RNA–Protein interactions for RNA: ENST00000556585.2

TMEM253-206, Transcript of transmembrane protein 253, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TMEM253, Length 1,236 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-206ENST00000556585 NISCHQ9Y2I1 1504 aa30.29■■■□□ 2.44
TMEM253-206ENST00000556585 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
TMEM253-206ENST00000556585 ABCC9O60706 1549 aa26.81■■□□□ 1.88
TMEM253-206ENST00000556585 RB1CC1Q8TDY2 1594 aa25.6■■□□□ 1.69
TMEM253-206ENST00000556585 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
TMEM253-206ENST00000556585 NACADO15069 1562 aa25.46■■□□□ 1.67
TMEM253-206ENST00000556585 UNC13AQ9UPW8 1703 aa25.21■■□□□ 1.63
TMEM253-206ENST00000556585 ZCCHC6Q5VYS8 1495 aaKnown RBP25.18■■□□□ 1.62
TMEM253-206ENST00000556585 MYO15BQ96JP2 1530 aa25.14■■□□□ 1.62
TMEM253-206ENST00000556585 PABPN1Q86U42 306 aaKnown RBP eCLIP24.99■■□□□ 1.59
TMEM253-206ENST00000556585 DCAF1Q9Y4B6 1507 aa24.96■■□□□ 1.59
TMEM253-206ENST00000556585 BICRAQ9NZM4 1560 aa24.89■■□□□ 1.58
TMEM253-206ENST00000556585 DNAJC5BQ9UF47 199 aa24.83■■□□□ 1.57
TMEM253-206ENST00000556585 SCRIBQ14160 1630 aa24.79■■□□□ 1.56
TMEM253-206ENST00000556585 SHROOM4Q9ULL8 1493 aa24.43■■□□□ 1.5
TMEM253-206ENST00000556585 CC2D2AQ9P2K1 1620 aa24.24■■□□□ 1.47
TMEM253-206ENST00000556585 EIF4G1Q04637 1599 aaKnown RBP24.24■■□□□ 1.47
TMEM253-206ENST00000556585 CECR2Q9BXF3 1484 aa24.07■■□□□ 1.44
TMEM253-206ENST00000556585 SMARCA4P51532 1647 aa23.62■■□□□ 1.37
TMEM253-206ENST00000556585 ATAD2BQ9ULI0 1458 aa23.49■■□□□ 1.35
TMEM253-206ENST00000556585 BAZ1AQ9NRL2 1556 aaPredicted RBP23.48■■□□□ 1.35
TMEM253-206ENST00000556585 NCAPD3P42695 1498 aa23.47■■□□□ 1.35
TMEM253-206ENST00000556585 SMARCA2P51531 1590 aa23.44■■□□□ 1.34
TMEM253-206ENST00000556585 MROH2BQ7Z745 1585 aa23.4■■□□□ 1.34
TMEM253-206ENST00000556585 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
TMEM253-206ENST00000556585 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
TMEM253-206ENST00000556585 BAZ1BQ9UIG0 1483 aaKnown RBP23.3■■□□□ 1.32
TMEM253-206ENST00000556585 WIZO95785 1651 aa23.2■■□□□ 1.3
TMEM253-206ENST00000556585 NESP48681 1621 aa23.14■■□□□ 1.29
TMEM253-206ENST00000556585 ERCC6Q03468 1493 aa23.09■■□□□ 1.29
TMEM253-206ENST00000556585 RSF1Q96T23 1441 aaPredicted RBP22.97■■□□□ 1.27
TMEM253-206ENST00000556585 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
TMEM253-206ENST00000556585 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
TMEM253-206ENST00000556585 CUX2O14529 1486 aa22.87■■□□□ 1.25
TMEM253-206ENST00000556585 THOC2Q8NI27 1593 aaKnown RBP22.84■■□□□ 1.25
TMEM253-206ENST00000556585 TOP2AP11388 1531 aaKnown RBP22.83■■□□□ 1.25
TMEM253-206ENST00000556585 CADPSQ9ULU8 1353 aa22.78■■□□□ 1.24
TMEM253-206ENST00000556585 PDS5BQ9NTI5 1447 aa22.75■■□□□ 1.23
TMEM253-206ENST00000556585 CFTRP13569 1480 aa22.6■■□□□ 1.21
TMEM253-206ENST00000556585 MRC2Q9UBG0 1479 aa22.6■■□□□ 1.21
TMEM253-206ENST00000556585 PRDM2Q13029 1718 aa22.59■■□□□ 1.21
TMEM253-206ENST00000556585 FANCD2Q9BXW9 1451 aa22.58■■□□□ 1.2
TMEM253-206ENST00000556585 CEP164Q9UPV0 1460 aa22.58■■□□□ 1.2
TMEM253-206ENST00000556585 CCDC88BA6NC98 1476 aa22.57■■□□□ 1.2
TMEM253-206ENST00000556585 WDR62O43379 1518 aa22.54■■□□□ 1.2
TMEM253-206ENST00000556585 DNAJC5Q9H3Z4 198 aa22.48■■□□□ 1.19
TMEM253-206ENST00000556585 URB2Q14146 1524 aaKnown RBP22.41■■□□□ 1.18
TMEM253-206ENST00000556585 SUPT5HO00267 1087 aaKnown RBP22.25■■□□□ 1.15
TMEM253-206ENST00000556585 TOPBP1Q92547 1522 aa22.2■■□□□ 1.14
TMEM253-206ENST00000556585 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
TMEM253-206ENST00000556585 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
TMEM253-206ENST00000556585 IFT140Q96RY7 1462 aa22.08■■□□□ 1.12
TMEM253-206ENST00000556585 ABCC8Q09428 1581 aa22.08■■□□□ 1.12
TMEM253-206ENST00000556585 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
TMEM253-206ENST00000556585 TARBP1Q13395 1621 aaKnown RBP22.01■■□□□ 1.11
TMEM253-206ENST00000556585 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
TMEM253-206ENST00000556585 CUX1P39880 1505 aa21.96■■□□□ 1.11
TMEM253-206ENST00000556585 RAD54L2Q9Y4B4 1467 aa21.95■■□□□ 1.1
TMEM253-206ENST00000556585 FGD5Q6ZNL6 1462 aa21.92■■□□□ 1.1
TMEM253-206ENST00000556585 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.1
TMEM253-206ENST00000556585 CHD1O14646 1710 aa21.86■■□□□ 1.09
TMEM253-206ENST00000556585 OSCARQ8IYS5 282 aa21.86■■□□□ 1.09
TMEM253-206ENST00000556585 SOGA1O94964 1423 aa21.86■■□□□ 1.09
TMEM253-206ENST00000556585 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
TMEM253-206ENST00000556585 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
TMEM253-206ENST00000556585 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
TMEM253-206ENST00000556585 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
TMEM253-206ENST00000556585 SYNJ1O43426 1573 aa21.72■■□□□ 1.07
TMEM253-206ENST00000556585 BIVM-ERCC5R4GMW8 1640 aa21.72■■□□□ 1.07
TMEM253-206ENST00000556585 SNAPC4Q5SXM2 1469 aa21.71■■□□□ 1.07
TMEM253-206ENST00000556585 FBLN2P98095 1184 aa21.7■■□□□ 1.06
TMEM253-206ENST00000556585 RIMBP3CA6NJZ7 1639 aa21.69■■□□□ 1.06
TMEM253-206ENST00000556585 RIMBP3BA6NNM3 1639 aa21.69■■□□□ 1.06
TMEM253-206ENST00000556585 RIMBP3Q9UFD9 1639 aa21.69■■□□□ 1.06
TMEM253-206ENST00000556585 TOP2BQ02880 1626 aa21.68■■□□□ 1.06
TMEM253-206ENST00000556585 WRNQ14191 1432 aaPredicted RBP eCLIP21.66■■□□□ 1.06
TMEM253-206ENST00000556585 ABCA5Q8WWZ7 1642 aa21.65■■□□□ 1.06
TMEM253-206ENST00000556585 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
TMEM253-206ENST00000556585 GRIN2BQ13224 1484 aa21.64■■□□□ 1.05
TMEM253-206ENST00000556585 GAPVD1Q14C86 1478 aa21.62■■□□□ 1.05
TMEM253-206ENST00000556585 ARHGEF11O15085 1522 aa21.6■■□□□ 1.05
TMEM253-206ENST00000556585 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
TMEM253-206ENST00000556585 SYNJ2O15056 1496 aa21.53■■□□□ 1.04
TMEM253-206ENST00000556585 CHMP7Q8WUX9 453 aaPredicted RBP21.53■■□□□ 1.04
TMEM253-206ENST00000556585 CLASP1Q7Z460 1538 aa21.5■■□□□ 1.03
TMEM253-206ENST00000556585 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
TMEM253-206ENST00000556585 ARAP1Q96P48 1450 aa21.41■■□□□ 1.02
TMEM253-206ENST00000556585 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
TMEM253-206ENST00000556585 GRIN2AQ12879 1464 aa21.39■■□□□ 1.01
TMEM253-206ENST00000556585 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
TMEM253-206ENST00000556585 CEP170Q5SW79 1584 aa21.36■■□□□ 1.01
TMEM253-206ENST00000556585 FHAD1B1AJZ9 1412 aa21.32■■□□□ 1
TMEM253-206ENST00000556585 NUP160Q12769 1436 aa21.27■■□□□ 1
TMEM253-206ENST00000556585 ERCC6L2Q5T890 1561 aa21.27■□□□□ 0.99
TMEM253-206ENST00000556585 SHROOM2Q13796 1616 aa21.2■□□□□ 0.98
TMEM253-206ENST00000556585 KIF27Q86VH2 1401 aa21.2■□□□□ 0.98
TMEM253-206ENST00000556585 CUL7Q14999 1698 aa21.18■□□□□ 0.98
TMEM253-206ENST00000556585 RUSC2Q8N2Y8 1516 aa21.16■□□□□ 0.98
TMEM253-206ENST00000556585 IGF1RP08069 1367 aa21.14■□□□□ 0.98
TMEM253-206ENST00000556585 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms