RNA–Protein interactions for RNA: ENST00000556761.1

ZFYVE1-209, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 4

Gene ZFYVE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-209ENST00000556761 NISCHQ9Y2I1 1504 aa47.22■■■■■ 5.15
ZFYVE1-209ENST00000556761 CCDC180Q9P1Z9 1646 aa42.12■■■■■ 4.33
ZFYVE1-209ENST00000556761 ABCC9O60706 1549 aa41.62■■■■■ 4.25
ZFYVE1-209ENST00000556761 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
ZFYVE1-209ENST00000556761 NACADO15069 1562 aa39.72■■■■□ 3.95
ZFYVE1-209ENST00000556761 DCAF8L2P0C7V8 631 aa39.5■■■■□ 3.91
ZFYVE1-209ENST00000556761 MYO15BQ96JP2 1530 aa39.4■■■■□ 3.9
ZFYVE1-209ENST00000556761 ZCCHC6Q5VYS8 1495 aaKnown RBP39.24■■■■□ 3.87
ZFYVE1-209ENST00000556761 DCAF1Q9Y4B6 1507 aa39.08■■■■□ 3.85
ZFYVE1-209ENST00000556761 UNC13AQ9UPW8 1703 aa38.94■■■■□ 3.82
ZFYVE1-209ENST00000556761 PABPN1Q86U42 306 aaKnown RBP eCLIP38.84■■■■□ 3.81
ZFYVE1-209ENST00000556761 BICRAQ9NZM4 1560 aa38.74■■■■□ 3.79
ZFYVE1-209ENST00000556761 DNAJC5BQ9UF47 199 aa38.72■■■■□ 3.79
ZFYVE1-209ENST00000556761 SCRIBQ14160 1630 aa38.36■■■■□ 3.73
ZFYVE1-209ENST00000556761 SHROOM4Q9ULL8 1493 aa38.26■■■■□ 3.72
ZFYVE1-209ENST00000556761 EIF4G1Q04637 1599 aaKnown RBP37.7■■■■□ 3.63
ZFYVE1-209ENST00000556761 CC2D2AQ9P2K1 1620 aa37.65■■■■□ 3.62
ZFYVE1-209ENST00000556761 CECR2Q9BXF3 1484 aa37.45■■■■□ 3.59
ZFYVE1-209ENST00000556761 NCAPD3P42695 1498 aa36.71■■■■□ 3.47
ZFYVE1-209ENST00000556761 SMARCA4P51532 1647 aa36.7■■■■□ 3.47
ZFYVE1-209ENST00000556761 ATAD2BQ9ULI0 1458 aa36.65■■■■□ 3.46
ZFYVE1-209ENST00000556761 BAZ1AQ9NRL2 1556 aaPredicted RBP36.58■■■■□ 3.45
ZFYVE1-209ENST00000556761 SMARCA2P51531 1590 aa36.53■■■■□ 3.44
ZFYVE1-209ENST00000556761 HMGXB3Q12766 1538 aa36.44■■■■□ 3.42
ZFYVE1-209ENST00000556761 PEG3Q9GZU2 1588 aa36.4■■■■□ 3.42
ZFYVE1-209ENST00000556761 MROH2BQ7Z745 1585 aa36.39■■■■□ 3.42
ZFYVE1-209ENST00000556761 BAZ1BQ9UIG0 1483 aaKnown RBP36.25■■■■□ 3.39
ZFYVE1-209ENST00000556761 WIZO95785 1651 aa35.94■■■■□ 3.34
ZFYVE1-209ENST00000556761 NESP48681 1621 aa35.93■■■■□ 3.34
ZFYVE1-209ENST00000556761 ERCC6Q03468 1493 aa35.85■■■■□ 3.33
ZFYVE1-209ENST00000556761 RSF1Q96T23 1441 aaPredicted RBP35.83■■■■□ 3.33
ZFYVE1-209ENST00000556761 LAMC3Q9Y6N6 1575 aa35.74■■■■□ 3.31
ZFYVE1-209ENST00000556761 CUX2O14529 1486 aa35.7■■■■□ 3.31
ZFYVE1-209ENST00000556761 CADPSQ9ULU8 1353 aa35.6■■■■□ 3.29
ZFYVE1-209ENST00000556761 TOP2AP11388 1531 aaKnown RBP35.52■■■■□ 3.28
ZFYVE1-209ENST00000556761 PDS5BQ9NTI5 1447 aa35.52■■■■□ 3.28
ZFYVE1-209ENST00000556761 THOC2Q8NI27 1593 aaKnown RBP35.47■■■■□ 3.27
ZFYVE1-209ENST00000556761 KIF21AQ7Z4S6 1674 aa35.43■■■■□ 3.26
ZFYVE1-209ENST00000556761 CFTRP13569 1480 aa35.3■■■■□ 3.24
ZFYVE1-209ENST00000556761 MRC2Q9UBG0 1479 aa35.18■■■■□ 3.22
ZFYVE1-209ENST00000556761 DNAJC5Q9H3Z4 198 aa35.17■■■■□ 3.22
ZFYVE1-209ENST00000556761 FANCD2Q9BXW9 1451 aa35.16■■■■□ 3.22
ZFYVE1-209ENST00000556761 CCDC88BA6NC98 1476 aa35.15■■■■□ 3.22
ZFYVE1-209ENST00000556761 CEP164Q9UPV0 1460 aa35.12■■■■□ 3.21
ZFYVE1-209ENST00000556761 WDR62O43379 1518 aa35.11■■■■□ 3.21
ZFYVE1-209ENST00000556761 PRDM2Q13029 1718 aa34.9■■■■□ 3.18
ZFYVE1-209ENST00000556761 URB2Q14146 1524 aaKnown RBP34.86■■■■□ 3.17
ZFYVE1-209ENST00000556761 TOPBP1Q92547 1522 aa34.55■■■■□ 3.12
ZFYVE1-209ENST00000556761 ABCC8Q09428 1581 aa34.5■■■■□ 3.11
ZFYVE1-209ENST00000556761 SUPT5HO00267 1087 aaKnown RBP34.49■■■■□ 3.11
ZFYVE1-209ENST00000556761 DNMBPQ6XZF7 1577 aa34.46■■■■□ 3.11
ZFYVE1-209ENST00000556761 IFT140Q96RY7 1462 aa34.43■■■■□ 3.1
ZFYVE1-209ENST00000556761 ZNF608Q9ULD9 1512 aaPredicted RBP34.35■■■■□ 3.09
ZFYVE1-209ENST00000556761 POLA1P09884 1462 aaPredicted RBP34.24■■■■□ 3.07
ZFYVE1-209ENST00000556761 TARBP1Q13395 1621 aaKnown RBP34.23■■■■□ 3.07
ZFYVE1-209ENST00000556761 CUX1P39880 1505 aa34.15■■■■□ 3.06
ZFYVE1-209ENST00000556761 OSCARQ8IYS5 282 aa34.14■■■■□ 3.06
ZFYVE1-209ENST00000556761 EIF4G3O43432 1585 aaKnown RBP34.14■■■■□ 3.06
ZFYVE1-209ENST00000556761 RAD54L2Q9Y4B4 1467 aa34.1■■■■□ 3.05
ZFYVE1-209ENST00000556761 AQRO60306 1485 aaKnown RBP eCLIP34.08■■■■□ 3.05
ZFYVE1-209ENST00000556761 SOGA1O94964 1423 aa34.08■■■■□ 3.05
ZFYVE1-209ENST00000556761 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.05
ZFYVE1-209ENST00000556761 TDRD9Q8NDG6 1382 aaKnown RBP33.95■■■■□ 3.02
ZFYVE1-209ENST00000556761 WDR97A6NE52 1622 aa33.9■■■■□ 3.02
ZFYVE1-209ENST00000556761 CHD1O14646 1710 aa33.77■■■■□ 3
ZFYVE1-209ENST00000556761 ABCA10Q8WWZ4 1543 aa33.75■■■□□ 2.99
ZFYVE1-209ENST00000556761 WRNQ14191 1432 aaPredicted RBP eCLIP33.74■■■□□ 2.99
ZFYVE1-209ENST00000556761 GRIN2BQ13224 1484 aa33.73■■■□□ 2.99
ZFYVE1-209ENST00000556761 SNAPC4Q5SXM2 1469 aa33.73■■■□□ 2.99
ZFYVE1-209ENST00000556761 TOP2BQ02880 1626 aa33.72■■■□□ 2.99
ZFYVE1-209ENST00000556761 BIVM-ERCC5R4GMW8 1640 aa33.71■■■□□ 2.99
ZFYVE1-209ENST00000556761 TRIM41Q8WV44 630 aa33.7■■■□□ 2.99
ZFYVE1-209ENST00000556761 SYNJ1O43426 1573 aa33.69■■■□□ 2.98
ZFYVE1-209ENST00000556761 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
ZFYVE1-209ENST00000556761 FBLN2P98095 1184 aa33.67■■■□□ 2.98
ZFYVE1-209ENST00000556761 GAPVD1Q14C86 1478 aa33.67■■■□□ 2.98
ZFYVE1-209ENST00000556761 ABCA5Q8WWZ7 1642 aa33.64■■■□□ 2.98
ZFYVE1-209ENST00000556761 RIMBP3CA6NJZ7 1639 aa33.63■■■□□ 2.97
ZFYVE1-209ENST00000556761 RIMBP3BA6NNM3 1639 aa33.63■■■□□ 2.97
ZFYVE1-209ENST00000556761 RIMBP3Q9UFD9 1639 aa33.63■■■□□ 2.97
ZFYVE1-209ENST00000556761 ARHGEF11O15085 1522 aa33.59■■■□□ 2.97
ZFYVE1-209ENST00000556761 PBRM1Q86U86 1689 aa33.58■■■□□ 2.97
ZFYVE1-209ENST00000556761 SYNJ2O15056 1496 aa33.56■■■□□ 2.96
ZFYVE1-209ENST00000556761 CHMP7Q8WUX9 453 aaPredicted RBP33.55■■■□□ 2.96
ZFYVE1-209ENST00000556761 CLASP1Q7Z460 1538 aa33.48■■■□□ 2.95
ZFYVE1-209ENST00000556761 ADAMTS12P58397 1594 aa33.34■■■□□ 2.93
ZFYVE1-209ENST00000556761 ERICH3Q5RHP9 1530 aa33.33■■■□□ 2.93
ZFYVE1-209ENST00000556761 ARAP1Q96P48 1450 aa33.32■■■□□ 2.92
ZFYVE1-209ENST00000556761 CYB5RLQ6IPT4 315 aa33.29■■■□□ 2.92
ZFYVE1-209ENST00000556761 GRIN2AQ12879 1464 aa33.29■■■□□ 2.92
ZFYVE1-209ENST00000556761 FHAD1B1AJZ9 1412 aa33.28■■■□□ 2.92
ZFYVE1-209ENST00000556761 NUP160Q12769 1436 aa33.21■■■□□ 2.91
ZFYVE1-209ENST00000556761 CEP170Q5SW79 1584 aa33.15■■■□□ 2.9
ZFYVE1-209ENST00000556761 IGF1RP08069 1367 aa33.06■■■□□ 2.88
ZFYVE1-209ENST00000556761 KIF27Q86VH2 1401 aa33.05■■■□□ 2.88
ZFYVE1-209ENST00000556761 SHROOM2Q13796 1616 aa32.99■■■□□ 2.87
ZFYVE1-209ENST00000556761 ERCC6L2Q5T890 1561 aa32.97■■■□□ 2.87
ZFYVE1-209ENST00000556761 CUL7Q14999 1698 aa32.89■■■□□ 2.86
ZFYVE1-209ENST00000556761 RUSC2Q8N2Y8 1516 aa32.84■■■□□ 2.85
ZFYVE1-209ENST00000556761 JPH4Q96JJ6 628 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms