RNA–Protein interactions for RNA: ENST00000556715.6

SLC25A29-216, Transcript of solute carrier family 25 member 29, humanhuman

TSL 3

Gene SLC25A29, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A29-216ENST00000556715 NISCHQ9Y2I1 1504 aa49.19■■■■■ 5.46
SLC25A29-216ENST00000556715 CCDC180Q9P1Z9 1646 aa43.93■■■■■ 4.62
SLC25A29-216ENST00000556715 ABCC9O60706 1549 aa42.97■■■■■ 4.47
SLC25A29-216ENST00000556715 RB1CC1Q8TDY2 1594 aa41.37■■■■■ 4.21
SLC25A29-216ENST00000556715 NACADO15069 1562 aa41.29■■■■■ 4.2
SLC25A29-216ENST00000556715 MYO15BQ96JP2 1530 aa41.06■■■■■ 4.16
SLC25A29-216ENST00000556715 ZCCHC6Q5VYS8 1495 aaKnown RBP40.99■■■■■ 4.15
SLC25A29-216ENST00000556715 DCAF8L2P0C7V8 631 aa40.9■■■■■ 4.14
SLC25A29-216ENST00000556715 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
SLC25A29-216ENST00000556715 UNC13AQ9UPW8 1703 aa40.37■■■■■ 4.05
SLC25A29-216ENST00000556715 BICRAQ9NZM4 1560 aa40.1■■■■■ 4.01
SLC25A29-216ENST00000556715 PABPN1Q86U42 306 aaKnown RBP eCLIP40.01■■■■■ 4
SLC25A29-216ENST00000556715 SCRIBQ14160 1630 aa39.94■■■■□ 3.98
SLC25A29-216ENST00000556715 SHROOM4Q9ULL8 1493 aa39.83■■■■□ 3.97
SLC25A29-216ENST00000556715 DNAJC5BQ9UF47 199 aa39.49■■■■□ 3.91
SLC25A29-216ENST00000556715 EIF4G1Q04637 1599 aaKnown RBP39.07■■■■□ 3.84
SLC25A29-216ENST00000556715 CC2D2AQ9P2K1 1620 aa38.92■■■■□ 3.82
SLC25A29-216ENST00000556715 CECR2Q9BXF3 1484 aa38.68■■■■□ 3.78
SLC25A29-216ENST00000556715 SMARCA4P51532 1647 aa38.23■■■■□ 3.71
SLC25A29-216ENST00000556715 BAZ1AQ9NRL2 1556 aaPredicted RBP38.18■■■■□ 3.7
SLC25A29-216ENST00000556715 NCAPD3P42695 1498 aa38.07■■■■□ 3.68
SLC25A29-216ENST00000556715 SMARCA2P51531 1590 aa38.05■■■■□ 3.68
SLC25A29-216ENST00000556715 ATAD2BQ9ULI0 1458 aa38.04■■■■□ 3.68
SLC25A29-216ENST00000556715 HMGXB3Q12766 1538 aa37.94■■■■□ 3.66
SLC25A29-216ENST00000556715 PEG3Q9GZU2 1588 aa37.92■■■■□ 3.66
SLC25A29-216ENST00000556715 MROH2BQ7Z745 1585 aa37.86■■■■□ 3.65
SLC25A29-216ENST00000556715 BAZ1BQ9UIG0 1483 aaKnown RBP37.73■■■■□ 3.63
SLC25A29-216ENST00000556715 WIZO95785 1651 aa37.42■■■■□ 3.58
SLC25A29-216ENST00000556715 RSF1Q96T23 1441 aaPredicted RBP37.36■■■■□ 3.57
SLC25A29-216ENST00000556715 LAMC3Q9Y6N6 1575 aa37.13■■■■□ 3.53
SLC25A29-216ENST00000556715 TOP2AP11388 1531 aaKnown RBP37.12■■■■□ 3.53
SLC25A29-216ENST00000556715 NESP48681 1621 aa37.12■■■■□ 3.53
SLC25A29-216ENST00000556715 ERCC6Q03468 1493 aa37.1■■■■□ 3.53
SLC25A29-216ENST00000556715 CADPSQ9ULU8 1353 aa36.91■■■■□ 3.5
SLC25A29-216ENST00000556715 CUX2O14529 1486 aa36.86■■■■□ 3.49
SLC25A29-216ENST00000556715 PDS5BQ9NTI5 1447 aa36.84■■■■□ 3.49
SLC25A29-216ENST00000556715 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
SLC25A29-216ENST00000556715 THOC2Q8NI27 1593 aaKnown RBP36.74■■■■□ 3.47
SLC25A29-216ENST00000556715 CFTRP13569 1480 aa36.69■■■■□ 3.46
SLC25A29-216ENST00000556715 CCDC88BA6NC98 1476 aa36.58■■■■□ 3.45
SLC25A29-216ENST00000556715 CEP164Q9UPV0 1460 aa36.5■■■■□ 3.43
SLC25A29-216ENST00000556715 FANCD2Q9BXW9 1451 aa36.5■■■■□ 3.43
SLC25A29-216ENST00000556715 MRC2Q9UBG0 1479 aa36.5■■■■□ 3.43
SLC25A29-216ENST00000556715 PRDM2Q13029 1718 aa36.45■■■■□ 3.43
SLC25A29-216ENST00000556715 WDR62O43379 1518 aa36.42■■■■□ 3.42
SLC25A29-216ENST00000556715 DNAJC5Q9H3Z4 198 aa36.18■■■■□ 3.38
SLC25A29-216ENST00000556715 URB2Q14146 1524 aaKnown RBP36.14■■■■□ 3.38
SLC25A29-216ENST00000556715 SUPT5HO00267 1087 aaKnown RBP36.09■■■■□ 3.37
SLC25A29-216ENST00000556715 ABCC8Q09428 1581 aa35.93■■■■□ 3.34
SLC25A29-216ENST00000556715 TOPBP1Q92547 1522 aa35.9■■■■□ 3.34
SLC25A29-216ENST00000556715 DNMBPQ6XZF7 1577 aa35.89■■■■□ 3.34
SLC25A29-216ENST00000556715 IFT140Q96RY7 1462 aa35.76■■■■□ 3.32
SLC25A29-216ENST00000556715 POLA1P09884 1462 aaPredicted RBP35.59■■■■□ 3.29
SLC25A29-216ENST00000556715 TARBP1Q13395 1621 aaKnown RBP35.55■■■■□ 3.28
SLC25A29-216ENST00000556715 CUX1P39880 1505 aa35.55■■■■□ 3.28
SLC25A29-216ENST00000556715 ZNF608Q9ULD9 1512 aaPredicted RBP35.52■■■■□ 3.28
SLC25A29-216ENST00000556715 EIF4G3O43432 1585 aaKnown RBP35.47■■■■□ 3.27
SLC25A29-216ENST00000556715 FGD5Q6ZNL6 1462 aa35.47■■■■□ 3.27
SLC25A29-216ENST00000556715 SOGA1O94964 1423 aa35.38■■■■□ 3.25
SLC25A29-216ENST00000556715 WDR97A6NE52 1622 aa35.37■■■■□ 3.25
SLC25A29-216ENST00000556715 RAD54L2Q9Y4B4 1467 aa35.36■■■■□ 3.25
SLC25A29-216ENST00000556715 AQRO60306 1485 aaKnown RBP eCLIP35.27■■■■□ 3.242e-6■■■□□ 15.2
SLC25A29-216ENST00000556715 BIVM-ERCC5R4GMW8 1640 aa35.25■■■■□ 3.23
SLC25A29-216ENST00000556715 WRNQ14191 1432 aaPredicted RBP eCLIP35.25■■■■□ 3.23
SLC25A29-216ENST00000556715 TOP2BQ02880 1626 aa35.24■■■■□ 3.23
SLC25A29-216ENST00000556715 SYNJ1O43426 1573 aa35.18■■■■□ 3.22
SLC25A29-216ENST00000556715 TDRD9Q8NDG6 1382 aaKnown RBP35.16■■■■□ 3.22
SLC25A29-216ENST00000556715 ABCA10Q8WWZ4 1543 aa35.16■■■■□ 3.22
SLC25A29-216ENST00000556715 OSCARQ8IYS5 282 aa35.14■■■■□ 3.22
SLC25A29-216ENST00000556715 GRIN2BQ13224 1484 aa35.06■■■■□ 3.2
SLC25A29-216ENST00000556715 ABCA5Q8WWZ7 1642 aa35.06■■■■□ 3.2
SLC25A29-216ENST00000556715 SNAPC4Q5SXM2 1469 aa35.03■■■■□ 3.2
SLC25A29-216ENST00000556715 MAGI1Q96QZ7 1491 aaPredicted RBP35.03■■■■□ 3.2
SLC25A29-216ENST00000556715 CHD1O14646 1710 aa35.01■■■■□ 3.2
SLC25A29-216ENST00000556715 GAPVD1Q14C86 1478 aa35.01■■■■□ 3.19
SLC25A29-216ENST00000556715 PBRM1Q86U86 1689 aa34.98■■■■□ 3.19
SLC25A29-216ENST00000556715 SYNJ2O15056 1496 aa34.86■■■■□ 3.17
SLC25A29-216ENST00000556715 FBLN2P98095 1184 aa34.8■■■■□ 3.16
SLC25A29-216ENST00000556715 ERICH3Q5RHP9 1530 aa34.75■■■■□ 3.15
SLC25A29-216ENST00000556715 ADAMTS12P58397 1594 aa34.74■■■■□ 3.15
SLC25A29-216ENST00000556715 CHMP7Q8WUX9 453 aaPredicted RBP34.74■■■■□ 3.15
SLC25A29-216ENST00000556715 CLASP1Q7Z460 1538 aa34.7■■■■□ 3.14
SLC25A29-216ENST00000556715 RIMBP3CA6NJZ7 1639 aa34.69■■■■□ 3.14
SLC25A29-216ENST00000556715 RIMBP3BA6NNM3 1639 aa34.69■■■■□ 3.14
SLC25A29-216ENST00000556715 RIMBP3Q9UFD9 1639 aa34.69■■■■□ 3.14
SLC25A29-216ENST00000556715 ARHGEF11O15085 1522 aa34.68■■■■□ 3.14
SLC25A29-216ENST00000556715 TRIM41Q8WV44 630 aa34.68■■■■□ 3.14
SLC25A29-216ENST00000556715 FHAD1B1AJZ9 1412 aa34.63■■■■□ 3.13
SLC25A29-216ENST00000556715 GRIN2AQ12879 1464 aa34.61■■■■□ 3.13
SLC25A29-216ENST00000556715 KIF27Q86VH2 1401 aa34.54■■■■□ 3.12
SLC25A29-216ENST00000556715 NUP160Q12769 1436 aa34.48■■■■□ 3.11
SLC25A29-216ENST00000556715 CEP170Q5SW79 1584 aa34.44■■■■□ 3.1
SLC25A29-216ENST00000556715 CUL7Q14999 1698 aa34.41■■■■□ 3.1
SLC25A29-216ENST00000556715 ARAP1Q96P48 1450 aa34.38■■■■□ 3.09
SLC25A29-216ENST00000556715 IGF1RP08069 1367 aa34.35■■■■□ 3.09
SLC25A29-216ENST00000556715 SHROOM2Q13796 1616 aa34.26■■■■□ 3.08
SLC25A29-216ENST00000556715 RUSC2Q8N2Y8 1516 aa34.24■■■■□ 3.07
SLC25A29-216ENST00000556715 CYB5RLQ6IPT4 315 aa34.2■■■■□ 3.07
SLC25A29-216ENST00000556715 CARMIL1Q5VZK9 1371 aa34.16■■■■□ 3.06
SLC25A29-216ENST00000556715 ERCC6L2Q5T890 1561 aa34.1■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms