RNA–Protein interactions for RNA: ENST00000556192.1

RALGAPA1-213, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 5

Gene RALGAPA1, Length 480 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-213ENST00000556192 NISCHQ9Y2I1 1504 aa59.99■■■■■ 7.19
RALGAPA1-213ENST00000556192 CCDC180Q9P1Z9 1646 aa53.69■■■■■ 6.19
RALGAPA1-213ENST00000556192 ABCC9O60706 1549 aa53.11■■■■■ 6.09
RALGAPA1-213ENST00000556192 RB1CC1Q8TDY2 1594 aa50.77■■■■■ 5.72
RALGAPA1-213ENST00000556192 NACADO15069 1562 aa50.54■■■■■ 5.68
RALGAPA1-213ENST00000556192 DCAF8L2P0C7V8 631 aa50.14■■■■■ 5.62
RALGAPA1-213ENST00000556192 MYO15BQ96JP2 1530 aa50.01■■■■■ 5.6
RALGAPA1-213ENST00000556192 ZCCHC6Q5VYS8 1495 aaKnown RBP49.88■■■■■ 5.57
RALGAPA1-213ENST00000556192 UNC13AQ9UPW8 1703 aa49.85■■■■■ 5.57
RALGAPA1-213ENST00000556192 DCAF1Q9Y4B6 1507 aa49.58■■■■■ 5.53
RALGAPA1-213ENST00000556192 PABPN1Q86U42 306 aaKnown RBP eCLIP49.43■■■■■ 5.5
RALGAPA1-213ENST00000556192 BICRAQ9NZM4 1560 aa49.41■■■■■ 5.5
RALGAPA1-213ENST00000556192 DNAJC5BQ9UF47 199 aa49.35■■■■■ 5.49
RALGAPA1-213ENST00000556192 SCRIBQ14160 1630 aa48.95■■■■■ 5.43
RALGAPA1-213ENST00000556192 SHROOM4Q9ULL8 1493 aa48.65■■■■■ 5.38
RALGAPA1-213ENST00000556192 EIF4G1Q04637 1599 aaKnown RBP48.08■■■■■ 5.29
RALGAPA1-213ENST00000556192 CC2D2AQ9P2K1 1620 aa48.06■■■■■ 5.28
RALGAPA1-213ENST00000556192 CECR2Q9BXF3 1484 aa47.75■■■■■ 5.23
RALGAPA1-213ENST00000556192 SMARCA4P51532 1647 aa46.75■■■■■ 5.07
RALGAPA1-213ENST00000556192 NCAPD3P42695 1498 aa46.62■■■■■ 5.05
RALGAPA1-213ENST00000556192 ATAD2BQ9ULI0 1458 aa46.59■■■■■ 5.05
RALGAPA1-213ENST00000556192 BAZ1AQ9NRL2 1556 aaPredicted RBP46.51■■■■■ 5.04
RALGAPA1-213ENST00000556192 SMARCA2P51531 1590 aa46.47■■■■■ 5.03
RALGAPA1-213ENST00000556192 HMGXB3Q12766 1538 aa46.41■■■■■ 5.02
RALGAPA1-213ENST00000556192 PEG3Q9GZU2 1588 aa46.29■■■■■ 5
RALGAPA1-213ENST00000556192 MROH2BQ7Z745 1585 aa46.27■■■■■ 5
RALGAPA1-213ENST00000556192 BAZ1BQ9UIG0 1483 aaKnown RBP46.14■■■■■ 4.98
RALGAPA1-213ENST00000556192 NESP48681 1621 aa45.83■■■■■ 4.93
RALGAPA1-213ENST00000556192 WIZO95785 1651 aa45.79■■■■■ 4.92
RALGAPA1-213ENST00000556192 ERCC6Q03468 1493 aa45.73■■■■■ 4.91
RALGAPA1-213ENST00000556192 LAMC3Q9Y6N6 1575 aa45.54■■■■■ 4.88
RALGAPA1-213ENST00000556192 CUX2O14529 1486 aa45.53■■■■■ 4.88
RALGAPA1-213ENST00000556192 RSF1Q96T23 1441 aaPredicted RBP45.43■■■■■ 4.86
RALGAPA1-213ENST00000556192 THOC2Q8NI27 1593 aaKnown RBP45.34■■■■■ 4.85
RALGAPA1-213ENST00000556192 KIF21AQ7Z4S6 1674 aa45.34■■■■■ 4.85
RALGAPA1-213ENST00000556192 TOP2AP11388 1531 aaKnown RBP45.19■■■■■ 4.82
RALGAPA1-213ENST00000556192 CADPSQ9ULU8 1353 aa45.19■■■■■ 4.82
RALGAPA1-213ENST00000556192 PDS5BQ9NTI5 1447 aa45.13■■■■■ 4.82
RALGAPA1-213ENST00000556192 CFTRP13569 1480 aa44.85■■■■■ 4.77
RALGAPA1-213ENST00000556192 DNAJC5Q9H3Z4 198 aa44.83■■■■■ 4.77
RALGAPA1-213ENST00000556192 MRC2Q9UBG0 1479 aa44.82■■■■■ 4.77
RALGAPA1-213ENST00000556192 WDR62O43379 1518 aa44.75■■■■■ 4.76
RALGAPA1-213ENST00000556192 FANCD2Q9BXW9 1451 aa44.73■■■■■ 4.75
RALGAPA1-213ENST00000556192 CEP164Q9UPV0 1460 aa44.73■■■■■ 4.75
RALGAPA1-213ENST00000556192 CCDC88BA6NC98 1476 aa44.63■■■■■ 4.73
RALGAPA1-213ENST00000556192 PRDM2Q13029 1718 aa44.62■■■■■ 4.73
RALGAPA1-213ENST00000556192 URB2Q14146 1524 aaKnown RBP44.41■■■■■ 4.7
RALGAPA1-213ENST00000556192 TOPBP1Q92547 1522 aa43.99■■■■■ 4.63
RALGAPA1-213ENST00000556192 DNMBPQ6XZF7 1577 aa43.88■■■■■ 4.62
RALGAPA1-213ENST00000556192 IFT140Q96RY7 1462 aa43.79■■■■■ 4.6
RALGAPA1-213ENST00000556192 ABCC8Q09428 1581 aa43.79■■■■■ 4.6
RALGAPA1-213ENST00000556192 ZNF608Q9ULD9 1512 aaPredicted RBP43.77■■■■■ 4.6
RALGAPA1-213ENST00000556192 SUPT5HO00267 1087 aaKnown RBP43.64■■■■■ 4.58
RALGAPA1-213ENST00000556192 TARBP1Q13395 1621 aaKnown RBP43.63■■■■■ 4.58
RALGAPA1-213ENST00000556192 EIF4G3O43432 1585 aaKnown RBP43.61■■■■■ 4.57
RALGAPA1-213ENST00000556192 POLA1P09884 1462 aaPredicted RBP43.57■■■■■ 4.56
RALGAPA1-213ENST00000556192 CUX1P39880 1505 aa43.46■■■■■ 4.55
RALGAPA1-213ENST00000556192 RAD54L2Q9Y4B4 1467 aa43.39■■■■■ 4.54
RALGAPA1-213ENST00000556192 FGD5Q6ZNL6 1462 aa43.37■■■■■ 4.53
RALGAPA1-213ENST00000556192 OSCARQ8IYS5 282 aa43.36■■■■■ 4.53
RALGAPA1-213ENST00000556192 AQRO60306 1485 aaKnown RBP eCLIP43.36■■■■■ 4.53
RALGAPA1-213ENST00000556192 SOGA1O94964 1423 aa43.27■■■■■ 4.52
RALGAPA1-213ENST00000556192 CHD1O14646 1710 aa43.22■■■■■ 4.51
RALGAPA1-213ENST00000556192 WDR97A6NE52 1622 aa43.19■■■■■ 4.51
RALGAPA1-213ENST00000556192 TDRD9Q8NDG6 1382 aaKnown RBP43.15■■■■■ 4.5
RALGAPA1-213ENST00000556192 TRIM41Q8WV44 630 aa43.05■■■■■ 4.48
RALGAPA1-213ENST00000556192 RIMBP3CA6NJZ7 1639 aa43.02■■■■■ 4.48
RALGAPA1-213ENST00000556192 RIMBP3BA6NNM3 1639 aa43.02■■■■■ 4.48
RALGAPA1-213ENST00000556192 RIMBP3Q9UFD9 1639 aa43.02■■■■■ 4.48
RALGAPA1-213ENST00000556192 SNAPC4Q5SXM2 1469 aa42.98■■■■■ 4.47
RALGAPA1-213ENST00000556192 BIVM-ERCC5R4GMW8 1640 aa42.93■■■■■ 4.46
RALGAPA1-213ENST00000556192 PBRM1Q86U86 1689 aa42.92■■■■■ 4.46
RALGAPA1-213ENST00000556192 SYNJ1O43426 1573 aa42.9■■■■■ 4.46
RALGAPA1-213ENST00000556192 ARHGEF11O15085 1522 aa42.89■■■■■ 4.46
RALGAPA1-213ENST00000556192 ABCA10Q8WWZ4 1543 aa42.89■■■■■ 4.46
RALGAPA1-213ENST00000556192 ABCA5Q8WWZ7 1642 aa42.89■■■■■ 4.46
RALGAPA1-213ENST00000556192 TOP2BQ02880 1626 aa42.88■■■■■ 4.45
RALGAPA1-213ENST00000556192 GRIN2BQ13224 1484 aa42.87■■■■■ 4.45
RALGAPA1-213ENST00000556192 MAGI1Q96QZ7 1491 aaPredicted RBP42.84■■■■■ 4.45
RALGAPA1-213ENST00000556192 WRNQ14191 1432 aaPredicted RBP eCLIP42.81■■■■■ 4.44
RALGAPA1-213ENST00000556192 FBLN2P98095 1184 aa42.81■■■■■ 4.44
RALGAPA1-213ENST00000556192 GAPVD1Q14C86 1478 aa42.8■■■■■ 4.44
RALGAPA1-213ENST00000556192 CLASP1Q7Z460 1538 aa42.7■■■■■ 4.43
RALGAPA1-213ENST00000556192 SYNJ2O15056 1496 aa42.69■■■■■ 4.42
RALGAPA1-213ENST00000556192 CHMP7Q8WUX9 453 aaPredicted RBP42.57■■■■■ 4.41
RALGAPA1-213ENST00000556192 ARAP1Q96P48 1450 aa42.54■■■■■ 4.4
RALGAPA1-213ENST00000556192 ADAMTS12P58397 1594 aa42.51■■■■■ 4.4
RALGAPA1-213ENST00000556192 GRIN2AQ12879 1464 aa42.37■■■■■ 4.37
RALGAPA1-213ENST00000556192 ERICH3Q5RHP9 1530 aa42.36■■■■■ 4.37
RALGAPA1-213ENST00000556192 CYB5RLQ6IPT4 315 aa42.35■■■■■ 4.37
RALGAPA1-213ENST00000556192 CEP170Q5SW79 1584 aa42.29■■■■■ 4.36
RALGAPA1-213ENST00000556192 FHAD1B1AJZ9 1412 aa42.26■■■■■ 4.36
RALGAPA1-213ENST00000556192 NUP160Q12769 1436 aa42.22■■■■■ 4.35
RALGAPA1-213ENST00000556192 ERCC6L2Q5T890 1561 aa42.1■■■■■ 4.33
RALGAPA1-213ENST00000556192 SHROOM2Q13796 1616 aa42.06■■■■■ 4.32
RALGAPA1-213ENST00000556192 RUSC2Q8N2Y8 1516 aa41.91■■■■■ 4.3
RALGAPA1-213ENST00000556192 KIF27Q86VH2 1401 aa41.91■■■■■ 4.3
RALGAPA1-213ENST00000556192 CUL7Q14999 1698 aa41.88■■■■■ 4.29
RALGAPA1-213ENST00000556192 IGF1RP08069 1367 aa41.87■■■■■ 4.29
RALGAPA1-213ENST00000556192 PRG4Q92954 1404 aaPredicted RBP41.69■■■■■ 4.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms