RNA–Protein interactions for RNA: ENST00000556853.5

CNOT10-219, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 4

Gene CNOT10, Length 551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-219ENST00000556853 NISCHQ9Y2I1 1504 aa32.16■■■□□ 2.74
CNOT10-219ENST00000556853 ABCC9O60706 1549 aa30.47■■■□□ 2.47
CNOT10-219ENST00000556853 DNAJC5BQ9UF47 199 aa29.69■■■□□ 2.34
CNOT10-219ENST00000556853 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
CNOT10-219ENST00000556853 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
CNOT10-219ENST00000556853 PABPN1Q86U42 306 aaKnown RBP eCLIP28.19■■■□□ 2.1
CNOT10-219ENST00000556853 DNAJC5Q9H3Z4 198 aa28.1■■■□□ 2.09
CNOT10-219ENST00000556853 NACADO15069 1562 aa28.03■■■□□ 2.08
CNOT10-219ENST00000556853 UNC13AQ9UPW8 1703 aa27.87■■■□□ 2.05
CNOT10-219ENST00000556853 BICRAQ9NZM4 1560 aa27.75■■■□□ 2.03
CNOT10-219ENST00000556853 DCAF8L2P0C7V8 631 aa27.59■■■□□ 2.01
CNOT10-219ENST00000556853 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
CNOT10-219ENST00000556853 CC2D2AQ9P2K1 1620 aa27.49■■□□□ 1.99
CNOT10-219ENST00000556853 MYO15BQ96JP2 1530 aa27.29■■□□□ 1.96
CNOT10-219ENST00000556853 SHROOM4Q9ULL8 1493 aa27.24■■□□□ 1.95
CNOT10-219ENST00000556853 EIF4G1Q04637 1599 aaKnown RBP27.14■■□□□ 1.94
CNOT10-219ENST00000556853 CUX2O14529 1486 aa26.76■■□□□ 1.87
CNOT10-219ENST00000556853 SCRIBQ14160 1630 aa26.65■■□□□ 1.86
CNOT10-219ENST00000556853 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
CNOT10-219ENST00000556853 ZCCHC6Q5VYS8 1495 aaKnown RBP26.4■■□□□ 1.82
CNOT10-219ENST00000556853 ERCC6Q03468 1493 aa26.37■■□□□ 1.81
CNOT10-219ENST00000556853 TRIM41Q8WV44 630 aa26.32■■□□□ 1.8
CNOT10-219ENST00000556853 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
CNOT10-219ENST00000556853 NESP48681 1621 aa25.87■■□□□ 1.73
CNOT10-219ENST00000556853 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
CNOT10-219ENST00000556853 ATAD2BQ9ULI0 1458 aa25.66■■□□□ 1.7
CNOT10-219ENST00000556853 HMGXB3Q12766 1538 aa25.59■■□□□ 1.69
CNOT10-219ENST00000556853 SMARCA2P51531 1590 aa25.56■■□□□ 1.68
CNOT10-219ENST00000556853 LAMC3Q9Y6N6 1575 aa25.49■■□□□ 1.67
CNOT10-219ENST00000556853 KIF21AQ7Z4S6 1674 aa25.48■■□□□ 1.67
CNOT10-219ENST00000556853 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
CNOT10-219ENST00000556853 BAZ1AQ9NRL2 1556 aaPredicted RBP25.37■■□□□ 1.65
CNOT10-219ENST00000556853 OSCARQ8IYS5 282 aa25.34■■□□□ 1.65
CNOT10-219ENST00000556853 SMARCA4P51532 1647 aa25.33■■□□□ 1.65
CNOT10-219ENST00000556853 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
CNOT10-219ENST00000556853 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
CNOT10-219ENST00000556853 WDR62O43379 1518 aa25.22■■□□□ 1.63
CNOT10-219ENST00000556853 RIMBP3CA6NJZ7 1639 aa25.14■■□□□ 1.61
CNOT10-219ENST00000556853 RIMBP3BA6NNM3 1639 aa25.14■■□□□ 1.61
CNOT10-219ENST00000556853 RIMBP3Q9UFD9 1639 aa25.14■■□□□ 1.61
CNOT10-219ENST00000556853 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
CNOT10-219ENST00000556853 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
CNOT10-219ENST00000556853 AEBP2Q6ZN18 517 aaPredicted RBP25.03■■□□□ 1.6
CNOT10-219ENST00000556853 ARHGEF11O15085 1522 aa24.94■■□□□ 1.58
CNOT10-219ENST00000556853 TRHP20396 242 aaPredicted RBP24.9■■□□□ 1.58
CNOT10-219ENST00000556853 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.57
CNOT10-219ENST00000556853 CYB5RLQ6IPT4 315 aa24.82■■□□□ 1.56
CNOT10-219ENST00000556853 MROH2BQ7Z745 1585 aa24.77■■□□□ 1.56
CNOT10-219ENST00000556853 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
CNOT10-219ENST00000556853 URB2Q14146 1524 aaKnown RBP24.65■■□□□ 1.54
CNOT10-219ENST00000556853 ARAP1Q96P48 1450 aa24.63■■□□□ 1.53
CNOT10-219ENST00000556853 ZNF608Q9ULD9 1512 aaPredicted RBP24.54■■□□□ 1.52
CNOT10-219ENST00000556853 CFTRP13569 1480 aa24.53■■□□□ 1.52
CNOT10-219ENST00000556853 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
CNOT10-219ENST00000556853 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
CNOT10-219ENST00000556853 WIZO95785 1651 aa24.4■■□□□ 1.5
CNOT10-219ENST00000556853 CHD1O14646 1710 aa24.35■■□□□ 1.49
CNOT10-219ENST00000556853 EIF4G3O43432 1585 aaKnown RBP24.32■■□□□ 1.48
CNOT10-219ENST00000556853 FBLN2P98095 1184 aa24.19■■□□□ 1.46
CNOT10-219ENST00000556853 ILDR1Q86SU0 546 aaPredicted RBP24.18■■□□□ 1.46
CNOT10-219ENST00000556853 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
CNOT10-219ENST00000556853 PRDM2Q13029 1718 aa24.16■■□□□ 1.46
CNOT10-219ENST00000556853 AQRO60306 1485 aaKnown RBP eCLIP24.16■■□□□ 1.46
CNOT10-219ENST00000556853 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
CNOT10-219ENST00000556853 TARBP1Q13395 1621 aaKnown RBP24.06■■□□□ 1.44
CNOT10-219ENST00000556853 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
CNOT10-219ENST00000556853 TOP2AP11388 1531 aaKnown RBP24■■□□□ 1.43
CNOT10-219ENST00000556853 DNMBPQ6XZF7 1577 aa23.97■■□□□ 1.43
CNOT10-219ENST00000556853 SYNJ1O43426 1573 aa23.92■■□□□ 1.42
CNOT10-219ENST00000556853 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
CNOT10-219ENST00000556853 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
CNOT10-219ENST00000556853 POLA1P09884 1462 aaPredicted RBP23.85■■□□□ 1.41
CNOT10-219ENST00000556853 CHMP7Q8WUX9 453 aaPredicted RBP23.84■■□□□ 1.41
CNOT10-219ENST00000556853 TDRD9Q8NDG6 1382 aaKnown RBP23.82■■□□□ 1.4
CNOT10-219ENST00000556853 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
CNOT10-219ENST00000556853 CCDC88BA6NC98 1476 aa23.76■■□□□ 1.39
CNOT10-219ENST00000556853 MAGI1Q96QZ7 1491 aaPredicted RBP23.76■■□□□ 1.39
CNOT10-219ENST00000556853 KDM4FA0A1W2PPD8 638 aa23.73■■□□□ 1.39
CNOT10-219ENST00000556853 SOGA1O94964 1423 aa23.72■■□□□ 1.39
CNOT10-219ENST00000556853 WDR97A6NE52 1622 aa23.72■■□□□ 1.39
CNOT10-219ENST00000556853 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
CNOT10-219ENST00000556853 KIF13AQ9H1H9 1805 aa23.69■■□□□ 1.38
CNOT10-219ENST00000556853 GRIN2BQ13224 1484 aa23.64■■□□□ 1.38
CNOT10-219ENST00000556853 ERCC6L2Q5T890 1561 aa23.61■■□□□ 1.37
CNOT10-219ENST00000556853 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
CNOT10-219ENST00000556853 PBRM1Q86U86 1689 aa23.45■■□□□ 1.34
CNOT10-219ENST00000556853 CEP170Q5SW79 1584 aa23.45■■□□□ 1.34
CNOT10-219ENST00000556853 FAM69CQ0P6D2 419 aa23.43■■□□□ 1.34
CNOT10-219ENST00000556853 ABCC10Q5T3U5 1492 aa23.42■■□□□ 1.34
CNOT10-219ENST00000556853 KDM6BO15054 1643 aa23.41■■□□□ 1.34
CNOT10-219ENST00000556853 SHROOM2Q13796 1616 aa23.35■■□□□ 1.33
CNOT10-219ENST00000556853 GRIN2AQ12879 1464 aa23.34■■□□□ 1.33
CNOT10-219ENST00000556853 CUX1P39880 1505 aa23.33■■□□□ 1.33
CNOT10-219ENST00000556853 NUP160Q12769 1436 aa23.33■■□□□ 1.32
CNOT10-219ENST00000556853 DIP2BQ9P265 1576 aa23.31■■□□□ 1.32
CNOT10-219ENST00000556853 HECW2Q9P2P5 1572 aa23.28■■□□□ 1.32
CNOT10-219ENST00000556853 ABCA5Q8WWZ7 1642 aa23.27■■□□□ 1.32
CNOT10-219ENST00000556853 MAPKBP1O60336 1514 aa23.27■■□□□ 1.32
CNOT10-219ENST00000556853 ADGRL1O94910 1474 aa23.23■■□□□ 1.31
CNOT10-219ENST00000556853 FBXO41Q8TF61 875 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms