RNA–Protein interactions for RNA: ENST00000556091.1

SERPINA1-214, Transcript of serpin family A member 1, humanhuman

TSL 3

Gene SERPINA1, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-214ENST00000556091 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
SERPINA1-214ENST00000556091 ABCC9O60706 1549 aa28.05■■■□□ 2.08
SERPINA1-214ENST00000556091 CCDC180Q9P1Z9 1646 aa27.98■■■□□ 2.07
SERPINA1-214ENST00000556091 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
SERPINA1-214ENST00000556091 NACADO15069 1562 aa26.46■■□□□ 1.83
SERPINA1-214ENST00000556091 DCAF8L2P0C7V8 631 aa26.44■■□□□ 1.82
SERPINA1-214ENST00000556091 DNAJC5BQ9UF47 199 aa26.33■■□□□ 1.81
SERPINA1-214ENST00000556091 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
SERPINA1-214ENST00000556091 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.77
SERPINA1-214ENST00000556091 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
SERPINA1-214ENST00000556091 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
SERPINA1-214ENST00000556091 ZCCHC6Q5VYS8 1495 aaKnown RBP25.91■■□□□ 1.74
SERPINA1-214ENST00000556091 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
SERPINA1-214ENST00000556091 SCRIBQ14160 1630 aa25.58■■□□□ 1.69
SERPINA1-214ENST00000556091 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
SERPINA1-214ENST00000556091 CC2D2AQ9P2K1 1620 aa25.3■■□□□ 1.64
SERPINA1-214ENST00000556091 EIF4G1Q04637 1599 aaKnown RBP25.25■■□□□ 1.63
SERPINA1-214ENST00000556091 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
SERPINA1-214ENST00000556091 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
SERPINA1-214ENST00000556091 ATAD2BQ9ULI0 1458 aa24.39■■□□□ 1.5
SERPINA1-214ENST00000556091 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
SERPINA1-214ENST00000556091 SMARCA2P51531 1590 aa24.29■■□□□ 1.48
SERPINA1-214ENST00000556091 HMGXB3Q12766 1538 aa24.24■■□□□ 1.47
SERPINA1-214ENST00000556091 BAZ1AQ9NRL2 1556 aaPredicted RBP24.23■■□□□ 1.47
SERPINA1-214ENST00000556091 ERCC6Q03468 1493 aa24.17■■□□□ 1.46
SERPINA1-214ENST00000556091 BAZ1BQ9UIG0 1483 aaKnown RBP24.14■■□□□ 1.46
SERPINA1-214ENST00000556091 MROH2BQ7Z745 1585 aa24.12■■□□□ 1.45
SERPINA1-214ENST00000556091 NESP48681 1621 aa24.12■■□□□ 1.45
SERPINA1-214ENST00000556091 PEG3Q9GZU2 1588 aa24.11■■□□□ 1.45
SERPINA1-214ENST00000556091 DNAJC5Q9H3Z4 198 aa24.08■■□□□ 1.45
SERPINA1-214ENST00000556091 CUX2O14529 1486 aa24.07■■□□□ 1.44
SERPINA1-214ENST00000556091 LAMC3Q9Y6N6 1575 aa23.86■■□□□ 1.41
SERPINA1-214ENST00000556091 WIZO95785 1651 aa23.83■■□□□ 1.41
SERPINA1-214ENST00000556091 THOC2Q8NI27 1593 aaKnown RBP23.82■■□□□ 1.4
SERPINA1-214ENST00000556091 KIF21AQ7Z4S6 1674 aa23.77■■□□□ 1.4
SERPINA1-214ENST00000556091 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
SERPINA1-214ENST00000556091 CADPSQ9ULU8 1353 aa23.71■■□□□ 1.39
SERPINA1-214ENST00000556091 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
SERPINA1-214ENST00000556091 MRC2Q9UBG0 1479 aa23.55■■□□□ 1.36
SERPINA1-214ENST00000556091 TOP2AP11388 1531 aaKnown RBP23.49■■□□□ 1.35
SERPINA1-214ENST00000556091 WDR62O43379 1518 aa23.48■■□□□ 1.35
SERPINA1-214ENST00000556091 FANCD2Q9BXW9 1451 aa23.46■■□□□ 1.35
SERPINA1-214ENST00000556091 CEP164Q9UPV0 1460 aa23.45■■□□□ 1.34
SERPINA1-214ENST00000556091 CFTRP13569 1480 aa23.44■■□□□ 1.34
SERPINA1-214ENST00000556091 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
SERPINA1-214ENST00000556091 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
SERPINA1-214ENST00000556091 PRDM2Q13029 1718 aa23.19■■□□□ 1.3
SERPINA1-214ENST00000556091 TRIM41Q8WV44 630 aa23.08■■□□□ 1.29
SERPINA1-214ENST00000556091 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
SERPINA1-214ENST00000556091 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
SERPINA1-214ENST00000556091 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SERPINA1-214ENST00000556091 IFT140Q96RY7 1462 aa22.98■■□□□ 1.27
SERPINA1-214ENST00000556091 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
SERPINA1-214ENST00000556091 DNMBPQ6XZF7 1577 aa22.91■■□□□ 1.26
SERPINA1-214ENST00000556091 EIF4G3O43432 1585 aaKnown RBP22.84■■□□□ 1.25
SERPINA1-214ENST00000556091 TARBP1Q13395 1621 aaKnown RBP22.81■■□□□ 1.24
SERPINA1-214ENST00000556091 AQRO60306 1485 aaKnown RBP eCLIP22.79■■□□□ 1.243e-14■■■■■ 29.8
SERPINA1-214ENST00000556091 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
SERPINA1-214ENST00000556091 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
SERPINA1-214ENST00000556091 RIMBP3CA6NJZ7 1639 aa22.74■■□□□ 1.23
SERPINA1-214ENST00000556091 RIMBP3BA6NNM3 1639 aa22.74■■□□□ 1.23
SERPINA1-214ENST00000556091 RIMBP3Q9UFD9 1639 aa22.74■■□□□ 1.23
SERPINA1-214ENST00000556091 SOGA1O94964 1423 aa22.69■■□□□ 1.22
SERPINA1-214ENST00000556091 TDRD9Q8NDG6 1382 aaKnown RBP22.67■■□□□ 1.22
SERPINA1-214ENST00000556091 CHD1O14646 1710 aa22.67■■□□□ 1.22
SERPINA1-214ENST00000556091 SUPT5HO00267 1087 aaKnown RBP22.66■■□□□ 1.22
SERPINA1-214ENST00000556091 ARHGEF11O15085 1522 aa22.66■■□□□ 1.22
SERPINA1-214ENST00000556091 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
SERPINA1-214ENST00000556091 FBLN2P98095 1184 aa22.65■■□□□ 1.22
SERPINA1-214ENST00000556091 CUX1P39880 1505 aa22.65■■□□□ 1.22
SERPINA1-214ENST00000556091 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
SERPINA1-214ENST00000556091 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
SERPINA1-214ENST00000556091 WDR97A6NE52 1622 aa22.49■■□□□ 1.19
SERPINA1-214ENST00000556091 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
SERPINA1-214ENST00000556091 ARAP1Q96P48 1450 aa22.46■■□□□ 1.19
SERPINA1-214ENST00000556091 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
SERPINA1-214ENST00000556091 MAGI1Q96QZ7 1491 aaPredicted RBP22.44■■□□□ 1.18
SERPINA1-214ENST00000556091 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
SERPINA1-214ENST00000556091 GAPVD1Q14C86 1478 aa22.4■■□□□ 1.18
SERPINA1-214ENST00000556091 PBRM1Q86U86 1689 aa22.39■■□□□ 1.17
SERPINA1-214ENST00000556091 SYNJ2O15056 1496 aa22.38■■□□□ 1.17
SERPINA1-214ENST00000556091 ABCA10Q8WWZ4 1543 aa22.37■■□□□ 1.17
SERPINA1-214ENST00000556091 SYNJ1O43426 1573 aa22.37■■□□□ 1.17
SERPINA1-214ENST00000556091 ABCA5Q8WWZ7 1642 aa22.35■■□□□ 1.17
SERPINA1-214ENST00000556091 WRNQ14191 1432 aaPredicted RBP eCLIP22.29■■□□□ 1.16
SERPINA1-214ENST00000556091 BIVM-ERCC5R4GMW8 1640 aa22.27■■□□□ 1.16
SERPINA1-214ENST00000556091 TRHP20396 242 aaPredicted RBP22.26■■□□□ 1.15
SERPINA1-214ENST00000556091 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
SERPINA1-214ENST00000556091 GRIN2AQ12879 1464 aa22.19■■□□□ 1.14
SERPINA1-214ENST00000556091 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
SERPINA1-214ENST00000556091 CEP170Q5SW79 1584 aa22.13■■□□□ 1.13
SERPINA1-214ENST00000556091 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
SERPINA1-214ENST00000556091 FHAD1B1AJZ9 1412 aa22.11■■□□□ 1.13
SERPINA1-214ENST00000556091 NUP160Q12769 1436 aa22.1■■□□□ 1.13
SERPINA1-214ENST00000556091 ERICH3Q5RHP9 1530 aa22.07■■□□□ 1.12
SERPINA1-214ENST00000556091 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
SERPINA1-214ENST00000556091 PRG4Q92954 1404 aaPredicted RBP21.91■■□□□ 1.1
SERPINA1-214ENST00000556091 JPH4Q96JJ6 628 aa21.9■■□□□ 1.1
SERPINA1-214ENST00000556091 RUSC2Q8N2Y8 1516 aa21.86■■□□□ 1.09
SERPINA1-214ENST00000556091 IGF1RP08069 1367 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms