RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 NISCHQ9Y2I1 1504 aa39.28■■■■□ 3.88
TGFB3-206ENST00000556674 ABCC9O60706 1549 aa35.8■■■■□ 3.32
TGFB3-206ENST00000556674 CCDC180Q9P1Z9 1646 aa35.13■■■■□ 3.21
TGFB3-206ENST00000556674 DNAJC5BQ9UF47 199 aa34.17■■■■□ 3.06
TGFB3-206ENST00000556674 RB1CC1Q8TDY2 1594 aa33.76■■■□□ 2.99
TGFB3-206ENST00000556674 NACADO15069 1562 aa33.36■■■□□ 2.93
TGFB3-206ENST00000556674 PABPN1Q86U42 306 aaKnown RBP eCLIP33.24■■■□□ 2.91
TGFB3-206ENST00000556674 DCAF8L2P0C7V8 631 aa33.1■■■□□ 2.89
TGFB3-206ENST00000556674 UNC13AQ9UPW8 1703 aa33■■■□□ 2.87
TGFB3-206ENST00000556674 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
TGFB3-206ENST00000556674 MYO15BQ96JP2 1530 aa32.79■■■□□ 2.84
TGFB3-206ENST00000556674 ZCCHC6Q5VYS8 1495 aaKnown RBP32.71■■■□□ 2.83
TGFB3-206ENST00000556674 DCAF1Q9Y4B6 1507 aa32.59■■■□□ 2.81
TGFB3-206ENST00000556674 CC2D2AQ9P2K1 1620 aa32.29■■■□□ 2.76
TGFB3-206ENST00000556674 CECR2Q9BXF3 1484 aa32.29■■■□□ 2.76
TGFB3-206ENST00000556674 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
TGFB3-206ENST00000556674 EIF4G1Q04637 1599 aaKnown RBP32.07■■■□□ 2.72
TGFB3-206ENST00000556674 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
TGFB3-206ENST00000556674 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
TGFB3-206ENST00000556674 CUX2O14529 1486 aa31.08■■■□□ 2.57
TGFB3-206ENST00000556674 ERCC6Q03468 1493 aa30.93■■■□□ 2.54
TGFB3-206ENST00000556674 NCAPD3P42695 1498 aa30.82■■■□□ 2.53
TGFB3-206ENST00000556674 ATAD2BQ9ULI0 1458 aa30.65■■■□□ 2.5
TGFB3-206ENST00000556674 NESP48681 1621 aa30.58■■■□□ 2.49
TGFB3-206ENST00000556674 HMGXB3Q12766 1538 aa30.52■■■□□ 2.48
TGFB3-206ENST00000556674 SMARCA2P51531 1590 aa30.5■■■□□ 2.47
TGFB3-206ENST00000556674 BAZ1AQ9NRL2 1556 aaPredicted RBP30.5■■■□□ 2.47
TGFB3-206ENST00000556674 SMARCA4P51532 1647 aa30.5■■■□□ 2.47
TGFB3-206ENST00000556674 THOC2Q8NI27 1593 aaKnown RBP30.38■■■□□ 2.45
TGFB3-206ENST00000556674 BAZ1BQ9UIG0 1483 aaKnown RBP30.31■■■□□ 2.44
TGFB3-206ENST00000556674 PEG3Q9GZU2 1588 aa30.26■■■□□ 2.43
TGFB3-206ENST00000556674 LAMC3Q9Y6N6 1575 aa30.21■■■□□ 2.43
TGFB3-206ENST00000556674 MROH2BQ7Z745 1585 aa30.2■■■□□ 2.43
TGFB3-206ENST00000556674 TRIM41Q8WV44 630 aa30.16■■■□□ 2.42
TGFB3-206ENST00000556674 KIF21AQ7Z4S6 1674 aa30.14■■■□□ 2.42
TGFB3-206ENST00000556674 PDS5BQ9NTI5 1447 aa30.06■■■□□ 2.4
TGFB3-206ENST00000556674 WIZO95785 1651 aa29.88■■■□□ 2.37
TGFB3-206ENST00000556674 MRC2Q9UBG0 1479 aa29.86■■■□□ 2.37
TGFB3-206ENST00000556674 CADPSQ9ULU8 1353 aa29.85■■■□□ 2.37
TGFB3-206ENST00000556674 RSF1Q96T23 1441 aaPredicted RBP29.85■■■□□ 2.37
TGFB3-206ENST00000556674 WDR62O43379 1518 aa29.81■■■□□ 2.36
TGFB3-206ENST00000556674 TOP2AP11388 1531 aaKnown RBP29.63■■■□□ 2.33
TGFB3-206ENST00000556674 CEP164Q9UPV0 1460 aa29.61■■■□□ 2.33
TGFB3-206ENST00000556674 OSCARQ8IYS5 282 aa29.55■■■□□ 2.32
TGFB3-206ENST00000556674 FANCD2Q9BXW9 1451 aa29.53■■■□□ 2.32
TGFB3-206ENST00000556674 CFTRP13569 1480 aa29.39■■■□□ 2.3
TGFB3-206ENST00000556674 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
TGFB3-206ENST00000556674 RIMBP3CA6NJZ7 1639 aa29.26■■■□□ 2.27
TGFB3-206ENST00000556674 RIMBP3BA6NNM3 1639 aa29.26■■■□□ 2.27
TGFB3-206ENST00000556674 RIMBP3Q9UFD9 1639 aa29.26■■■□□ 2.27
TGFB3-206ENST00000556674 CCDC88BA6NC98 1476 aa29.23■■■□□ 2.27
TGFB3-206ENST00000556674 ARHGEF11O15085 1522 aa29.1■■■□□ 2.25
TGFB3-206ENST00000556674 PRDM2Q13029 1718 aa29.09■■■□□ 2.25
TGFB3-206ENST00000556674 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
TGFB3-206ENST00000556674 IFT140Q96RY7 1462 aa29.04■■■□□ 2.24
TGFB3-206ENST00000556674 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
TGFB3-206ENST00000556674 CYB5RLQ6IPT4 315 aa28.93■■■□□ 2.22
TGFB3-206ENST00000556674 TOPBP1Q92547 1522 aa28.9■■■□□ 2.22
TGFB3-206ENST00000556674 EIF4G3O43432 1585 aaKnown RBP28.88■■■□□ 2.21
TGFB3-206ENST00000556674 TRHP20396 242 aaPredicted RBP28.81■■■□□ 2.2
TGFB3-206ENST00000556674 CHD1O14646 1710 aa28.78■■■□□ 2.2
TGFB3-206ENST00000556674 ARAP1Q96P48 1450 aa28.78■■■□□ 2.2
TGFB3-206ENST00000556674 ABCC8Q09428 1581 aa28.75■■■□□ 2.19
TGFB3-206ENST00000556674 AQRO60306 1485 aaKnown RBP eCLIP28.74■■■□□ 2.19
TGFB3-206ENST00000556674 DNMBPQ6XZF7 1577 aa28.72■■■□□ 2.19
TGFB3-206ENST00000556674 TARBP1Q13395 1621 aaKnown RBP28.69■■■□□ 2.18
TGFB3-206ENST00000556674 FBLN2P98095 1184 aa28.67■■■□□ 2.18
TGFB3-206ENST00000556674 POLA1P09884 1462 aaPredicted RBP28.57■■■□□ 2.16
TGFB3-206ENST00000556674 RAD54L2Q9Y4B4 1467 aa28.49■■■□□ 2.15
TGFB3-206ENST00000556674 TDRD9Q8NDG6 1382 aaKnown RBP28.47■■■□□ 2.15
TGFB3-206ENST00000556674 CLASP1Q7Z460 1538 aa28.44■■■□□ 2.14
TGFB3-206ENST00000556674 AEBP2Q6ZN18 517 aaPredicted RBP28.42■■■□□ 2.14
TGFB3-206ENST00000556674 SOGA1O94964 1423 aa28.42■■■□□ 2.14
TGFB3-206ENST00000556674 SNAPC4Q5SXM2 1469 aa28.41■■■□□ 2.14
TGFB3-206ENST00000556674 CUX1P39880 1505 aa28.35■■■□□ 2.13
TGFB3-206ENST00000556674 SYNJ1O43426 1573 aa28.35■■■□□ 2.13
TGFB3-206ENST00000556674 CHMP7Q8WUX9 453 aaPredicted RBP28.34■■■□□ 2.13
TGFB3-206ENST00000556674 WDR97A6NE52 1622 aa28.31■■■□□ 2.12
TGFB3-206ENST00000556674 FGD5Q6ZNL6 1462 aa28.3■■■□□ 2.12
TGFB3-206ENST00000556674 MAGI1Q96QZ7 1491 aaPredicted RBP28.29■■■□□ 2.12
TGFB3-206ENST00000556674 GRIN2BQ13224 1484 aa28.24■■■□□ 2.11
TGFB3-206ENST00000556674 SYNJ2O15056 1496 aa28.22■■■□□ 2.11
TGFB3-206ENST00000556674 WRNQ14191 1432 aaPredicted RBP eCLIP28.19■■■□□ 2.1
TGFB3-206ENST00000556674 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
TGFB3-206ENST00000556674 TOP2BQ02880 1626 aa28.15■■■□□ 2.1
TGFB3-206ENST00000556674 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
TGFB3-206ENST00000556674 PBRM1Q86U86 1689 aa28.09■■■□□ 2.09
TGFB3-206ENST00000556674 ABCA10Q8WWZ4 1543 aa28.07■■■□□ 2.08
TGFB3-206ENST00000556674 ERCC6L2Q5T890 1561 aa27.99■■■□□ 2.07
TGFB3-206ENST00000556674 ABCA5Q8WWZ7 1642 aa27.96■■■□□ 2.07
TGFB3-206ENST00000556674 GRIN2AQ12879 1464 aa27.89■■■□□ 2.05
TGFB3-206ENST00000556674 CEP170Q5SW79 1584 aa27.86■■■□□ 2.05
TGFB3-206ENST00000556674 NUP160Q12769 1436 aa27.81■■■□□ 2.04
TGFB3-206ENST00000556674 ADAMTS12P58397 1594 aa27.79■■■□□ 2.04
TGFB3-206ENST00000556674 SHROOM2Q13796 1616 aa27.76■■■□□ 2.03
TGFB3-206ENST00000556674 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
TGFB3-206ENST00000556674 KIF13AQ9H1H9 1805 aa27.74■■■□□ 2.03
TGFB3-206ENST00000556674 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
TGFB3-206ENST00000556674 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
TGFB3-206ENST00000556674 PRG4Q92954 1404 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms