RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 NISCHQ9Y2I1 1504 aa22.52■■□□□ 1.2
ITGA7-216ENST00000556371 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
ITGA7-216ENST00000556371 ZCCHC6Q5VYS8 1495 aaKnown RBP18.88■□□□□ 0.61
ITGA7-216ENST00000556371 DCAF8L2P0C7V8 631 aa18.72■□□□□ 0.59
ITGA7-216ENST00000556371 ABCC9O60706 1549 aa18.64■□□□□ 0.58
ITGA7-216ENST00000556371 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
ITGA7-216ENST00000556371 SHROOM4Q9ULL8 1493 aa18.39■□□□□ 0.54
ITGA7-216ENST00000556371 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
ITGA7-216ENST00000556371 NACADO15069 1562 aa18.3■□□□□ 0.52
ITGA7-216ENST00000556371 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
ITGA7-216ENST00000556371 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
ITGA7-216ENST00000556371 SUPT5HO00267 1087 aaKnown RBP17.72■□□□□ 0.43
ITGA7-216ENST00000556371 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
ITGA7-216ENST00000556371 PABPN1Q86U42 306 aaKnown RBP eCLIP17.65■□□□□ 0.42
ITGA7-216ENST00000556371 BICRAQ9NZM4 1560 aa17.61■□□□□ 0.41
ITGA7-216ENST00000556371 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
ITGA7-216ENST00000556371 RSF1Q96T23 1441 aaPredicted RBP17.48■□□□□ 0.39
ITGA7-216ENST00000556371 MROH2BQ7Z745 1585 aa17.4■□□□□ 0.38
ITGA7-216ENST00000556371 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
ITGA7-216ENST00000556371 SMARCA4P51532 1647 aa17.29■□□□□ 0.36
ITGA7-216ENST00000556371 WIZO95785 1651 aa17.23■□□□□ 0.35
ITGA7-216ENST00000556371 PEG3Q9GZU2 1588 aa17.07■□□□□ 0.32
ITGA7-216ENST00000556371 EIF4G1Q04637 1599 aaKnown RBP17.06■□□□□ 0.32
ITGA7-216ENST00000556371 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
ITGA7-216ENST00000556371 TOP2AP11388 1531 aaKnown RBP17.05■□□□□ 0.32
ITGA7-216ENST00000556371 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
ITGA7-216ENST00000556371 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
ITGA7-216ENST00000556371 CCDC88BA6NC98 1476 aa16.93■□□□□ 0.3
ITGA7-216ENST00000556371 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
ITGA7-216ENST00000556371 NCAPD3P42695 1498 aa16.93■□□□□ 0.3
ITGA7-216ENST00000556371 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
ITGA7-216ENST00000556371 CC2D2AQ9P2K1 1620 aa16.83■□□□□ 0.28
ITGA7-216ENST00000556371 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
ITGA7-216ENST00000556371 DNAJC5BQ9UF47 199 aa16.57■□□□□ 0.24
ITGA7-216ENST00000556371 CFTRP13569 1480 aa16.53■□□□□ 0.24
ITGA7-216ENST00000556371 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
ITGA7-216ENST00000556371 CADPSQ9ULU8 1353 aa16.51■□□□□ 0.23
ITGA7-216ENST00000556371 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
ITGA7-216ENST00000556371 FAM9AQ8IZU1 332 aaPredicted RBP16.37■□□□□ 0.21
ITGA7-216ENST00000556371 NESP48681 1621 aa16.36■□□□□ 0.21
ITGA7-216ENST00000556371 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
ITGA7-216ENST00000556371 LOC105371045A0A1W2PR82 267 aa16.33■□□□□ 0.2
ITGA7-216ENST00000556371 PRDM2Q13029 1718 aa16.31■□□□□ 0.2
ITGA7-216ENST00000556371 LAMC3Q9Y6N6 1575 aa16.3■□□□□ 0.2
ITGA7-216ENST00000556371 FANCD2Q9BXW9 1451 aa16.29■□□□□ 0.2
ITGA7-216ENST00000556371 TOP2BQ02880 1626 aa16.27■□□□□ 0.2
ITGA7-216ENST00000556371 CUX1P39880 1505 aa16.27■□□□□ 0.2
ITGA7-216ENST00000556371 SOGA1O94964 1423 aa16.25■□□□□ 0.19
ITGA7-216ENST00000556371 BIVM-ERCC5R4GMW8 1640 aa16.23■□□□□ 0.19
ITGA7-216ENST00000556371 PDS5BQ9NTI5 1447 aa16.23■□□□□ 0.19
ITGA7-216ENST00000556371 RUSC2Q8N2Y8 1516 aa16.2■□□□□ 0.18
ITGA7-216ENST00000556371 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
ITGA7-216ENST00000556371 EEA1Q15075 1411 aa16.18■□□□□ 0.18
ITGA7-216ENST00000556371 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
ITGA7-216ENST00000556371 EHMT2Q96KQ7 1210 aa16.14■□□□□ 0.17
ITGA7-216ENST00000556371 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
ITGA7-216ENST00000556371 DNMBPQ6XZF7 1577 aa16.11■□□□□ 0.17
ITGA7-216ENST00000556371 FGD5Q6ZNL6 1462 aa16.1■□□□□ 0.17
ITGA7-216ENST00000556371 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
ITGA7-216ENST00000556371 KIF21AQ7Z4S6 1674 aa16.08■□□□□ 0.17
ITGA7-216ENST00000556371 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
ITGA7-216ENST00000556371 POLA1P09884 1462 aaPredicted RBP16.02■□□□□ 0.15
ITGA7-216ENST00000556371 RAD54L2Q9Y4B4 1467 aa16.01■□□□□ 0.15
ITGA7-216ENST00000556371 CUX2O14529 1486 aa16■□□□□ 0.15
ITGA7-216ENST00000556371 MRC2Q9UBG0 1479 aa16■□□□□ 0.15
ITGA7-216ENST00000556371 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
ITGA7-216ENST00000556371 UBTFP17480 764 aaKnown RBP15.96■□□□□ 0.15
ITGA7-216ENST00000556371 IGF1RP08069 1367 aa15.95■□□□□ 0.14
ITGA7-216ENST00000556371 GOLGA3Q08378 1498 aa15.95■□□□□ 0.14
ITGA7-216ENST00000556371 ABCA10Q8WWZ4 1543 aa15.94■□□□□ 0.14
ITGA7-216ENST00000556371 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
ITGA7-216ENST00000556371 KIF21BO75037 1637 aa15.93■□□□□ 0.14
ITGA7-216ENST00000556371 PRXQ9BXM0 1461 aa15.91■□□□□ 0.14
ITGA7-216ENST00000556371 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
ITGA7-216ENST00000556371 WDR62O43379 1518 aa15.89■□□□□ 0.13
ITGA7-216ENST00000556371 TDRD9Q8NDG6 1382 aaKnown RBP15.88■□□□□ 0.13
ITGA7-216ENST00000556371 TARBP1Q13395 1621 aaKnown RBP15.85■□□□□ 0.13
ITGA7-216ENST00000556371 CARMIL1Q5VZK9 1371 aa15.85■□□□□ 0.13
ITGA7-216ENST00000556371 ERICH3Q5RHP9 1530 aa15.84■□□□□ 0.13
ITGA7-216ENST00000556371 THOC2Q8NI27 1593 aaKnown RBP15.83■□□□□ 0.12
ITGA7-216ENST00000556371 WDR97A6NE52 1622 aa15.83■□□□□ 0.12
ITGA7-216ENST00000556371 GAPVD1Q14C86 1478 aa15.81■□□□□ 0.12
ITGA7-216ENST00000556371 CEP162Q5TB80 1403 aa15.81■□□□□ 0.12
ITGA7-216ENST00000556371 IFT140Q96RY7 1462 aa15.81■□□□□ 0.12
ITGA7-216ENST00000556371 ABCA5Q8WWZ7 1642 aa15.78■□□□□ 0.12
ITGA7-216ENST00000556371 AQRO60306 1485 aaKnown RBP eCLIP15.77■□□□□ 0.11
ITGA7-216ENST00000556371 ZNF608Q9ULD9 1512 aaPredicted RBP15.73■□□□□ 0.11
ITGA7-216ENST00000556371 CLIP1P30622 1438 aa15.72■□□□□ 0.11
ITGA7-216ENST00000556371 RANGAP1P46060 587 aaPredicted RBP15.72■□□□□ 0.11
ITGA7-216ENST00000556371 CUL7Q14999 1698 aa15.71■□□□□ 0.11
ITGA7-216ENST00000556371 GRIN2BQ13224 1484 aa15.69■□□□□ 0.1
ITGA7-216ENST00000556371 FHAD1B1AJZ9 1412 aa15.65■□□□□ 0.1
ITGA7-216ENST00000556371 PBRM1Q86U86 1689 aa15.64■□□□□ 0.09
ITGA7-216ENST00000556371 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
ITGA7-216ENST00000556371 SNAPC4Q5SXM2 1469 aa15.58■□□□□ 0.08
ITGA7-216ENST00000556371 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
ITGA7-216ENST00000556371 PPARGC1BQ86YN6 1023 aaKnown RBP15.56■□□□□ 0.08
ITGA7-216ENST00000556371 ARHGAP35Q9NRY4 1499 aa15.56■□□□□ 0.08
ITGA7-216ENST00000556371 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
ITGA7-216ENST00000556371 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms