST00000556950 ABCA5Q8WWZ7 1642 aa28.28■■■□□ 2.12
RGMA-209ENST00000556950 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
RGMA-209ENST00000556950 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
RGMA-209ENST00000556950 BIVM-ERCC5R4GMW8 1640 aa28.13■■■□□ 2.09
RGMA-209ENST00000556950 ADAMTS12P58397 1594 aa28.1■■■□□ 2.09
RGMA-209ENST00000556950 FHAD1B1AJZ9 1412 aa28.07■■■□□ 2.08
RGMA-209ENST00000556950 NUP160Q12769 1436 aa28.04■■■□□ 2.08
RGMA-209ENST00000556950 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
RGMA-209ENST00000556950 ERCC6L2Q5T890 1561 aa28.01■■■□□ 2.07
RGMA-209ENST00000556950 ERICH3Q5RHP9 1530 aa27.99■■■□□ 2.07
RGMA-209ENST00000556950 SHROOM2Q13796 1616 aa27.85■■■□□ 2.05
RGMA-209ENST00000556950 PRG4Q92954 1404 aaPredicted RBP27.84■■■□□ 2.05
RGMA-209ENST00000556950 JPH4Q96JJ6 628 aa27.83■■■□□ 2.05
RGMA-209ENST00000556950 AEBP2Q6ZN18 517 aaPredicted RBP27.71■■■□□ 2.03
RGMA-209ENST00000556950 RUSC2Q8N2Y8 1516 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms