RNA–Protein interactions for RNA: ENST00000556216.5

CGRRF1-204, Transcript of cell growth regulator with ring finger domain 1, humanhuman

TSL 5

Gene CGRRF1, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-204ENST00000556216 NISCHQ9Y2I1 1504 aa36.41■■■■□ 3.42
CGRRF1-204ENST00000556216 CCDC180Q9P1Z9 1646 aa32.38■■■□□ 2.77
CGRRF1-204ENST00000556216 ABCC9O60706 1549 aa32.06■■■□□ 2.72
CGRRF1-204ENST00000556216 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
CGRRF1-204ENST00000556216 RB1CC1Q8TDY2 1594 aa30.6■■■□□ 2.49
CGRRF1-204ENST00000556216 NACADO15069 1562 aa30.5■■■□□ 2.47
CGRRF1-204ENST00000556216 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
CGRRF1-204ENST00000556216 MYO15BQ96JP2 1530 aa30.2■■■□□ 2.42
CGRRF1-204ENST00000556216 UNC13AQ9UPW8 1703 aa30.04■■■□□ 2.4
CGRRF1-204ENST00000556216 DCAF1Q9Y4B6 1507 aa30.01■■■□□ 2.39
CGRRF1-204ENST00000556216 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
CGRRF1-204ENST00000556216 BICRAQ9NZM4 1560 aa29.79■■■□□ 2.36
CGRRF1-204ENST00000556216 DNAJC5BQ9UF47 199 aa29.73■■■□□ 2.35
CGRRF1-204ENST00000556216 SCRIBQ14160 1630 aa29.67■■■□□ 2.34
CGRRF1-204ENST00000556216 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
CGRRF1-204ENST00000556216 EIF4G1Q04637 1599 aaKnown RBP28.99■■■□□ 2.23
CGRRF1-204ENST00000556216 CC2D2AQ9P2K1 1620 aa28.95■■■□□ 2.23
CGRRF1-204ENST00000556216 CECR2Q9BXF3 1484 aa28.78■■■□□ 2.2
CGRRF1-204ENST00000556216 SMARCA4P51532 1647 aa28.3■■■□□ 2.12
CGRRF1-204ENST00000556216 ATAD2BQ9ULI0 1458 aa28.21■■■□□ 2.11
CGRRF1-204ENST00000556216 NCAPD3P42695 1498 aa28.19■■■□□ 2.1
CGRRF1-204ENST00000556216 BAZ1AQ9NRL2 1556 aaPredicted RBP28.19■■■□□ 2.1
CGRRF1-204ENST00000556216 MROH2BQ7Z745 1585 aa28.11■■■□□ 2.09
CGRRF1-204ENST00000556216 SMARCA2P51531 1590 aa28.09■■■□□ 2.09
CGRRF1-204ENST00000556216 HMGXB3Q12766 1538 aa28■■■□□ 2.07
CGRRF1-204ENST00000556216 PEG3Q9GZU2 1588 aa27.98■■■□□ 2.07
CGRRF1-204ENST00000556216 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
CGRRF1-204ENST00000556216 WIZO95785 1651 aa27.82■■■□□ 2.04
CGRRF1-204ENST00000556216 NESP48681 1621 aa27.71■■■□□ 2.03
CGRRF1-204ENST00000556216 RSF1Q96T23 1441 aaPredicted RBP27.69■■■□□ 2.02
CGRRF1-204ENST00000556216 ERCC6Q03468 1493 aa27.57■■■□□ 2
CGRRF1-204ENST00000556216 LAMC3Q9Y6N6 1575 aa27.46■■□□□ 1.99
CGRRF1-204ENST00000556216 TOP2AP11388 1531 aaKnown RBP27.41■■□□□ 1.98
CGRRF1-204ENST00000556216 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
CGRRF1-204ENST00000556216 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
CGRRF1-204ENST00000556216 CUX2O14529 1486 aa27.29■■□□□ 1.96
CGRRF1-204ENST00000556216 PDS5BQ9NTI5 1447 aa27.27■■□□□ 1.96
CGRRF1-204ENST00000556216 THOC2Q8NI27 1593 aaKnown RBP27.25■■□□□ 1.95
CGRRF1-204ENST00000556216 CFTRP13569 1480 aa27.16■■□□□ 1.94
CGRRF1-204ENST00000556216 CCDC88BA6NC98 1476 aa27.16■■□□□ 1.94
CGRRF1-204ENST00000556216 FANCD2Q9BXW9 1451 aa27.07■■□□□ 1.92
CGRRF1-204ENST00000556216 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
CGRRF1-204ENST00000556216 CEP164Q9UPV0 1460 aa27.03■■□□□ 1.92
CGRRF1-204ENST00000556216 WDR62O43379 1518 aa26.96■■□□□ 1.91
CGRRF1-204ENST00000556216 SUPT5HO00267 1087 aaKnown RBP26.91■■□□□ 1.9
CGRRF1-204ENST00000556216 PRDM2Q13029 1718 aa26.91■■□□□ 1.9
CGRRF1-204ENST00000556216 URB2Q14146 1524 aaKnown RBP26.85■■□□□ 1.89
CGRRF1-204ENST00000556216 DNAJC5Q9H3Z4 198 aa26.82■■□□□ 1.88
CGRRF1-204ENST00000556216 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
CGRRF1-204ENST00000556216 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
CGRRF1-204ENST00000556216 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
CGRRF1-204ENST00000556216 ZNF608Q9ULD9 1512 aaPredicted RBP26.48■■□□□ 1.83
CGRRF1-204ENST00000556216 IFT140Q96RY7 1462 aa26.46■■□□□ 1.83
CGRRF1-204ENST00000556216 POLA1P09884 1462 aaPredicted RBP26.39■■□□□ 1.82
CGRRF1-204ENST00000556216 CUX1P39880 1505 aa26.37■■□□□ 1.81
CGRRF1-204ENST00000556216 TARBP1Q13395 1621 aaKnown RBP26.36■■□□□ 1.81
CGRRF1-204ENST00000556216 RAD54L2Q9Y4B4 1467 aa26.35■■□□□ 1.81
CGRRF1-204ENST00000556216 FGD5Q6ZNL6 1462 aa26.31■■□□□ 1.8
CGRRF1-204ENST00000556216 EIF4G3O43432 1585 aaKnown RBP26.3■■□□□ 1.8
CGRRF1-204ENST00000556216 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
CGRRF1-204ENST00000556216 SOGA1O94964 1423 aa26.27■■□□□ 1.8
CGRRF1-204ENST00000556216 TDRD9Q8NDG6 1382 aaKnown RBP26.21■■□□□ 1.79
CGRRF1-204ENST00000556216 OSCARQ8IYS5 282 aa26.2■■□□□ 1.78
CGRRF1-204ENST00000556216 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
CGRRF1-204ENST00000556216 WRNQ14191 1432 aaPredicted RBP eCLIP26.09■■□□□ 1.77
CGRRF1-204ENST00000556216 WDR97A6NE52 1622 aa26.07■■□□□ 1.76
CGRRF1-204ENST00000556216 CHD1O14646 1710 aa26.04■■□□□ 1.76
CGRRF1-204ENST00000556216 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
CGRRF1-204ENST00000556216 FBLN2P98095 1184 aa26.03■■□□□ 1.76
CGRRF1-204ENST00000556216 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
CGRRF1-204ENST00000556216 SNAPC4Q5SXM2 1469 aa26■■□□□ 1.75
CGRRF1-204ENST00000556216 ABCA10Q8WWZ4 1543 aa25.99■■□□□ 1.75
CGRRF1-204ENST00000556216 GAPVD1Q14C86 1478 aa25.95■■□□□ 1.74
CGRRF1-204ENST00000556216 GRIN2BQ13224 1484 aa25.94■■□□□ 1.74
CGRRF1-204ENST00000556216 ABCA5Q8WWZ7 1642 aa25.92■■□□□ 1.74
CGRRF1-204ENST00000556216 PBRM1Q86U86 1689 aa25.92■■□□□ 1.74
CGRRF1-204ENST00000556216 TRIM41Q8WV44 630 aa25.92■■□□□ 1.74
CGRRF1-204ENST00000556216 MAGI1Q96QZ7 1491 aaPredicted RBP25.88■■□□□ 1.73
CGRRF1-204ENST00000556216 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
CGRRF1-204ENST00000556216 RIMBP3CA6NJZ7 1639 aa25.83■■□□□ 1.73
CGRRF1-204ENST00000556216 RIMBP3BA6NNM3 1639 aa25.83■■□□□ 1.73
CGRRF1-204ENST00000556216 RIMBP3Q9UFD9 1639 aa25.83■■□□□ 1.73
CGRRF1-204ENST00000556216 SYNJ2O15056 1496 aa25.81■■□□□ 1.72
CGRRF1-204ENST00000556216 ARHGEF11O15085 1522 aa25.79■■□□□ 1.72
CGRRF1-204ENST00000556216 CLASP1Q7Z460 1538 aa25.71■■□□□ 1.71
CGRRF1-204ENST00000556216 ADAMTS12P58397 1594 aa25.69■■□□□ 1.7
CGRRF1-204ENST00000556216 ERICH3Q5RHP9 1530 aa25.65■■□□□ 1.7
CGRRF1-204ENST00000556216 GRIN2AQ12879 1464 aa25.64■■□□□ 1.7
CGRRF1-204ENST00000556216 CYB5RLQ6IPT4 315 aa25.63■■□□□ 1.69
CGRRF1-204ENST00000556216 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
CGRRF1-204ENST00000556216 ARAP1Q96P48 1450 aa25.59■■□□□ 1.69
CGRRF1-204ENST00000556216 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
CGRRF1-204ENST00000556216 NUP160Q12769 1436 aa25.53■■□□□ 1.68
CGRRF1-204ENST00000556216 KIF27Q86VH2 1401 aa25.52■■□□□ 1.68
CGRRF1-204ENST00000556216 IGF1RP08069 1367 aa25.51■■□□□ 1.67
CGRRF1-204ENST00000556216 ERCC6L2Q5T890 1561 aa25.45■■□□□ 1.66
CGRRF1-204ENST00000556216 RUSC2Q8N2Y8 1516 aa25.39■■□□□ 1.66
CGRRF1-204ENST00000556216 CUL7Q14999 1698 aa25.36■■□□□ 1.65
CGRRF1-204ENST00000556216 SHROOM2Q13796 1616 aa25.36■■□□□ 1.65
CGRRF1-204ENST00000556216 CARMIL1Q5VZK9 1371 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms