RNA–Protein interactions for RNA: ENST00000555887.5

PSMC6-211, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-211ENST00000555887 AEBP2Q6ZN18 517 aaPredicted RBP18.94■□□□□ 0.62
PSMC6-211ENST00000555887 NISCHQ9Y2I1 1504 aa18.21■□□□□ 0.51
PSMC6-211ENST00000555887 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
PSMC6-211ENST00000555887 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
PSMC6-211ENST00000555887 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
PSMC6-211ENST00000555887 ABCC9O60706 1549 aa16.04■□□□□ 0.16
PSMC6-211ENST00000555887 PHF23Q9BUL5 403 aaPredicted RBP16.01■□□□□ 0.15
PSMC6-211ENST00000555887 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
PSMC6-211ENST00000555887 NACADO15069 1562 aa15.45■□□□□ 0.06
PSMC6-211ENST00000555887 MYO15BQ96JP2 1530 aa15.35■□□□□ 0.05
PSMC6-211ENST00000555887 DCAF8L2P0C7V8 631 aa15.35■□□□□ 0.05
PSMC6-211ENST00000555887 FOXD1Q16676 465 aa15.2■□□□□ 0.02
PSMC6-211ENST00000555887 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
PSMC6-211ENST00000555887 ZCCHC6Q5VYS8 1495 aaKnown RBP15.11■□□□□ 0.01
PSMC6-211ENST00000555887 SHROOM4Q9ULL8 1493 aa14.98□□□□□ -0.01
PSMC6-211ENST00000555887 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
PSMC6-211ENST00000555887 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
PSMC6-211ENST00000555887 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
PSMC6-211ENST00000555887 BICRAQ9NZM4 1560 aa14.82□□□□□ -0.04
PSMC6-211ENST00000555887 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
PSMC6-211ENST00000555887 SCRIBQ14160 1630 aa14.72□□□□□ -0.05
PSMC6-211ENST00000555887 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
PSMC6-211ENST00000555887 CECR2Q9BXF3 1484 aa14.51□□□□□ -0.09
PSMC6-211ENST00000555887 MSH5O43196 834 aa14.5□□□□□ -0.09
PSMC6-211ENST00000555887 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
PSMC6-211ENST00000555887 NCAPD3P42695 1498 aa14.24□□□□□ -0.13
PSMC6-211ENST00000555887 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
PSMC6-211ENST00000555887 BAZ1AQ9NRL2 1556 aaPredicted RBP14.19□□□□□ -0.14
PSMC6-211ENST00000555887 ATAD2BQ9ULI0 1458 aa14.15□□□□□ -0.14
PSMC6-211ENST00000555887 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
PSMC6-211ENST00000555887 HMGXB3Q12766 1538 aa14.12□□□□□ -0.15
PSMC6-211ENST00000555887 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
PSMC6-211ENST00000555887 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
PSMC6-211ENST00000555887 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
PSMC6-211ENST00000555887 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
PSMC6-211ENST00000555887 CUX2O14529 1486 aa13.93□□□□□ -0.18
PSMC6-211ENST00000555887 MROH2BQ7Z745 1585 aa13.93□□□□□ -0.18
PSMC6-211ENST00000555887 PDS5BQ9NTI5 1447 aa13.9□□□□□ -0.19
PSMC6-211ENST00000555887 PLPPR3Q6T4P5 718 aa13.89□□□□□ -0.19
PSMC6-211ENST00000555887 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
PSMC6-211ENST00000555887 PPP6R1Q9UPN7 881 aa13.83□□□□□ -0.2
PSMC6-211ENST00000555887 CADPSQ9ULU8 1353 aa13.83□□□□□ -0.2
PSMC6-211ENST00000555887 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
PSMC6-211ENST00000555887 NESP48681 1621 aa13.75□□□□□ -0.21
PSMC6-211ENST00000555887 ADRA2BP18089 450 aa13.74□□□□□ -0.21
PSMC6-211ENST00000555887 WIZO95785 1651 aa13.73□□□□□ -0.21
PSMC6-211ENST00000555887 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
PSMC6-211ENST00000555887 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
PSMC6-211ENST00000555887 CFTRP13569 1480 aa13.67□□□□□ -0.22
PSMC6-211ENST00000555887 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
PSMC6-211ENST00000555887 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
PSMC6-211ENST00000555887 THOC2Q8NI27 1593 aaKnown RBP13.61□□□□□ -0.23
PSMC6-211ENST00000555887 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
PSMC6-211ENST00000555887 WDR62O43379 1518 aa13.56□□□□□ -0.24
PSMC6-211ENST00000555887 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
PSMC6-211ENST00000555887 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
PSMC6-211ENST00000555887 ABCC8Q09428 1581 aa13.53□□□□□ -0.24
PSMC6-211ENST00000555887 CCDC88BA6NC98 1476 aa13.52□□□□□ -0.25
PSMC6-211ENST00000555887 PRDM2Q13029 1718 aa13.43□□□□□ -0.26
PSMC6-211ENST00000555887 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
PSMC6-211ENST00000555887 OSCARQ8IYS5 282 aa13.39□□□□□ -0.27
PSMC6-211ENST00000555887 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
PSMC6-211ENST00000555887 TOPBP1Q92547 1522 aa13.34□□□□□ -0.27
PSMC6-211ENST00000555887 DNMBPQ6XZF7 1577 aa13.32□□□□□ -0.28
PSMC6-211ENST00000555887 WDR97A6NE52 1622 aa13.24□□□□□ -0.29
PSMC6-211ENST00000555887 SOGA1O94964 1423 aa13.22□□□□□ -0.29
PSMC6-211ENST00000555887 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
PSMC6-211ENST00000555887 ZNF608Q9ULD9 1512 aaPredicted RBP13.17□□□□□ -0.3
PSMC6-211ENST00000555887 TARBP1Q13395 1621 aaKnown RBP13.14□□□□□ -0.31
PSMC6-211ENST00000555887 EIF4G3O43432 1585 aaKnown RBP13.13□□□□□ -0.31
PSMC6-211ENST00000555887 AQRO60306 1485 aaKnown RBP eCLIP13.13□□□□□ -0.31
PSMC6-211ENST00000555887 FGD5Q6ZNL6 1462 aa13.13□□□□□ -0.31
PSMC6-211ENST00000555887 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
PSMC6-211ENST00000555887 FBLN2P98095 1184 aa13.12□□□□□ -0.31
PSMC6-211ENST00000555887 CHMP7Q8WUX9 453 aaPredicted RBP13.12□□□□□ -0.31
PSMC6-211ENST00000555887 GRIN2BQ13224 1484 aa13.11□□□□□ -0.31
PSMC6-211ENST00000555887 MAGI1Q96QZ7 1491 aaPredicted RBP13.11□□□□□ -0.31
PSMC6-211ENST00000555887 TDRD9Q8NDG6 1382 aaKnown RBP13.1□□□□□ -0.31
PSMC6-211ENST00000555887 TRIM41Q8WV44 630 aa13.1□□□□□ -0.31
PSMC6-211ENST00000555887 CUX1P39880 1505 aa13.09□□□□□ -0.31
PSMC6-211ENST00000555887 RAD54L2Q9Y4B4 1467 aa13.08□□□□□ -0.32
PSMC6-211ENST00000555887 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
PSMC6-211ENST00000555887 GAPVD1Q14C86 1478 aa13.05□□□□□ -0.32
PSMC6-211ENST00000555887 SYNJ2O15056 1496 aa13.03□□□□□ -0.32
PSMC6-211ENST00000555887 SNAPC4Q5SXM2 1469 aa13.02□□□□□ -0.33
PSMC6-211ENST00000555887 SYNJ1O43426 1573 aa13.02□□□□□ -0.33
PSMC6-211ENST00000555887 TOP2BQ02880 1626 aa13□□□□□ -0.33
PSMC6-211ENST00000555887 ARHGEF11O15085 1522 aa12.99□□□□□ -0.33
PSMC6-211ENST00000555887 BIVM-ERCC5R4GMW8 1640 aa12.96□□□□□ -0.33
PSMC6-211ENST00000555887 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
PSMC6-211ENST00000555887 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
PSMC6-211ENST00000555887 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
PSMC6-211ENST00000555887 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
PSMC6-211ENST00000555887 CHD1O14646 1710 aa12.94□□□□□ -0.34
PSMC6-211ENST00000555887 FHAD1B1AJZ9 1412 aa12.94□□□□□ -0.34
PSMC6-211ENST00000555887 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
PSMC6-211ENST00000555887 ABCA5Q8WWZ7 1642 aa12.92□□□□□ -0.34
PSMC6-211ENST00000555887 PBRM1Q86U86 1689 aa12.89□□□□□ -0.35
PSMC6-211ENST00000555887 KIF27Q86VH2 1401 aa12.88□□□□□ -0.35
PSMC6-211ENST00000555887 CLASP1Q7Z460 1538 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms