RNA–Protein interactions for RNA: ENST00000555838.1

AL355076.3-201, humanhuman

BASIC

Gene AL355076.3, Length 587 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355076.3-201ENST00000555838 NISCHQ9Y2I1 1504 aa19.48■□□□□ 0.71
AL355076.3-201ENST00000555838 ABCC9O60706 1549 aa17.42■□□□□ 0.38
AL355076.3-201ENST00000555838 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
AL355076.3-201ENST00000555838 DCAF8L2P0C7V8 631 aa16.57■□□□□ 0.24
AL355076.3-201ENST00000555838 RB1CC1Q8TDY2 1594 aa16.51■□□□□ 0.23
AL355076.3-201ENST00000555838 NACADO15069 1562 aa16.43■□□□□ 0.22
AL355076.3-201ENST00000555838 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
AL355076.3-201ENST00000555838 PABPN1Q86U42 306 aaKnown RBP eCLIP16.33■□□□□ 0.2
AL355076.3-201ENST00000555838 MYO15BQ96JP2 1530 aa16.2■□□□□ 0.18
AL355076.3-201ENST00000555838 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
AL355076.3-201ENST00000555838 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
AL355076.3-201ENST00000555838 BICRAQ9NZM4 1560 aa16.09■□□□□ 0.17
AL355076.3-201ENST00000555838 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
AL355076.3-201ENST00000555838 SCRIBQ14160 1630 aa15.89■□□□□ 0.13
AL355076.3-201ENST00000555838 SHROOM4Q9ULL8 1493 aa15.74■□□□□ 0.11
AL355076.3-201ENST00000555838 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
AL355076.3-201ENST00000555838 EIF4G1Q04637 1599 aaKnown RBP15.66■□□□□ 0.1
AL355076.3-201ENST00000555838 CECR2Q9BXF3 1484 aa15.65■□□□□ 0.1
AL355076.3-201ENST00000555838 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
AL355076.3-201ENST00000555838 ATAD2BQ9ULI0 1458 aa15.2■□□□□ 0.02
AL355076.3-201ENST00000555838 SMARCA4P51532 1647 aa15.14■□□□□ 0.01
AL355076.3-201ENST00000555838 SMARCA2P51531 1590 aa15.08■□□□□ 0
AL355076.3-201ENST00000555838 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
AL355076.3-201ENST00000555838 MROH2BQ7Z745 1585 aa15.05■□□□□ -0
AL355076.3-201ENST00000555838 HMGXB3Q12766 1538 aa15.03■□□□□ -0
AL355076.3-201ENST00000555838 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
AL355076.3-201ENST00000555838 NESP48681 1621 aa15□□□□□ -0.01
AL355076.3-201ENST00000555838 PEG3Q9GZU2 1588 aa14.98□□□□□ -0.01
AL355076.3-201ENST00000555838 ERCC6Q03468 1493 aa14.97□□□□□ -0.01
AL355076.3-201ENST00000555838 DNAJC5Q9H3Z4 198 aa14.95□□□□□ -0.02
AL355076.3-201ENST00000555838 CUX2O14529 1486 aa14.89□□□□□ -0.03
AL355076.3-201ENST00000555838 WIZO95785 1651 aa14.85□□□□□ -0.03
AL355076.3-201ENST00000555838 LAMC3Q9Y6N6 1575 aa14.8□□□□□ -0.04
AL355076.3-201ENST00000555838 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
AL355076.3-201ENST00000555838 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
AL355076.3-201ENST00000555838 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
AL355076.3-201ENST00000555838 THOC2Q8NI27 1593 aaKnown RBP14.73□□□□□ -0.05
AL355076.3-201ENST00000555838 KIF21AQ7Z4S6 1674 aa14.72□□□□□ -0.05
AL355076.3-201ENST00000555838 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
AL355076.3-201ENST00000555838 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
AL355076.3-201ENST00000555838 CFTRP13569 1480 aa14.6□□□□□ -0.07
AL355076.3-201ENST00000555838 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
AL355076.3-201ENST00000555838 CEP164Q9UPV0 1460 aa14.56□□□□□ -0.08
AL355076.3-201ENST00000555838 WDR62O43379 1518 aa14.56□□□□□ -0.08
AL355076.3-201ENST00000555838 CCDC88BA6NC98 1476 aa14.54□□□□□ -0.08
AL355076.3-201ENST00000555838 URB2Q14146 1524 aaKnown RBP14.48□□□□□ -0.09
AL355076.3-201ENST00000555838 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
AL355076.3-201ENST00000555838 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
AL355076.3-201ENST00000555838 TRIM41Q8WV44 630 aa14.33□□□□□ -0.12
AL355076.3-201ENST00000555838 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
AL355076.3-201ENST00000555838 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
AL355076.3-201ENST00000555838 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
AL355076.3-201ENST00000555838 SUPT5HO00267 1087 aaKnown RBP14.27□□□□□ -0.13
AL355076.3-201ENST00000555838 ABCC8Q09428 1581 aa14.25□□□□□ -0.13
AL355076.3-201ENST00000555838 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
AL355076.3-201ENST00000555838 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.13
AL355076.3-201ENST00000555838 RAD54L2Q9Y4B4 1467 aa14.18□□□□□ -0.14
AL355076.3-201ENST00000555838 POLA1P09884 1462 aaPredicted RBP14.18□□□□□ -0.14
AL355076.3-201ENST00000555838 TARBP1Q13395 1621 aaKnown RBP14.17□□□□□ -0.14
AL355076.3-201ENST00000555838 SOGA1O94964 1423 aa14.15□□□□□ -0.14
AL355076.3-201ENST00000555838 TDRD9Q8NDG6 1382 aaKnown RBP14.15□□□□□ -0.14
AL355076.3-201ENST00000555838 EIF4G3O43432 1585 aaKnown RBP14.13□□□□□ -0.15
AL355076.3-201ENST00000555838 FBLN2P98095 1184 aa14.13□□□□□ -0.15
AL355076.3-201ENST00000555838 CUX1P39880 1505 aa14.1□□□□□ -0.15
AL355076.3-201ENST00000555838 FGD5Q6ZNL6 1462 aa14.1□□□□□ -0.15
AL355076.3-201ENST00000555838 RIMBP3CA6NJZ7 1639 aa14.07□□□□□ -0.16
AL355076.3-201ENST00000555838 RIMBP3BA6NNM3 1639 aa14.07□□□□□ -0.16
AL355076.3-201ENST00000555838 RIMBP3Q9UFD9 1639 aa14.07□□□□□ -0.16
AL355076.3-201ENST00000555838 CYB5RLQ6IPT4 315 aa14.05□□□□□ -0.16
AL355076.3-201ENST00000555838 CHD1O14646 1710 aa14.04□□□□□ -0.16
AL355076.3-201ENST00000555838 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
AL355076.3-201ENST00000555838 CHMP7Q8WUX9 453 aaPredicted RBP14.02□□□□□ -0.17
AL355076.3-201ENST00000555838 SNAPC4Q5SXM2 1469 aa14□□□□□ -0.17
AL355076.3-201ENST00000555838 GRIN2BQ13224 1484 aa13.97□□□□□ -0.17
AL355076.3-201ENST00000555838 GAPVD1Q14C86 1478 aa13.95□□□□□ -0.18
AL355076.3-201ENST00000555838 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
AL355076.3-201ENST00000555838 ABCA10Q8WWZ4 1543 aa13.93□□□□□ -0.18
AL355076.3-201ENST00000555838 MAGI1Q96QZ7 1491 aaPredicted RBP13.93□□□□□ -0.18
AL355076.3-201ENST00000555838 ARAP1Q96P48 1450 aa13.92□□□□□ -0.18
AL355076.3-201ENST00000555838 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
AL355076.3-201ENST00000555838 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
AL355076.3-201ENST00000555838 CLASP1Q7Z460 1538 aa13.89□□□□□ -0.19
AL355076.3-201ENST00000555838 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
AL355076.3-201ENST00000555838 ABCA5Q8WWZ7 1642 aa13.86□□□□□ -0.19
AL355076.3-201ENST00000555838 PBRM1Q86U86 1689 aa13.86□□□□□ -0.19
AL355076.3-201ENST00000555838 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
AL355076.3-201ENST00000555838 BIVM-ERCC5R4GMW8 1640 aa13.84□□□□□ -0.19
AL355076.3-201ENST00000555838 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
AL355076.3-201ENST00000555838 GRIN2AQ12879 1464 aa13.79□□□□□ -0.2
AL355076.3-201ENST00000555838 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
AL355076.3-201ENST00000555838 ERCC6L2Q5T890 1561 aa13.75□□□□□ -0.21
AL355076.3-201ENST00000555838 NUP160Q12769 1436 aa13.75□□□□□ -0.21
AL355076.3-201ENST00000555838 ADAMTS12P58397 1594 aa13.75□□□□□ -0.21
AL355076.3-201ENST00000555838 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
AL355076.3-201ENST00000555838 ERICH3Q5RHP9 1530 aa13.73□□□□□ -0.21
AL355076.3-201ENST00000555838 JPH4Q96JJ6 628 aa13.71□□□□□ -0.21
AL355076.3-201ENST00000555838 IGF1RP08069 1367 aa13.7□□□□□ -0.22
AL355076.3-201ENST00000555838 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
AL355076.3-201ENST00000555838 SHROOM2Q13796 1616 aa13.64□□□□□ -0.23
AL355076.3-201ENST00000555838 KIF27Q86VH2 1401 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms