RNA–Protein interactions for RNA: ENST00000556019.2

LINC01588-209, Transcript of long intergenic non-protein coding RNA 1588, humanhuman

TSL 3 BASIC

Gene LINC01588, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01588-209ENST00000556019 NISCHQ9Y2I1 1504 aa26.91■■□□□ 1.9
LINC01588-209ENST00000556019 ABCC9O60706 1549 aa24.51■■□□□ 1.51
LINC01588-209ENST00000556019 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
LINC01588-209ENST00000556019 DNAJC5BQ9UF47 199 aa23.32■■□□□ 1.32
LINC01588-209ENST00000556019 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
LINC01588-209ENST00000556019 NACADO15069 1562 aa22.97■■□□□ 1.27
LINC01588-209ENST00000556019 PABPN1Q86U42 306 aaKnown RBP eCLIP22.78■■□□□ 1.24
LINC01588-209ENST00000556019 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
LINC01588-209ENST00000556019 DCAF8L2P0C7V8 631 aa22.71■■□□□ 1.23
LINC01588-209ENST00000556019 BICRAQ9NZM4 1560 aa22.63■■□□□ 1.21
LINC01588-209ENST00000556019 MYO15BQ96JP2 1530 aa22.58■■□□□ 1.21
LINC01588-209ENST00000556019 ZCCHC6Q5VYS8 1495 aaKnown RBP22.26■■□□□ 1.15
LINC01588-209ENST00000556019 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
LINC01588-209ENST00000556019 SHROOM4Q9ULL8 1493 aa22.18■■□□□ 1.14
LINC01588-209ENST00000556019 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
LINC01588-209ENST00000556019 CECR2Q9BXF3 1484 aa22.09■■□□□ 1.13
LINC01588-209ENST00000556019 SCRIBQ14160 1630 aa22.09■■□□□ 1.13
LINC01588-209ENST00000556019 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
LINC01588-209ENST00000556019 DNAJC5Q9H3Z4 198 aa21.52■■□□□ 1.04
LINC01588-209ENST00000556019 NCAPD3P42695 1498 aa21.24■□□□□ 0.99
LINC01588-209ENST00000556019 CUX2O14529 1486 aa21.2■□□□□ 0.98
LINC01588-209ENST00000556019 ATAD2BQ9ULI0 1458 aa21.14■□□□□ 0.98
LINC01588-209ENST00000556019 ERCC6Q03468 1493 aa21.11■□□□□ 0.97
LINC01588-209ENST00000556019 SMARCA4P51532 1647 aa21.05■□□□□ 0.96
LINC01588-209ENST00000556019 HMGXB3Q12766 1538 aa21.04■□□□□ 0.96
LINC01588-209ENST00000556019 NESP48681 1621 aa21.03■□□□□ 0.96
LINC01588-209ENST00000556019 SMARCA2P51531 1590 aa21.02■□□□□ 0.95
LINC01588-209ENST00000556019 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
LINC01588-209ENST00000556019 THOC2Q8NI27 1593 aaKnown RBP20.87■□□□□ 0.93
LINC01588-209ENST00000556019 PEG3Q9GZU2 1588 aa20.87■□□□□ 0.93
LINC01588-209ENST00000556019 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
LINC01588-209ENST00000556019 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
LINC01588-209ENST00000556019 MROH2BQ7Z745 1585 aa20.76■□□□□ 0.91
LINC01588-209ENST00000556019 KIF21AQ7Z4S6 1674 aa20.73■□□□□ 0.91
LINC01588-209ENST00000556019 PDS5BQ9NTI5 1447 aa20.62■□□□□ 0.89
LINC01588-209ENST00000556019 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
LINC01588-209ENST00000556019 MRC2Q9UBG0 1479 aa20.5■□□□□ 0.87
LINC01588-209ENST00000556019 WIZO95785 1651 aa20.5■□□□□ 0.87
LINC01588-209ENST00000556019 WDR62O43379 1518 aa20.49■□□□□ 0.87
LINC01588-209ENST00000556019 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
LINC01588-209ENST00000556019 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
LINC01588-209ENST00000556019 FANCD2Q9BXW9 1451 aa20.33■□□□□ 0.85
LINC01588-209ENST00000556019 CFTRP13569 1480 aa20.29■□□□□ 0.84
LINC01588-209ENST00000556019 URB2Q14146 1524 aaKnown RBP20.23■□□□□ 0.83
LINC01588-209ENST00000556019 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
LINC01588-209ENST00000556019 TOP2AP11388 1531 aaKnown RBP20.18■□□□□ 0.82
LINC01588-209ENST00000556019 OSCARQ8IYS5 282 aa20.16■□□□□ 0.82
LINC01588-209ENST00000556019 PRDM2Q13029 1718 aa20.05■□□□□ 0.8
LINC01588-209ENST00000556019 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
LINC01588-209ENST00000556019 RIMBP3CA6NJZ7 1639 aa20.01■□□□□ 0.79
LINC01588-209ENST00000556019 RIMBP3BA6NNM3 1639 aa20.01■□□□□ 0.79
LINC01588-209ENST00000556019 RIMBP3Q9UFD9 1639 aa20.01■□□□□ 0.79
LINC01588-209ENST00000556019 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
LINC01588-209ENST00000556019 IFT140Q96RY7 1462 aa19.96■□□□□ 0.79
LINC01588-209ENST00000556019 TOPBP1Q92547 1522 aa19.92■□□□□ 0.78
LINC01588-209ENST00000556019 ARHGEF11O15085 1522 aa19.91■□□□□ 0.78
LINC01588-209ENST00000556019 EIF4G3O43432 1585 aaKnown RBP19.87■□□□□ 0.77
LINC01588-209ENST00000556019 DNMBPQ6XZF7 1577 aa19.82■□□□□ 0.76
LINC01588-209ENST00000556019 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
LINC01588-209ENST00000556019 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
LINC01588-209ENST00000556019 CHD1O14646 1710 aa19.78■□□□□ 0.76
LINC01588-209ENST00000556019 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.76
LINC01588-209ENST00000556019 CYB5RLQ6IPT4 315 aa19.72■□□□□ 0.75
LINC01588-209ENST00000556019 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
LINC01588-209ENST00000556019 ARAP1Q96P48 1450 aa19.72■□□□□ 0.75
LINC01588-209ENST00000556019 RAD54L2Q9Y4B4 1467 aa19.66■□□□□ 0.74
LINC01588-209ENST00000556019 TDRD9Q8NDG6 1382 aaKnown RBP19.6■□□□□ 0.73
LINC01588-209ENST00000556019 FBLN2P98095 1184 aa19.6■□□□□ 0.73
LINC01588-209ENST00000556019 SOGA1O94964 1423 aa19.58■□□□□ 0.72
LINC01588-209ENST00000556019 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
LINC01588-209ENST00000556019 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
LINC01588-209ENST00000556019 FGD5Q6ZNL6 1462 aa19.54■□□□□ 0.72
LINC01588-209ENST00000556019 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
LINC01588-209ENST00000556019 CUX1P39880 1505 aa19.52■□□□□ 0.72
LINC01588-209ENST00000556019 WDR97A6NE52 1622 aa19.51■□□□□ 0.71
LINC01588-209ENST00000556019 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
LINC01588-209ENST00000556019 SYNJ1O43426 1573 aa19.44■□□□□ 0.7
LINC01588-209ENST00000556019 GRIN2BQ13224 1484 aa19.44■□□□□ 0.7
LINC01588-209ENST00000556019 SYNJ2O15056 1496 aa19.42■□□□□ 0.7
LINC01588-209ENST00000556019 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
LINC01588-209ENST00000556019 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
LINC01588-209ENST00000556019 GAPVD1Q14C86 1478 aa19.34■□□□□ 0.69
LINC01588-209ENST00000556019 ABCA5Q8WWZ7 1642 aa19.33■□□□□ 0.69
LINC01588-209ENST00000556019 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
LINC01588-209ENST00000556019 ERCC6L2Q5T890 1561 aa19.27■□□□□ 0.68
LINC01588-209ENST00000556019 GRIN2AQ12879 1464 aa19.21■□□□□ 0.67
LINC01588-209ENST00000556019 CEP170Q5SW79 1584 aa19.19■□□□□ 0.66
LINC01588-209ENST00000556019 ADAMTS12P58397 1594 aa19.19■□□□□ 0.66
LINC01588-209ENST00000556019 NUP160Q12769 1436 aa19.17■□□□□ 0.66
LINC01588-209ENST00000556019 SHROOM2Q13796 1616 aa19.14■□□□□ 0.66
LINC01588-209ENST00000556019 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
LINC01588-209ENST00000556019 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
LINC01588-209ENST00000556019 AEBP2Q6ZN18 517 aaPredicted RBP19.11■□□□□ 0.65
LINC01588-209ENST00000556019 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
LINC01588-209ENST00000556019 FHAD1B1AJZ9 1412 aa19.08■□□□□ 0.64
LINC01588-209ENST00000556019 SUPT5HO00267 1087 aaKnown RBP19.04■□□□□ 0.64
LINC01588-209ENST00000556019 KIF13AQ9H1H9 1805 aa19.04■□□□□ 0.64
LINC01588-209ENST00000556019 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
LINC01588-209ENST00000556019 PRG4Q92954 1404 aaPredicted RBP18.98■□□□□ 0.63
LINC01588-209ENST00000556019 JPH4Q96JJ6 628 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms