RNA–Protein interactions for RNA: ENST00000555960.5

ATL1-207, Transcript of atlastin GTPase 1, humanhuman

TSL 5

Gene ATL1, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-207ENST00000555960 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
ATL1-207ENST00000555960 CCDC180Q9P1Z9 1646 aa28.29■■■□□ 2.12
ATL1-207ENST00000555960 ABCC9O60706 1549 aa27.88■■■□□ 2.05
ATL1-207ENST00000555960 RB1CC1Q8TDY2 1594 aa26.71■■□□□ 1.87
ATL1-207ENST00000555960 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
ATL1-207ENST00000555960 NACADO15069 1562 aa26.67■■□□□ 1.86
ATL1-207ENST00000555960 ZCCHC6Q5VYS8 1495 aaKnown RBP26.49■■□□□ 1.83
ATL1-207ENST00000555960 MYO15BQ96JP2 1530 aa26.46■■□□□ 1.83
ATL1-207ENST00000555960 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
ATL1-207ENST00000555960 PABPN1Q86U42 306 aaKnown RBP eCLIP26.08■■□□□ 1.77
ATL1-207ENST00000555960 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
ATL1-207ENST00000555960 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
ATL1-207ENST00000555960 SCRIBQ14160 1630 aa25.84■■□□□ 1.73
ATL1-207ENST00000555960 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
ATL1-207ENST00000555960 SHROOM4Q9ULL8 1493 aa25.6■■□□□ 1.69
ATL1-207ENST00000555960 EIF4G1Q04637 1599 aaKnown RBP25.26■■□□□ 1.63
ATL1-207ENST00000555960 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
ATL1-207ENST00000555960 CECR2Q9BXF3 1484 aa25.06■■□□□ 1.6
ATL1-207ENST00000555960 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
ATL1-207ENST00000555960 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
ATL1-207ENST00000555960 NCAPD3P42695 1498 aa24.64■■□□□ 1.54
ATL1-207ENST00000555960 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.54
ATL1-207ENST00000555960 SMARCA2P51531 1590 aa24.56■■□□□ 1.52
ATL1-207ENST00000555960 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
ATL1-207ENST00000555960 HMGXB3Q12766 1538 aa24.47■■□□□ 1.51
ATL1-207ENST00000555960 PEG3Q9GZU2 1588 aa24.46■■□□□ 1.51
ATL1-207ENST00000555960 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
ATL1-207ENST00000555960 WIZO95785 1651 aa24.25■■□□□ 1.47
ATL1-207ENST00000555960 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
ATL1-207ENST00000555960 NESP48681 1621 aa24.1■■□□□ 1.45
ATL1-207ENST00000555960 ERCC6Q03468 1493 aa24.01■■□□□ 1.43
ATL1-207ENST00000555960 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
ATL1-207ENST00000555960 LAMC3Q9Y6N6 1575 aa23.97■■□□□ 1.43
ATL1-207ENST00000555960 CADPSQ9ULU8 1353 aa23.92■■□□□ 1.42
ATL1-207ENST00000555960 PDS5BQ9NTI5 1447 aa23.84■■□□□ 1.41
ATL1-207ENST00000555960 CUX2O14529 1486 aa23.8■■□□□ 1.4
ATL1-207ENST00000555960 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
ATL1-207ENST00000555960 CFTRP13569 1480 aa23.75■■□□□ 1.39
ATL1-207ENST00000555960 CCDC88BA6NC98 1476 aa23.74■■□□□ 1.39
ATL1-207ENST00000555960 THOC2Q8NI27 1593 aaKnown RBP23.71■■□□□ 1.39
ATL1-207ENST00000555960 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
ATL1-207ENST00000555960 MRC2Q9UBG0 1479 aa23.6■■□□□ 1.37
ATL1-207ENST00000555960 CEP164Q9UPV0 1460 aa23.6■■□□□ 1.37
ATL1-207ENST00000555960 SUPT5HO00267 1087 aaKnown RBP23.56■■□□□ 1.36
ATL1-207ENST00000555960 WDR62O43379 1518 aa23.51■■□□□ 1.35
ATL1-207ENST00000555960 PRDM2Q13029 1718 aa23.45■■□□□ 1.34
ATL1-207ENST00000555960 URB2Q14146 1524 aaKnown RBP23.41■■□□□ 1.34
ATL1-207ENST00000555960 DNAJC5Q9H3Z4 198 aa23.28■■□□□ 1.32
ATL1-207ENST00000555960 TOPBP1Q92547 1522 aa23.24■■□□□ 1.31
ATL1-207ENST00000555960 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
ATL1-207ENST00000555960 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
ATL1-207ENST00000555960 IFT140Q96RY7 1462 aa23.11■■□□□ 1.29
ATL1-207ENST00000555960 ZNF608Q9ULD9 1512 aaPredicted RBP23.05■■□□□ 1.28
ATL1-207ENST00000555960 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
ATL1-207ENST00000555960 CUX1P39880 1505 aa23.03■■□□□ 1.28
ATL1-207ENST00000555960 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
ATL1-207ENST00000555960 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
ATL1-207ENST00000555960 RAD54L2Q9Y4B4 1467 aa22.97■■□□□ 1.27
ATL1-207ENST00000555960 SOGA1O94964 1423 aa22.96■■□□□ 1.27
ATL1-207ENST00000555960 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
ATL1-207ENST00000555960 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
ATL1-207ENST00000555960 TDRD9Q8NDG6 1382 aaKnown RBP22.87■■□□□ 1.25
ATL1-207ENST00000555960 OSCARQ8IYS5 282 aa22.84■■□□□ 1.25
ATL1-207ENST00000555960 WRNQ14191 1432 aaPredicted RBP eCLIP22.83■■□□□ 1.25
ATL1-207ENST00000555960 SYNJ1O43426 1573 aa22.77■■□□□ 1.24
ATL1-207ENST00000555960 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
ATL1-207ENST00000555960 BIVM-ERCC5R4GMW8 1640 aa22.75■■□□□ 1.23
ATL1-207ENST00000555960 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
ATL1-207ENST00000555960 ABCA10Q8WWZ4 1543 aa22.73■■□□□ 1.23
ATL1-207ENST00000555960 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
ATL1-207ENST00000555960 FBLN2P98095 1184 aa22.68■■□□□ 1.22
ATL1-207ENST00000555960 GAPVD1Q14C86 1478 aa22.67■■□□□ 1.22
ATL1-207ENST00000555960 SNAPC4Q5SXM2 1469 aa22.66■■□□□ 1.22
ATL1-207ENST00000555960 ABCA5Q8WWZ7 1642 aa22.63■■□□□ 1.21
ATL1-207ENST00000555960 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
ATL1-207ENST00000555960 CHD1O14646 1710 aa22.62■■□□□ 1.21
ATL1-207ENST00000555960 CHMP7Q8WUX9 453 aaPredicted RBP22.58■■□□□ 1.21
ATL1-207ENST00000555960 PBRM1Q86U86 1689 aa22.58■■□□□ 1.2
ATL1-207ENST00000555960 SYNJ2O15056 1496 aa22.54■■□□□ 1.2
ATL1-207ENST00000555960 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
ATL1-207ENST00000555960 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
ATL1-207ENST00000555960 ERICH3Q5RHP9 1530 aa22.44■■□□□ 1.18
ATL1-207ENST00000555960 RIMBP3CA6NJZ7 1639 aa22.43■■□□□ 1.18
ATL1-207ENST00000555960 RIMBP3BA6NNM3 1639 aa22.43■■□□□ 1.18
ATL1-207ENST00000555960 RIMBP3Q9UFD9 1639 aa22.43■■□□□ 1.18
ATL1-207ENST00000555960 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
ATL1-207ENST00000555960 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
ATL1-207ENST00000555960 FHAD1B1AJZ9 1412 aa22.4■■□□□ 1.18
ATL1-207ENST00000555960 GRIN2AQ12879 1464 aa22.39■■□□□ 1.17
ATL1-207ENST00000555960 KIF27Q86VH2 1401 aa22.36■■□□□ 1.17
ATL1-207ENST00000555960 IGF1RP08069 1367 aa22.33■■□□□ 1.17
ATL1-207ENST00000555960 NUP160Q12769 1436 aa22.31■■□□□ 1.16
ATL1-207ENST00000555960 CYB5RLQ6IPT4 315 aa22.29■■□□□ 1.16
ATL1-207ENST00000555960 CEP170Q5SW79 1584 aa22.28■■□□□ 1.16
ATL1-207ENST00000555960 ARAP1Q96P48 1450 aa22.26■■□□□ 1.15
ATL1-207ENST00000555960 CARMIL1Q5VZK9 1371 aa22.18■■□□□ 1.14
ATL1-207ENST00000555960 CUL7Q14999 1698 aa22.17■■□□□ 1.14
ATL1-207ENST00000555960 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
ATL1-207ENST00000555960 SHROOM2Q13796 1616 aa22.12■■□□□ 1.13
ATL1-207ENST00000555960 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms