RNA–Protein interactions for RNA: ENST00000556672.1

NEMF-210, Transcript of nuclear export mediator factor, humanhuman

TSL 2 BASIC

Gene NEMF, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-210ENST00000556672 NISCHQ9Y2I1 1504 aa31.02■■■□□ 2.56
NEMF-210ENST00000556672 ABCC9O60706 1549 aa27.85■■■□□ 2.05
NEMF-210ENST00000556672 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
NEMF-210ENST00000556672 RB1CC1Q8TDY2 1594 aa26.41■■□□□ 1.82
NEMF-210ENST00000556672 DNAJC5BQ9UF47 199 aa26.33■■□□□ 1.81
NEMF-210ENST00000556672 NACADO15069 1562 aa26.27■■□□□ 1.8
NEMF-210ENST00000556672 DCAF8L2P0C7V8 631 aa26.04■■□□□ 1.76
NEMF-210ENST00000556672 MYO15BQ96JP2 1530 aa25.96■■□□□ 1.75
NEMF-210ENST00000556672 PABPN1Q86U42 306 aaKnown RBP eCLIP25.95■■□□□ 1.74
NEMF-210ENST00000556672 UNC13AQ9UPW8 1703 aa25.91■■□□□ 1.74
NEMF-210ENST00000556672 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
NEMF-210ENST00000556672 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
NEMF-210ENST00000556672 DCAF1Q9Y4B6 1507 aa25.62■■□□□ 1.69
NEMF-210ENST00000556672 SHROOM4Q9ULL8 1493 aa25.33■■□□□ 1.65
NEMF-210ENST00000556672 SCRIBQ14160 1630 aa25.32■■□□□ 1.64
NEMF-210ENST00000556672 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
NEMF-210ENST00000556672 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
NEMF-210ENST00000556672 CECR2Q9BXF3 1484 aa25.08■■□□□ 1.6
NEMF-210ENST00000556672 NCAPD3P42695 1498 aa24.32■■□□□ 1.48
NEMF-210ENST00000556672 ATAD2BQ9ULI0 1458 aa24.26■■□□□ 1.47
NEMF-210ENST00000556672 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
NEMF-210ENST00000556672 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
NEMF-210ENST00000556672 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
NEMF-210ENST00000556672 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
NEMF-210ENST00000556672 BAZ1AQ9NRL2 1556 aaPredicted RBP24■■□□□ 1.43
NEMF-210ENST00000556672 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
NEMF-210ENST00000556672 NESP48681 1621 aa23.98■■□□□ 1.43
NEMF-210ENST00000556672 CUX2O14529 1486 aa23.97■■□□□ 1.43
NEMF-210ENST00000556672 MROH2BQ7Z745 1585 aa23.95■■□□□ 1.42
NEMF-210ENST00000556672 ERCC6Q03468 1493 aa23.93■■□□□ 1.42
NEMF-210ENST00000556672 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
NEMF-210ENST00000556672 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
NEMF-210ENST00000556672 LAMC3Q9Y6N6 1575 aa23.69■■□□□ 1.38
NEMF-210ENST00000556672 WIZO95785 1651 aa23.6■■□□□ 1.37
NEMF-210ENST00000556672 KIF21AQ7Z4S6 1674 aa23.59■■□□□ 1.37
NEMF-210ENST00000556672 CADPSQ9ULU8 1353 aa23.55■■□□□ 1.36
NEMF-210ENST00000556672 PDS5BQ9NTI5 1447 aa23.53■■□□□ 1.36
NEMF-210ENST00000556672 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
NEMF-210ENST00000556672 MRC2Q9UBG0 1479 aa23.38■■□□□ 1.33
NEMF-210ENST00000556672 WDR62O43379 1518 aa23.37■■□□□ 1.33
NEMF-210ENST00000556672 CFTRP13569 1480 aa23.31■■□□□ 1.32
NEMF-210ENST00000556672 TOP2AP11388 1531 aaKnown RBP23.28■■□□□ 1.32
NEMF-210ENST00000556672 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
NEMF-210ENST00000556672 CEP164Q9UPV0 1460 aa23.25■■□□□ 1.31
NEMF-210ENST00000556672 URB2Q14146 1524 aaKnown RBP23.15■■□□□ 1.3
NEMF-210ENST00000556672 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
NEMF-210ENST00000556672 PRDM2Q13029 1718 aa22.94■■□□□ 1.26
NEMF-210ENST00000556672 TRIM41Q8WV44 630 aa22.88■■□□□ 1.25
NEMF-210ENST00000556672 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
NEMF-210ENST00000556672 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
NEMF-210ENST00000556672 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
NEMF-210ENST00000556672 IFT140Q96RY7 1462 aa22.81■■□□□ 1.24
NEMF-210ENST00000556672 DNMBPQ6XZF7 1577 aa22.72■■□□□ 1.23
NEMF-210ENST00000556672 ABCC8Q09428 1581 aa22.69■■□□□ 1.22
NEMF-210ENST00000556672 TARBP1Q13395 1621 aaKnown RBP22.68■■□□□ 1.22
NEMF-210ENST00000556672 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
NEMF-210ENST00000556672 AQRO60306 1485 aaKnown RBP eCLIP22.63■■□□□ 1.217e-6■■□□□ 12.2
NEMF-210ENST00000556672 POLA1P09884 1462 aaPredicted RBP22.63■■□□□ 1.21
NEMF-210ENST00000556672 RIMBP3CA6NJZ7 1639 aa22.61■■□□□ 1.21
NEMF-210ENST00000556672 RIMBP3BA6NNM3 1639 aa22.61■■□□□ 1.21
NEMF-210ENST00000556672 RIMBP3Q9UFD9 1639 aa22.61■■□□□ 1.21
NEMF-210ENST00000556672 RAD54L2Q9Y4B4 1467 aa22.56■■□□□ 1.2
NEMF-210ENST00000556672 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
NEMF-210ENST00000556672 CUX1P39880 1505 aa22.48■■□□□ 1.19
NEMF-210ENST00000556672 CHD1O14646 1710 aa22.48■■□□□ 1.19
NEMF-210ENST00000556672 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
NEMF-210ENST00000556672 SOGA1O94964 1423 aa22.47■■□□□ 1.19
NEMF-210ENST00000556672 FGD5Q6ZNL6 1462 aa22.46■■□□□ 1.19
NEMF-210ENST00000556672 SNAPC4Q5SXM2 1469 aa22.36■■□□□ 1.17
NEMF-210ENST00000556672 ARAP1Q96P48 1450 aa22.36■■□□□ 1.17
NEMF-210ENST00000556672 FBLN2P98095 1184 aa22.34■■□□□ 1.17
NEMF-210ENST00000556672 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
NEMF-210ENST00000556672 WDR97A6NE52 1622 aa22.33■■□□□ 1.17
NEMF-210ENST00000556672 CLASP1Q7Z460 1538 aa22.3■■□□□ 1.16
NEMF-210ENST00000556672 MAGI1Q96QZ7 1491 aaPredicted RBP22.28■■□□□ 1.16
NEMF-210ENST00000556672 GRIN2BQ13224 1484 aa22.27■■□□□ 1.16
NEMF-210ENST00000556672 SUPT5HO00267 1087 aaKnown RBP22.24■■□□□ 1.15
NEMF-210ENST00000556672 ABCA10Q8WWZ4 1543 aa22.21■■□□□ 1.15
NEMF-210ENST00000556672 SYNJ2O15056 1496 aa22.21■■□□□ 1.15
NEMF-210ENST00000556672 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.14
NEMF-210ENST00000556672 GAPVD1Q14C86 1478 aa22.2■■□□□ 1.14
NEMF-210ENST00000556672 ABCA5Q8WWZ7 1642 aa22.18■■□□□ 1.14
NEMF-210ENST00000556672 AEBP2Q6ZN18 517 aaPredicted RBP22.16■■□□□ 1.14
NEMF-210ENST00000556672 SYNJ1O43426 1573 aa22.16■■□□□ 1.14
NEMF-210ENST00000556672 PBRM1Q86U86 1689 aa22.15■■□□□ 1.14
NEMF-210ENST00000556672 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
NEMF-210ENST00000556672 TOP2BQ02880 1626 aa22.05■■□□□ 1.12
NEMF-210ENST00000556672 WRNQ14191 1432 aaPredicted RBP eCLIP22.05■■□□□ 1.12
NEMF-210ENST00000556672 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
NEMF-210ENST00000556672 ERCC6L2Q5T890 1561 aa22■■□□□ 1.11
NEMF-210ENST00000556672 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
NEMF-210ENST00000556672 ADAMTS12P58397 1594 aa21.99■■□□□ 1.11
NEMF-210ENST00000556672 NUP160Q12769 1436 aa21.99■■□□□ 1.11
NEMF-210ENST00000556672 CEP170Q5SW79 1584 aa21.97■■□□□ 1.11
NEMF-210ENST00000556672 FHAD1B1AJZ9 1412 aa21.92■■□□□ 1.1
NEMF-210ENST00000556672 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.09
NEMF-210ENST00000556672 SHROOM2Q13796 1616 aa21.88■■□□□ 1.09
NEMF-210ENST00000556672 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
NEMF-210ENST00000556672 JPH4Q96JJ6 628 aa21.71■■□□□ 1.07
NEMF-210ENST00000556672 RUSC2Q8N2Y8 1516 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms