RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
GABRB3-211ENST00000556636 CCDC180Q9P1Z9 1646 aa23.13■■□□□ 1.29
GABRB3-211ENST00000556636 ABCC9O60706 1549 aa22.82■■□□□ 1.24
GABRB3-211ENST00000556636 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
GABRB3-211ENST00000556636 NACADO15069 1562 aa21.84■■□□□ 1.09
GABRB3-211ENST00000556636 RB1CC1Q8TDY2 1594 aa21.84■■□□□ 1.09
GABRB3-211ENST00000556636 ZCCHC6Q5VYS8 1495 aaKnown RBP21.75■■□□□ 1.07
GABRB3-211ENST00000556636 MYO15BQ96JP2 1530 aa21.73■■□□□ 1.07
GABRB3-211ENST00000556636 DCAF1Q9Y4B6 1507 aa21.61■■□□□ 1.05
GABRB3-211ENST00000556636 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
GABRB3-211ENST00000556636 UNC13AQ9UPW8 1703 aa21.3■■□□□ 1
GABRB3-211ENST00000556636 BICRAQ9NZM4 1560 aa21.27■□□□□ 0.99
GABRB3-211ENST00000556636 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
GABRB3-211ENST00000556636 SCRIBQ14160 1630 aa21.15■□□□□ 0.98
GABRB3-211ENST00000556636 SHROOM4Q9ULL8 1493 aa20.96■□□□□ 0.95
GABRB3-211ENST00000556636 EIF4G1Q04637 1599 aaKnown RBP20.67■□□□□ 0.9
GABRB3-211ENST00000556636 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
GABRB3-211ENST00000556636 CECR2Q9BXF3 1484 aa20.5■□□□□ 0.87
GABRB3-211ENST00000556636 NCAPD3P42695 1498 aa20.24■□□□□ 0.83
GABRB3-211ENST00000556636 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
GABRB3-211ENST00000556636 ATAD2BQ9ULI0 1458 aa20.23■□□□□ 0.83
GABRB3-211ENST00000556636 BAZ1AQ9NRL2 1556 aaPredicted RBP20.21■□□□□ 0.83
GABRB3-211ENST00000556636 MROH2BQ7Z745 1585 aa20.17■□□□□ 0.82
GABRB3-211ENST00000556636 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
GABRB3-211ENST00000556636 PEG3Q9GZU2 1588 aa20.07■□□□□ 0.8
GABRB3-211ENST00000556636 HMGXB3Q12766 1538 aa20.04■□□□□ 0.8
GABRB3-211ENST00000556636 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
GABRB3-211ENST00000556636 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
GABRB3-211ENST00000556636 WIZO95785 1651 aa19.89■□□□□ 0.77
GABRB3-211ENST00000556636 NESP48681 1621 aa19.75■□□□□ 0.75
GABRB3-211ENST00000556636 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
GABRB3-211ENST00000556636 CADPSQ9ULU8 1353 aa19.65■□□□□ 0.74
GABRB3-211ENST00000556636 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
GABRB3-211ENST00000556636 ERCC6Q03468 1493 aa19.6■□□□□ 0.73
GABRB3-211ENST00000556636 PDS5BQ9NTI5 1447 aa19.53■□□□□ 0.72
GABRB3-211ENST00000556636 CCDC88BA6NC98 1476 aa19.52■□□□□ 0.72
GABRB3-211ENST00000556636 CFTRP13569 1480 aa19.5■□□□□ 0.71
GABRB3-211ENST00000556636 CUX2O14529 1486 aa19.44■□□□□ 0.7
GABRB3-211ENST00000556636 SUPT5HO00267 1087 aaKnown RBP19.42■□□□□ 0.7
GABRB3-211ENST00000556636 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
GABRB3-211ENST00000556636 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
GABRB3-211ENST00000556636 FANCD2Q9BXW9 1451 aa19.37■□□□□ 0.69
GABRB3-211ENST00000556636 CEP164Q9UPV0 1460 aa19.32■□□□□ 0.68
GABRB3-211ENST00000556636 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
GABRB3-211ENST00000556636 WDR62O43379 1518 aa19.25■□□□□ 0.67
GABRB3-211ENST00000556636 URB2Q14146 1524 aaKnown RBP19.2■□□□□ 0.66
GABRB3-211ENST00000556636 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
GABRB3-211ENST00000556636 TOPBP1Q92547 1522 aa19.06■□□□□ 0.64
GABRB3-211ENST00000556636 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
GABRB3-211ENST00000556636 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
GABRB3-211ENST00000556636 DNMBPQ6XZF7 1577 aa18.98■□□□□ 0.63
GABRB3-211ENST00000556636 IFT140Q96RY7 1462 aa18.94■□□□□ 0.62
GABRB3-211ENST00000556636 CUX1P39880 1505 aa18.9■□□□□ 0.62
GABRB3-211ENST00000556636 ZNF608Q9ULD9 1512 aaPredicted RBP18.9■□□□□ 0.62
GABRB3-211ENST00000556636 POLA1P09884 1462 aaPredicted RBP18.9■□□□□ 0.62
GABRB3-211ENST00000556636 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
GABRB3-211ENST00000556636 SOGA1O94964 1423 aa18.85■□□□□ 0.61
GABRB3-211ENST00000556636 FGD5Q6ZNL6 1462 aa18.84■□□□□ 0.61
GABRB3-211ENST00000556636 TARBP1Q13395 1621 aaKnown RBP18.83■□□□□ 0.61
GABRB3-211ENST00000556636 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.6
GABRB3-211ENST00000556636 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
GABRB3-211ENST00000556636 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
GABRB3-211ENST00000556636 OSCARQ8IYS5 282 aa18.72■□□□□ 0.59
GABRB3-211ENST00000556636 EIF4G3O43432 1585 aaKnown RBP18.71■□□□□ 0.59
GABRB3-211ENST00000556636 SYNJ1O43426 1573 aa18.68■□□□□ 0.58
GABRB3-211ENST00000556636 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
GABRB3-211ENST00000556636 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
GABRB3-211ENST00000556636 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
GABRB3-211ENST00000556636 WDR97A6NE52 1622 aa18.61■□□□□ 0.57
GABRB3-211ENST00000556636 GAPVD1Q14C86 1478 aa18.6■□□□□ 0.57
GABRB3-211ENST00000556636 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
GABRB3-211ENST00000556636 FBLN2P98095 1184 aa18.58■□□□□ 0.56
GABRB3-211ENST00000556636 SNAPC4Q5SXM2 1469 aa18.57■□□□□ 0.56
GABRB3-211ENST00000556636 ABCA5Q8WWZ7 1642 aa18.53■□□□□ 0.56
GABRB3-211ENST00000556636 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.56
GABRB3-211ENST00000556636 CHMP7Q8WUX9 453 aaPredicted RBP18.52■□□□□ 0.56
GABRB3-211ENST00000556636 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
GABRB3-211ENST00000556636 CHD1O14646 1710 aa18.45■□□□□ 0.54
GABRB3-211ENST00000556636 PBRM1Q86U86 1689 aa18.43■□□□□ 0.54
GABRB3-211ENST00000556636 ERICH3Q5RHP9 1530 aa18.4■□□□□ 0.54
GABRB3-211ENST00000556636 IGF1RP08069 1367 aa18.4■□□□□ 0.54
GABRB3-211ENST00000556636 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
GABRB3-211ENST00000556636 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
GABRB3-211ENST00000556636 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
GABRB3-211ENST00000556636 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
GABRB3-211ENST00000556636 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
GABRB3-211ENST00000556636 ARHGEF11O15085 1522 aa18.33■□□□□ 0.53
GABRB3-211ENST00000556636 TRIM41Q8WV44 630 aa18.33■□□□□ 0.52
GABRB3-211ENST00000556636 NUP160Q12769 1436 aa18.31■□□□□ 0.52
GABRB3-211ENST00000556636 RIMBP3CA6NJZ7 1639 aa18.31■□□□□ 0.52
GABRB3-211ENST00000556636 RIMBP3BA6NNM3 1639 aa18.31■□□□□ 0.52
GABRB3-211ENST00000556636 RIMBP3Q9UFD9 1639 aa18.31■□□□□ 0.52
GABRB3-211ENST00000556636 CYB5RLQ6IPT4 315 aa18.26■□□□□ 0.51
GABRB3-211ENST00000556636 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
GABRB3-211ENST00000556636 CEP170Q5SW79 1584 aa18.25■□□□□ 0.51
GABRB3-211ENST00000556636 CARMIL1Q5VZK9 1371 aa18.24■□□□□ 0.51
GABRB3-211ENST00000556636 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
GABRB3-211ENST00000556636 JPH4Q96JJ6 628 aa18.19■□□□□ 0.5
GABRB3-211ENST00000556636 CUL7Q14999 1698 aa18.15■□□□□ 0.5
GABRB3-211ENST00000556636 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
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