RNA–Protein interactions for RNA: ENST00000556372.2

GPATCH2L-208, Transcript of G-patch domain containing 2 like, humanhuman

TSL 3

Gene GPATCH2L, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-208ENST00000556372 NISCHQ9Y2I1 1504 aa17.99■□□□□ 0.47
GPATCH2L-208ENST00000556372 ABCC9O60706 1549 aa16.32■□□□□ 0.2
GPATCH2L-208ENST00000556372 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
GPATCH2L-208ENST00000556372 DNAJC5BQ9UF47 199 aa15.43■□□□□ 0.06
GPATCH2L-208ENST00000556372 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
GPATCH2L-208ENST00000556372 DCAF8L2P0C7V8 631 aa15.26■□□□□ 0.03
GPATCH2L-208ENST00000556372 NACADO15069 1562 aa15.24■□□□□ 0.03
GPATCH2L-208ENST00000556372 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
GPATCH2L-208ENST00000556372 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
GPATCH2L-208ENST00000556372 BICRAQ9NZM4 1560 aa15.04■□□□□ -0
GPATCH2L-208ENST00000556372 MYO15BQ96JP2 1530 aa14.96□□□□□ -0.02
GPATCH2L-208ENST00000556372 ZCCHC6Q5VYS8 1495 aaKnown RBP14.9□□□□□ -0.02
GPATCH2L-208ENST00000556372 SCRIBQ14160 1630 aa14.81□□□□□ -0.04
GPATCH2L-208ENST00000556372 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.04
GPATCH2L-208ENST00000556372 CC2D2AQ9P2K1 1620 aa14.7□□□□□ -0.06
GPATCH2L-208ENST00000556372 CECR2Q9BXF3 1484 aa14.65□□□□□ -0.06
GPATCH2L-208ENST00000556372 EIF4G1Q04637 1599 aaKnown RBP14.64□□□□□ -0.07
GPATCH2L-208ENST00000556372 SHROOM4Q9ULL8 1493 aa14.63□□□□□ -0.07
GPATCH2L-208ENST00000556372 NCAPD3P42695 1498 aa14.09□□□□□ -0.15
GPATCH2L-208ENST00000556372 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
GPATCH2L-208ENST00000556372 DNAJC5Q9H3Z4 198 aa14.08□□□□□ -0.16
GPATCH2L-208ENST00000556372 SMARCA4P51532 1647 aa14.07□□□□□ -0.16
GPATCH2L-208ENST00000556372 NESP48681 1621 aa14.04□□□□□ -0.16
GPATCH2L-208ENST00000556372 ERCC6Q03468 1493 aa14.02□□□□□ -0.16
GPATCH2L-208ENST00000556372 SMARCA2P51531 1590 aa13.98□□□□□ -0.17
GPATCH2L-208ENST00000556372 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
GPATCH2L-208ENST00000556372 CUX2O14529 1486 aa13.97□□□□□ -0.17
GPATCH2L-208ENST00000556372 BAZ1BQ9UIG0 1483 aaKnown RBP13.93□□□□□ -0.18
GPATCH2L-208ENST00000556372 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
GPATCH2L-208ENST00000556372 BAZ1AQ9NRL2 1556 aaPredicted RBP13.93□□□□□ -0.18
GPATCH2L-208ENST00000556372 PEG3Q9GZU2 1588 aa13.88□□□□□ -0.19
GPATCH2L-208ENST00000556372 THOC2Q8NI27 1593 aaKnown RBP13.84□□□□□ -0.19
GPATCH2L-208ENST00000556372 KIF21AQ7Z4S6 1674 aa13.81□□□□□ -0.2
GPATCH2L-208ENST00000556372 LAMC3Q9Y6N6 1575 aa13.77□□□□□ -0.21
GPATCH2L-208ENST00000556372 WIZO95785 1651 aa13.76□□□□□ -0.21
GPATCH2L-208ENST00000556372 PDS5BQ9NTI5 1447 aa13.68□□□□□ -0.22
GPATCH2L-208ENST00000556372 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
GPATCH2L-208ENST00000556372 MRC2Q9UBG0 1479 aa13.62□□□□□ -0.23
GPATCH2L-208ENST00000556372 WDR62O43379 1518 aa13.6□□□□□ -0.23
GPATCH2L-208ENST00000556372 RSF1Q96T23 1441 aaPredicted RBP13.58□□□□□ -0.24
GPATCH2L-208ENST00000556372 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
GPATCH2L-208ENST00000556372 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
GPATCH2L-208ENST00000556372 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
GPATCH2L-208ENST00000556372 TOP2AP11388 1531 aaKnown RBP13.51□□□□□ -0.25
GPATCH2L-208ENST00000556372 CFTRP13569 1480 aa13.51□□□□□ -0.25
GPATCH2L-208ENST00000556372 URB2Q14146 1524 aaKnown RBP13.49□□□□□ -0.25
GPATCH2L-208ENST00000556372 CCDC88BA6NC98 1476 aa13.4□□□□□ -0.26
GPATCH2L-208ENST00000556372 ZNF608Q9ULD9 1512 aaPredicted RBP13.37□□□□□ -0.27
GPATCH2L-208ENST00000556372 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
GPATCH2L-208ENST00000556372 OSCARQ8IYS5 282 aa13.32□□□□□ -0.28
GPATCH2L-208ENST00000556372 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
GPATCH2L-208ENST00000556372 IFT140Q96RY7 1462 aa13.26□□□□□ -0.29
GPATCH2L-208ENST00000556372 RIMBP3CA6NJZ7 1639 aa13.25□□□□□ -0.29
GPATCH2L-208ENST00000556372 RIMBP3BA6NNM3 1639 aa13.25□□□□□ -0.29
GPATCH2L-208ENST00000556372 RIMBP3Q9UFD9 1639 aa13.25□□□□□ -0.29
GPATCH2L-208ENST00000556372 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
GPATCH2L-208ENST00000556372 DNMBPQ6XZF7 1577 aa13.22□□□□□ -0.29
GPATCH2L-208ENST00000556372 AQRO60306 1485 aaKnown RBP eCLIP13.21□□□□□ -0.35e-6■■■□□ 16.9
GPATCH2L-208ENST00000556372 TARBP1Q13395 1621 aaKnown RBP13.2□□□□□ -0.3
GPATCH2L-208ENST00000556372 ARHGEF11O15085 1522 aa13.18□□□□□ -0.3
GPATCH2L-208ENST00000556372 RAD54L2Q9Y4B4 1467 aa13.17□□□□□ -0.3
GPATCH2L-208ENST00000556372 POLA1P09884 1462 aaPredicted RBP13.16□□□□□ -0.3
GPATCH2L-208ENST00000556372 CHD1O14646 1710 aa13.16□□□□□ -0.3
GPATCH2L-208ENST00000556372 ABCC8Q09428 1581 aa13.13□□□□□ -0.31
GPATCH2L-208ENST00000556372 TDRD9Q8NDG6 1382 aaKnown RBP13.11□□□□□ -0.31
GPATCH2L-208ENST00000556372 FBLN2P98095 1184 aa13.11□□□□□ -0.31
GPATCH2L-208ENST00000556372 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
GPATCH2L-208ENST00000556372 CYB5RLQ6IPT4 315 aa13.09□□□□□ -0.31
GPATCH2L-208ENST00000556372 CUX1P39880 1505 aa13.08□□□□□ -0.31
GPATCH2L-208ENST00000556372 FGD5Q6ZNL6 1462 aa13.08□□□□□ -0.32
GPATCH2L-208ENST00000556372 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
GPATCH2L-208ENST00000556372 SOGA1O94964 1423 aa13.07□□□□□ -0.32
GPATCH2L-208ENST00000556372 SNAPC4Q5SXM2 1469 aa13.06□□□□□ -0.32
GPATCH2L-208ENST00000556372 CLASP1Q7Z460 1538 aa12.99□□□□□ -0.33
GPATCH2L-208ENST00000556372 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
GPATCH2L-208ENST00000556372 SUPT5HO00267 1087 aaKnown RBP12.97□□□□□ -0.33
GPATCH2L-208ENST00000556372 TRHP20396 242 aaPredicted RBP12.95□□□□□ -0.34
GPATCH2L-208ENST00000556372 CHMP7Q8WUX9 453 aaPredicted RBP12.95□□□□□ -0.34
GPATCH2L-208ENST00000556372 GRIN2BQ13224 1484 aa12.95□□□□□ -0.34
GPATCH2L-208ENST00000556372 PBRM1Q86U86 1689 aa12.94□□□□□ -0.34
GPATCH2L-208ENST00000556372 MAGI1Q96QZ7 1491 aaPredicted RBP12.93□□□□□ -0.34
GPATCH2L-208ENST00000556372 SYNJ1O43426 1573 aa12.92□□□□□ -0.34
GPATCH2L-208ENST00000556372 SYNJ2O15056 1496 aa12.91□□□□□ -0.34
GPATCH2L-208ENST00000556372 GAPVD1Q14C86 1478 aa12.91□□□□□ -0.34
GPATCH2L-208ENST00000556372 ABCA5Q8WWZ7 1642 aa12.91□□□□□ -0.34
GPATCH2L-208ENST00000556372 ERCC6L2Q5T890 1561 aa12.88□□□□□ -0.35
GPATCH2L-208ENST00000556372 ABCA10Q8WWZ4 1543 aa12.88□□□□□ -0.35
GPATCH2L-208ENST00000556372 ADAMTS12P58397 1594 aa12.81□□□□□ -0.36
GPATCH2L-208ENST00000556372 CEP170Q5SW79 1584 aa12.81□□□□□ -0.36
GPATCH2L-208ENST00000556372 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
GPATCH2L-208ENST00000556372 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
GPATCH2L-208ENST00000556372 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
GPATCH2L-208ENST00000556372 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
GPATCH2L-208ENST00000556372 NUP160Q12769 1436 aa12.76□□□□□ -0.37
GPATCH2L-208ENST00000556372 FHAD1B1AJZ9 1412 aa12.72□□□□□ -0.37
GPATCH2L-208ENST00000556372 SHROOM2Q13796 1616 aa12.72□□□□□ -0.37
GPATCH2L-208ENST00000556372 ERICH3Q5RHP9 1530 aa12.69□□□□□ -0.38
GPATCH2L-208ENST00000556372 PRG4Q92954 1404 aaPredicted RBP12.66□□□□□ -0.38
GPATCH2L-208ENST00000556372 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
GPATCH2L-208ENST00000556372 KIF13AQ9H1H9 1805 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms