RNA–Protein interactions for RNA: ENST00000556038.5

VASH1-205, Transcript of vasohibin 1, humanhuman

TSL 5

Gene VASH1, Length 726 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASH1-205ENST00000556038 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
VASH1-205ENST00000556038 CCDC180Q9P1Z9 1646 aa37.95■■■■□ 3.67
VASH1-205ENST00000556038 ABCC9O60706 1549 aa37.43■■■■□ 3.58
VASH1-205ENST00000556038 RB1CC1Q8TDY2 1594 aa35.87■■■■□ 3.33
VASH1-205ENST00000556038 NACADO15069 1562 aa35.81■■■■□ 3.32
VASH1-205ENST00000556038 MYO15BQ96JP2 1530 aa35.58■■■■□ 3.29
VASH1-205ENST00000556038 DCAF8L2P0C7V8 631 aa35.55■■■■□ 3.28
VASH1-205ENST00000556038 ZCCHC6Q5VYS8 1495 aaKnown RBP35.43■■■■□ 3.26
VASH1-205ENST00000556038 DCAF1Q9Y4B6 1507 aa35.29■■■■□ 3.24
VASH1-205ENST00000556038 UNC13AQ9UPW8 1703 aa35.01■■■■□ 3.19
VASH1-205ENST00000556038 PABPN1Q86U42 306 aaKnown RBP eCLIP34.94■■■■□ 3.18
VASH1-205ENST00000556038 BICRAQ9NZM4 1560 aa34.88■■■■□ 3.17
VASH1-205ENST00000556038 DNAJC5BQ9UF47 199 aa34.77■■■■□ 3.16
VASH1-205ENST00000556038 SCRIBQ14160 1630 aa34.55■■■■□ 3.12
VASH1-205ENST00000556038 SHROOM4Q9ULL8 1493 aa34.51■■■■□ 3.11
VASH1-205ENST00000556038 EIF4G1Q04637 1599 aaKnown RBP33.94■■■■□ 3.02
VASH1-205ENST00000556038 CC2D2AQ9P2K1 1620 aa33.86■■■■□ 3.01
VASH1-205ENST00000556038 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
VASH1-205ENST00000556038 NCAPD3P42695 1498 aa33.11■■■□□ 2.89
VASH1-205ENST00000556038 SMARCA4P51532 1647 aa33.07■■■□□ 2.88
VASH1-205ENST00000556038 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
VASH1-205ENST00000556038 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
VASH1-205ENST00000556038 SMARCA2P51531 1590 aa32.93■■■□□ 2.86
VASH1-205ENST00000556038 HMGXB3Q12766 1538 aa32.86■■■□□ 2.85
VASH1-205ENST00000556038 PEG3Q9GZU2 1588 aa32.84■■■□□ 2.85
VASH1-205ENST00000556038 MROH2BQ7Z745 1585 aa32.82■■■□□ 2.84
VASH1-205ENST00000556038 BAZ1BQ9UIG0 1483 aaKnown RBP32.67■■■□□ 2.82
VASH1-205ENST00000556038 WIZO95785 1651 aa32.37■■■□□ 2.77
VASH1-205ENST00000556038 RSF1Q96T23 1441 aaPredicted RBP32.35■■■□□ 2.77
VASH1-205ENST00000556038 NESP48681 1621 aa32.33■■■□□ 2.77
VASH1-205ENST00000556038 ERCC6Q03468 1493 aa32.24■■■□□ 2.75
VASH1-205ENST00000556038 LAMC3Q9Y6N6 1575 aa32.19■■■□□ 2.74
VASH1-205ENST00000556038 CUX2O14529 1486 aa32.12■■■□□ 2.73
VASH1-205ENST00000556038 CADPSQ9ULU8 1353 aa32.09■■■□□ 2.73
VASH1-205ENST00000556038 TOP2AP11388 1531 aaKnown RBP32.05■■■□□ 2.72
VASH1-205ENST00000556038 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
VASH1-205ENST00000556038 THOC2Q8NI27 1593 aaKnown RBP31.91■■■□□ 2.7
VASH1-205ENST00000556038 KIF21AQ7Z4S6 1674 aa31.86■■■□□ 2.69
VASH1-205ENST00000556038 CFTRP13569 1480 aa31.84■■■□□ 2.69
VASH1-205ENST00000556038 CCDC88BA6NC98 1476 aa31.71■■■□□ 2.67
VASH1-205ENST00000556038 MRC2Q9UBG0 1479 aa31.69■■■□□ 2.66
VASH1-205ENST00000556038 FANCD2Q9BXW9 1451 aa31.68■■■□□ 2.66
VASH1-205ENST00000556038 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
VASH1-205ENST00000556038 WDR62O43379 1518 aa31.62■■■□□ 2.65
VASH1-205ENST00000556038 DNAJC5Q9H3Z4 198 aa31.55■■■□□ 2.64
VASH1-205ENST00000556038 PRDM2Q13029 1718 aa31.41■■■□□ 2.62
VASH1-205ENST00000556038 URB2Q14146 1524 aaKnown RBP31.41■■■□□ 2.62
VASH1-205ENST00000556038 TOPBP1Q92547 1522 aa31.14■■■□□ 2.58
VASH1-205ENST00000556038 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
VASH1-205ENST00000556038 ABCC8Q09428 1581 aa31.12■■■□□ 2.57
VASH1-205ENST00000556038 DNMBPQ6XZF7 1577 aa31.06■■■□□ 2.56
VASH1-205ENST00000556038 IFT140Q96RY7 1462 aa31.03■■■□□ 2.56
VASH1-205ENST00000556038 ZNF608Q9ULD9 1512 aaPredicted RBP30.93■■■□□ 2.54
VASH1-205ENST00000556038 POLA1P09884 1462 aaPredicted RBP30.87■■■□□ 2.53
VASH1-205ENST00000556038 TARBP1Q13395 1621 aaKnown RBP30.84■■■□□ 2.53
VASH1-205ENST00000556038 CUX1P39880 1505 aa30.8■■■□□ 2.52
VASH1-205ENST00000556038 EIF4G3O43432 1585 aaKnown RBP30.73■■■□□ 2.51
VASH1-205ENST00000556038 RAD54L2Q9Y4B4 1467 aa30.72■■■□□ 2.51
VASH1-205ENST00000556038 SOGA1O94964 1423 aa30.72■■■□□ 2.51
VASH1-205ENST00000556038 FGD5Q6ZNL6 1462 aa30.71■■■□□ 2.51
VASH1-205ENST00000556038 OSCARQ8IYS5 282 aa30.71■■■□□ 2.51
VASH1-205ENST00000556038 AQRO60306 1485 aaKnown RBP eCLIP30.7■■■□□ 2.5
VASH1-205ENST00000556038 TDRD9Q8NDG6 1382 aaKnown RBP30.58■■■□□ 2.49
VASH1-205ENST00000556038 WDR97A6NE52 1622 aa30.57■■■□□ 2.48
VASH1-205ENST00000556038 ABCA10Q8WWZ4 1543 aa30.46■■■□□ 2.47
VASH1-205ENST00000556038 WRNQ14191 1432 aaPredicted RBP eCLIP30.46■■■□□ 2.47
VASH1-205ENST00000556038 TOP2BQ02880 1626 aa30.43■■■□□ 2.46
VASH1-205ENST00000556038 BIVM-ERCC5R4GMW8 1640 aa30.41■■■□□ 2.46
VASH1-205ENST00000556038 GRIN2BQ13224 1484 aa30.4■■■□□ 2.46
VASH1-205ENST00000556038 SYNJ1O43426 1573 aa30.39■■■□□ 2.46
VASH1-205ENST00000556038 SNAPC4Q5SXM2 1469 aa30.38■■■□□ 2.45
VASH1-205ENST00000556038 MAGI1Q96QZ7 1491 aaPredicted RBP30.36■■■□□ 2.45
VASH1-205ENST00000556038 GAPVD1Q14C86 1478 aa30.35■■■□□ 2.45
VASH1-205ENST00000556038 CHD1O14646 1710 aa30.35■■■□□ 2.45
VASH1-205ENST00000556038 ABCA5Q8WWZ7 1642 aa30.32■■■□□ 2.44
VASH1-205ENST00000556038 FBLN2P98095 1184 aa30.28■■■□□ 2.44
VASH1-205ENST00000556038 SYNJ2O15056 1496 aa30.25■■■□□ 2.43
VASH1-205ENST00000556038 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
VASH1-205ENST00000556038 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
VASH1-205ENST00000556038 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
VASH1-205ENST00000556038 ARHGEF11O15085 1522 aa30.22■■■□□ 2.43
VASH1-205ENST00000556038 PBRM1Q86U86 1689 aa30.21■■■□□ 2.43
VASH1-205ENST00000556038 CHMP7Q8WUX9 453 aaPredicted RBP30.21■■■□□ 2.43
VASH1-205ENST00000556038 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
VASH1-205ENST00000556038 CLASP1Q7Z460 1538 aa30.15■■■□□ 2.42
VASH1-205ENST00000556038 ERICH3Q5RHP9 1530 aa30.06■■■□□ 2.4
VASH1-205ENST00000556038 ADAMTS12P58397 1594 aa30.04■■■□□ 2.4
VASH1-205ENST00000556038 FHAD1B1AJZ9 1412 aa30.02■■■□□ 2.4
VASH1-205ENST00000556038 GRIN2AQ12879 1464 aa30■■■□□ 2.39
VASH1-205ENST00000556038 ARAP1Q96P48 1450 aa29.98■■■□□ 2.39
VASH1-205ENST00000556038 NUP160Q12769 1436 aa29.95■■■□□ 2.38
VASH1-205ENST00000556038 CYB5RLQ6IPT4 315 aa29.91■■■□□ 2.38
VASH1-205ENST00000556038 CEP170Q5SW79 1584 aa29.86■■■□□ 2.37
VASH1-205ENST00000556038 IGF1RP08069 1367 aa29.84■■■□□ 2.37
VASH1-205ENST00000556038 KIF27Q86VH2 1401 aa29.84■■■□□ 2.37
VASH1-205ENST00000556038 SHROOM2Q13796 1616 aa29.71■■■□□ 2.35
VASH1-205ENST00000556038 ERCC6L2Q5T890 1561 aa29.67■■■□□ 2.34
VASH1-205ENST00000556038 CUL7Q14999 1698 aa29.66■■■□□ 2.34
VASH1-205ENST00000556038 JPH4Q96JJ6 628 aa29.6■■■□□ 2.33
VASH1-205ENST00000556038 CARMIL1Q5VZK9 1371 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms