RNA–Protein interactions for RNA: ENST00000555809.1

ITGA7-214, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-214ENST00000555809 NISCHQ9Y2I1 1504 aa38.19■■■■□ 3.7
ITGA7-214ENST00000555809 CCDC180Q9P1Z9 1646 aa34.16■■■■□ 3.06
ITGA7-214ENST00000555809 ABCC9O60706 1549 aa34.11■■■■□ 3.05
ITGA7-214ENST00000555809 RB1CC1Q8TDY2 1594 aa32.54■■■□□ 2.8
ITGA7-214ENST00000555809 DCAF8L2P0C7V8 631 aa32.42■■■□□ 2.78
ITGA7-214ENST00000555809 NACADO15069 1562 aa32.34■■■□□ 2.77
ITGA7-214ENST00000555809 MYO15BQ96JP2 1530 aa31.92■■■□□ 2.7
ITGA7-214ENST00000555809 PABPN1Q86U42 306 aaKnown RBP eCLIP31.84■■■□□ 2.69
ITGA7-214ENST00000555809 DNAJC5BQ9UF47 199 aa31.83■■■□□ 2.69
ITGA7-214ENST00000555809 ZCCHC6Q5VYS8 1495 aaKnown RBP31.64■■■□□ 2.66
ITGA7-214ENST00000555809 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
ITGA7-214ENST00000555809 DCAF1Q9Y4B6 1507 aa31.54■■■□□ 2.64
ITGA7-214ENST00000555809 BICRAQ9NZM4 1560 aa31.44■■■□□ 2.62
ITGA7-214ENST00000555809 SHROOM4Q9ULL8 1493 aa31.18■■■□□ 2.58
ITGA7-214ENST00000555809 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
ITGA7-214ENST00000555809 CC2D2AQ9P2K1 1620 aa30.77■■■□□ 2.52
ITGA7-214ENST00000555809 EIF4G1Q04637 1599 aaKnown RBP30.75■■■□□ 2.51
ITGA7-214ENST00000555809 CECR2Q9BXF3 1484 aa30.74■■■□□ 2.51
ITGA7-214ENST00000555809 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
ITGA7-214ENST00000555809 ATAD2BQ9ULI0 1458 aa29.77■■■□□ 2.36
ITGA7-214ENST00000555809 SMARCA2P51531 1590 aa29.73■■■□□ 2.35
ITGA7-214ENST00000555809 SMARCA4P51532 1647 aa29.72■■■□□ 2.35
ITGA7-214ENST00000555809 BAZ1AQ9NRL2 1556 aaPredicted RBP29.67■■■□□ 2.34
ITGA7-214ENST00000555809 HMGXB3Q12766 1538 aa29.61■■■□□ 2.33
ITGA7-214ENST00000555809 ERCC6Q03468 1493 aa29.54■■■□□ 2.32
ITGA7-214ENST00000555809 BAZ1BQ9UIG0 1483 aaKnown RBP29.54■■■□□ 2.32
ITGA7-214ENST00000555809 PEG3Q9GZU2 1588 aa29.42■■■□□ 2.3
ITGA7-214ENST00000555809 MROH2BQ7Z745 1585 aa29.39■■■□□ 2.3
ITGA7-214ENST00000555809 CUX2O14529 1486 aa29.36■■■□□ 2.29
ITGA7-214ENST00000555809 NESP48681 1621 aa29.28■■■□□ 2.28
ITGA7-214ENST00000555809 DNAJC5Q9H3Z4 198 aa29.25■■■□□ 2.27
ITGA7-214ENST00000555809 LAMC3Q9Y6N6 1575 aa29.15■■■□□ 2.26
ITGA7-214ENST00000555809 PDS5BQ9NTI5 1447 aa29.09■■■□□ 2.25
ITGA7-214ENST00000555809 WIZO95785 1651 aa29.02■■■□□ 2.24
ITGA7-214ENST00000555809 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
ITGA7-214ENST00000555809 THOC2Q8NI27 1593 aaKnown RBP28.9■■■□□ 2.22
ITGA7-214ENST00000555809 RSF1Q96T23 1441 aaPredicted RBP28.88■■■□□ 2.21
ITGA7-214ENST00000555809 KIF21AQ7Z4S6 1674 aa28.86■■■□□ 2.21
ITGA7-214ENST00000555809 MRC2Q9UBG0 1479 aa28.74■■■□□ 2.19
ITGA7-214ENST00000555809 TOP2AP11388 1531 aaKnown RBP28.72■■■□□ 2.19
ITGA7-214ENST00000555809 CEP164Q9UPV0 1460 aa28.67■■■□□ 2.18
ITGA7-214ENST00000555809 CFTRP13569 1480 aa28.65■■■□□ 2.18
ITGA7-214ENST00000555809 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
ITGA7-214ENST00000555809 WDR62O43379 1518 aa28.61■■■□□ 2.17
ITGA7-214ENST00000555809 CCDC88BA6NC98 1476 aa28.42■■■□□ 2.14
ITGA7-214ENST00000555809 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.13
ITGA7-214ENST00000555809 PRDM2Q13029 1718 aa28.26■■■□□ 2.11
ITGA7-214ENST00000555809 OSCARQ8IYS5 282 aa28.18■■■□□ 2.1
ITGA7-214ENST00000555809 ABCC8Q09428 1581 aa28.14■■■□□ 2.1
ITGA7-214ENST00000555809 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
ITGA7-214ENST00000555809 TRIM41Q8WV44 630 aa28.09■■■□□ 2.09
ITGA7-214ENST00000555809 TOPBP1Q92547 1522 aa28.08■■■□□ 2.09
ITGA7-214ENST00000555809 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
ITGA7-214ENST00000555809 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
ITGA7-214ENST00000555809 SUPT5HO00267 1087 aaKnown RBP27.87■■■□□ 2.05
ITGA7-214ENST00000555809 POLA1P09884 1462 aaPredicted RBP27.8■■■□□ 2.04
ITGA7-214ENST00000555809 EIF4G3O43432 1585 aaKnown RBP27.8■■■□□ 2.04
ITGA7-214ENST00000555809 AQRO60306 1485 aaKnown RBP eCLIP27.79■■■□□ 2.04
ITGA7-214ENST00000555809 SOGA1O94964 1423 aa27.76■■■□□ 2.04
ITGA7-214ENST00000555809 TARBP1Q13395 1621 aaKnown RBP27.76■■■□□ 2.03
ITGA7-214ENST00000555809 FBLN2P98095 1184 aa27.75■■■□□ 2.03
ITGA7-214ENST00000555809 RAD54L2Q9Y4B4 1467 aa27.7■■■□□ 2.03
ITGA7-214ENST00000555809 TDRD9Q8NDG6 1382 aaKnown RBP27.68■■■□□ 2.02
ITGA7-214ENST00000555809 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
ITGA7-214ENST00000555809 CUX1P39880 1505 aa27.62■■■□□ 2.01
ITGA7-214ENST00000555809 RIMBP3CA6NJZ7 1639 aa27.59■■■□□ 2.01
ITGA7-214ENST00000555809 RIMBP3BA6NNM3 1639 aa27.59■■■□□ 2.01
ITGA7-214ENST00000555809 RIMBP3Q9UFD9 1639 aa27.59■■■□□ 2.01
ITGA7-214ENST00000555809 ARHGEF11O15085 1522 aa27.56■■■□□ 2
ITGA7-214ENST00000555809 WDR97A6NE52 1622 aa27.56■■■□□ 2
ITGA7-214ENST00000555809 CHMP7Q8WUX9 453 aaPredicted RBP27.55■■■□□ 2
ITGA7-214ENST00000555809 CHD1O14646 1710 aa27.53■■■□□ 2
ITGA7-214ENST00000555809 CYB5RLQ6IPT4 315 aa27.49■■□□□ 1.99
ITGA7-214ENST00000555809 GRIN2BQ13224 1484 aa27.49■■□□□ 1.99
ITGA7-214ENST00000555809 SNAPC4Q5SXM2 1469 aa27.49■■□□□ 1.99
ITGA7-214ENST00000555809 MAGI1Q96QZ7 1491 aaPredicted RBP27.45■■□□□ 1.99
ITGA7-214ENST00000555809 GAPVD1Q14C86 1478 aa27.4■■□□□ 1.98
ITGA7-214ENST00000555809 SYNJ2O15056 1496 aa27.37■■□□□ 1.97
ITGA7-214ENST00000555809 WRNQ14191 1432 aaPredicted RBP eCLIP27.36■■□□□ 1.97
ITGA7-214ENST00000555809 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
ITGA7-214ENST00000555809 SYNJ1O43426 1573 aa27.34■■□□□ 1.97
ITGA7-214ENST00000555809 ARAP1Q96P48 1450 aa27.26■■□□□ 1.95
ITGA7-214ENST00000555809 PBRM1Q86U86 1689 aa27.26■■□□□ 1.95
ITGA7-214ENST00000555809 CLASP1Q7Z460 1538 aa27.24■■□□□ 1.95
ITGA7-214ENST00000555809 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
ITGA7-214ENST00000555809 TOP2BQ02880 1626 aa27.22■■□□□ 1.95
ITGA7-214ENST00000555809 TRHP20396 242 aaPredicted RBP27.21■■□□□ 1.95
ITGA7-214ENST00000555809 BIVM-ERCC5R4GMW8 1640 aa27.18■■□□□ 1.94
ITGA7-214ENST00000555809 GRIN2AQ12879 1464 aa27.09■■□□□ 1.93
ITGA7-214ENST00000555809 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
ITGA7-214ENST00000555809 ADAMTS12P58397 1594 aa27.03■■□□□ 1.92
ITGA7-214ENST00000555809 ERICH3Q5RHP9 1530 aa27.03■■□□□ 1.92
ITGA7-214ENST00000555809 NUP160Q12769 1436 aa26.98■■□□□ 1.91
ITGA7-214ENST00000555809 CEP170Q5SW79 1584 aa26.92■■□□□ 1.9
ITGA7-214ENST00000555809 JPH4Q96JJ6 628 aa26.83■■□□□ 1.89
ITGA7-214ENST00000555809 KIF27Q86VH2 1401 aa26.82■■□□□ 1.88
ITGA7-214ENST00000555809 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
ITGA7-214ENST00000555809 PRG4Q92954 1404 aaPredicted RBP26.78■■□□□ 1.88
ITGA7-214ENST00000555809 SHROOM2Q13796 1616 aa26.78■■□□□ 1.88
ITGA7-214ENST00000555809 IGF1RP08069 1367 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms