RNA–Protein interactions for RNA: ENST00000556478.2

ATL1-209, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 644 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-209ENST00000556478 NISCHQ9Y2I1 1504 aa50.32■■■■■ 5.65
ATL1-209ENST00000556478 CCDC180Q9P1Z9 1646 aa45.07■■■■■ 4.81
ATL1-209ENST00000556478 ABCC9O60706 1549 aa44.78■■■■■ 4.76
ATL1-209ENST00000556478 RB1CC1Q8TDY2 1594 aa42.7■■■■■ 4.43
ATL1-209ENST00000556478 DCAF8L2P0C7V8 631 aa42.52■■■■■ 4.4
ATL1-209ENST00000556478 NACADO15069 1562 aa42.44■■■■■ 4.39
ATL1-209ENST00000556478 UNC13AQ9UPW8 1703 aa41.99■■■■■ 4.31
ATL1-209ENST00000556478 MYO15BQ96JP2 1530 aa41.84■■■■■ 4.29
ATL1-209ENST00000556478 ZCCHC6Q5VYS8 1495 aaKnown RBP41.76■■■■■ 4.28
ATL1-209ENST00000556478 PABPN1Q86U42 306 aaKnown RBP eCLIP41.75■■■■■ 4.27
ATL1-209ENST00000556478 DNAJC5BQ9UF47 199 aa41.65■■■■■ 4.26
ATL1-209ENST00000556478 DCAF1Q9Y4B6 1507 aa41.49■■■■■ 4.23
ATL1-209ENST00000556478 BICRAQ9NZM4 1560 aa41.47■■■■■ 4.23
ATL1-209ENST00000556478 SCRIBQ14160 1630 aa41.2■■■■■ 4.19
ATL1-209ENST00000556478 SHROOM4Q9ULL8 1493 aa40.73■■■■■ 4.11
ATL1-209ENST00000556478 CC2D2AQ9P2K1 1620 aa40.47■■■■■ 4.07
ATL1-209ENST00000556478 EIF4G1Q04637 1599 aaKnown RBP40.41■■■■■ 4.06
ATL1-209ENST00000556478 CECR2Q9BXF3 1484 aa40.22■■■■■ 4.03
ATL1-209ENST00000556478 SMARCA4P51532 1647 aa39.25■■■■□ 3.87
ATL1-209ENST00000556478 NCAPD3P42695 1498 aa39.12■■■■□ 3.85
ATL1-209ENST00000556478 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
ATL1-209ENST00000556478 SMARCA2P51531 1590 aa39.04■■■■□ 3.84
ATL1-209ENST00000556478 BAZ1AQ9NRL2 1556 aaPredicted RBP39.04■■■■□ 3.84
ATL1-209ENST00000556478 HMGXB3Q12766 1538 aa38.91■■■■□ 3.82
ATL1-209ENST00000556478 MROH2BQ7Z745 1585 aa38.84■■■■□ 3.81
ATL1-209ENST00000556478 BAZ1BQ9UIG0 1483 aaKnown RBP38.81■■■■□ 3.8
ATL1-209ENST00000556478 PEG3Q9GZU2 1588 aa38.75■■■■□ 3.79
ATL1-209ENST00000556478 ERCC6Q03468 1493 aa38.61■■■■□ 3.77
ATL1-209ENST00000556478 NESP48681 1621 aa38.58■■■■□ 3.77
ATL1-209ENST00000556478 WIZO95785 1651 aa38.51■■■■□ 3.76
ATL1-209ENST00000556478 CUX2O14529 1486 aa38.3■■■■□ 3.72
ATL1-209ENST00000556478 LAMC3Q9Y6N6 1575 aa38.27■■■■□ 3.72
ATL1-209ENST00000556478 KIF21AQ7Z4S6 1674 aa38.2■■■■□ 3.71
ATL1-209ENST00000556478 RSF1Q96T23 1441 aaPredicted RBP38.1■■■■□ 3.69
ATL1-209ENST00000556478 THOC2Q8NI27 1593 aaKnown RBP38.08■■■■□ 3.69
ATL1-209ENST00000556478 PDS5BQ9NTI5 1447 aa38■■■■□ 3.67
ATL1-209ENST00000556478 CADPSQ9ULU8 1353 aa37.98■■■■□ 3.67
ATL1-209ENST00000556478 DNAJC5Q9H3Z4 198 aa37.9■■■■□ 3.66
ATL1-209ENST00000556478 TOP2AP11388 1531 aaKnown RBP37.9■■■■□ 3.66
ATL1-209ENST00000556478 MRC2Q9UBG0 1479 aa37.68■■■■□ 3.62
ATL1-209ENST00000556478 CEP164Q9UPV0 1460 aa37.63■■■■□ 3.61
ATL1-209ENST00000556478 CFTRP13569 1480 aa37.62■■■■□ 3.61
ATL1-209ENST00000556478 FANCD2Q9BXW9 1451 aa37.61■■■■□ 3.61
ATL1-209ENST00000556478 WDR62O43379 1518 aa37.57■■■■□ 3.61
ATL1-209ENST00000556478 PRDM2Q13029 1718 aa37.54■■■■□ 3.6
ATL1-209ENST00000556478 CCDC88BA6NC98 1476 aa37.49■■■■□ 3.59
ATL1-209ENST00000556478 URB2Q14146 1524 aaKnown RBP37.31■■■■□ 3.56
ATL1-209ENST00000556478 TOPBP1Q92547 1522 aa36.95■■■■□ 3.51
ATL1-209ENST00000556478 SUPT5HO00267 1087 aaKnown RBP36.86■■■■□ 3.49
ATL1-209ENST00000556478 DNMBPQ6XZF7 1577 aa36.86■■■■□ 3.49
ATL1-209ENST00000556478 ABCC8Q09428 1581 aa36.82■■■■□ 3.48
ATL1-209ENST00000556478 IFT140Q96RY7 1462 aa36.82■■■■□ 3.48
ATL1-209ENST00000556478 ZNF608Q9ULD9 1512 aaPredicted RBP36.81■■■■□ 3.48
ATL1-209ENST00000556478 EIF4G3O43432 1585 aaKnown RBP36.66■■■■□ 3.46
ATL1-209ENST00000556478 OSCARQ8IYS5 282 aa36.66■■■■□ 3.46
ATL1-209ENST00000556478 TARBP1Q13395 1621 aaKnown RBP36.63■■■■□ 3.45
ATL1-209ENST00000556478 POLA1P09884 1462 aaPredicted RBP36.58■■■■□ 3.45
ATL1-209ENST00000556478 TRIM41Q8WV44 630 aa36.57■■■■□ 3.44
ATL1-209ENST00000556478 AQRO60306 1485 aaKnown RBP eCLIP36.52■■■■□ 3.44
ATL1-209ENST00000556478 RAD54L2Q9Y4B4 1467 aa36.51■■■■□ 3.44
ATL1-209ENST00000556478 CUX1P39880 1505 aa36.47■■■■□ 3.43
ATL1-209ENST00000556478 CHD1O14646 1710 aa36.45■■■■□ 3.43
ATL1-209ENST00000556478 FGD5Q6ZNL6 1462 aa36.44■■■■□ 3.42
ATL1-209ENST00000556478 SOGA1O94964 1423 aa36.43■■■■□ 3.42
ATL1-209ENST00000556478 TDRD9Q8NDG6 1382 aaKnown RBP36.35■■■■□ 3.41
ATL1-209ENST00000556478 FBLN2P98095 1184 aa36.28■■■■□ 3.4
ATL1-209ENST00000556478 RIMBP3CA6NJZ7 1639 aa36.26■■■■□ 3.4
ATL1-209ENST00000556478 RIMBP3BA6NNM3 1639 aa36.26■■■■□ 3.4
ATL1-209ENST00000556478 RIMBP3Q9UFD9 1639 aa36.26■■■■□ 3.4
ATL1-209ENST00000556478 WDR97A6NE52 1622 aa36.23■■■■□ 3.39
ATL1-209ENST00000556478 SNAPC4Q5SXM2 1469 aa36.15■■■■□ 3.38
ATL1-209ENST00000556478 PBRM1Q86U86 1689 aa36.13■■■■□ 3.37
ATL1-209ENST00000556478 ARHGEF11O15085 1522 aa36.1■■■■□ 3.37
ATL1-209ENST00000556478 GRIN2BQ13224 1484 aa36.05■■■■□ 3.36
ATL1-209ENST00000556478 BIVM-ERCC5R4GMW8 1640 aa36.02■■■■□ 3.36
ATL1-209ENST00000556478 GAPVD1Q14C86 1478 aa36■■■■□ 3.35
ATL1-209ENST00000556478 SYNJ1O43426 1573 aa36■■■■□ 3.35
ATL1-209ENST00000556478 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
ATL1-209ENST00000556478 CHMP7Q8WUX9 453 aaPredicted RBP35.99■■■■□ 3.35
ATL1-209ENST00000556478 ABCA10Q8WWZ4 1543 aa35.98■■■■□ 3.35
ATL1-209ENST00000556478 TOP2BQ02880 1626 aa35.97■■■■□ 3.35
ATL1-209ENST00000556478 ABCA5Q8WWZ7 1642 aa35.97■■■■□ 3.35
ATL1-209ENST00000556478 WRNQ14191 1432 aaPredicted RBP eCLIP35.96■■■■□ 3.35
ATL1-209ENST00000556478 SYNJ2O15056 1496 aa35.88■■■■□ 3.33
ATL1-209ENST00000556478 CYB5RLQ6IPT4 315 aa35.86■■■■□ 3.33
ATL1-209ENST00000556478 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
ATL1-209ENST00000556478 ARAP1Q96P48 1450 aa35.77■■■■□ 3.32
ATL1-209ENST00000556478 ADAMTS12P58397 1594 aa35.68■■■■□ 3.3
ATL1-209ENST00000556478 GRIN2AQ12879 1464 aa35.6■■■■□ 3.29
ATL1-209ENST00000556478 ERICH3Q5RHP9 1530 aa35.54■■■■□ 3.28
ATL1-209ENST00000556478 CEP170Q5SW79 1584 aa35.53■■■■□ 3.28
ATL1-209ENST00000556478 FHAD1B1AJZ9 1412 aa35.51■■■■□ 3.28
ATL1-209ENST00000556478 NUP160Q12769 1436 aa35.41■■■■□ 3.26
ATL1-209ENST00000556478 ERCC6L2Q5T890 1561 aa35.41■■■■□ 3.26
ATL1-209ENST00000556478 TRHP20396 242 aaPredicted RBP35.4■■■■□ 3.26
ATL1-209ENST00000556478 SHROOM2Q13796 1616 aa35.3■■■■□ 3.24
ATL1-209ENST00000556478 KIF27Q86VH2 1401 aa35.23■■■■□ 3.23
ATL1-209ENST00000556478 CUL7Q14999 1698 aa35.18■■■■□ 3.22
ATL1-209ENST00000556478 RUSC2Q8N2Y8 1516 aa35.16■■■■□ 3.22
ATL1-209ENST00000556478 IGF1RP08069 1367 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms