RNA–Protein interactions for RNA: ENST00000555778.1

SDR39U1-214, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-214ENST00000555778 NISCHQ9Y2I1 1504 aa34.25■■■■□ 3.07
SDR39U1-214ENST00000555778 CCDC180Q9P1Z9 1646 aa30.69■■■□□ 2.5
SDR39U1-214ENST00000555778 ABCC9O60706 1549 aa30.47■■■□□ 2.47
SDR39U1-214ENST00000555778 RB1CC1Q8TDY2 1594 aa29.05■■■□□ 2.24
SDR39U1-214ENST00000555778 NACADO15069 1562 aa28.85■■■□□ 2.21
SDR39U1-214ENST00000555778 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
SDR39U1-214ENST00000555778 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
SDR39U1-214ENST00000555778 ZCCHC6Q5VYS8 1495 aaKnown RBP28.49■■■□□ 2.15
SDR39U1-214ENST00000555778 MYO15BQ96JP2 1530 aa28.45■■■□□ 2.15
SDR39U1-214ENST00000555778 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
SDR39U1-214ENST00000555778 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
SDR39U1-214ENST00000555778 DNAJC5BQ9UF47 199 aa28.23■■■□□ 2.11
SDR39U1-214ENST00000555778 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
SDR39U1-214ENST00000555778 SCRIBQ14160 1630 aa28.1■■■□□ 2.09
SDR39U1-214ENST00000555778 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
SDR39U1-214ENST00000555778 CC2D2AQ9P2K1 1620 aa27.53■■■□□ 2
SDR39U1-214ENST00000555778 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
SDR39U1-214ENST00000555778 CECR2Q9BXF3 1484 aa27.36■■□□□ 1.97
SDR39U1-214ENST00000555778 SMARCA4P51532 1647 aa26.75■■□□□ 1.87
SDR39U1-214ENST00000555778 ATAD2BQ9ULI0 1458 aa26.62■■□□□ 1.85
SDR39U1-214ENST00000555778 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
SDR39U1-214ENST00000555778 NCAPD3P42695 1498 aa26.57■■□□□ 1.84
SDR39U1-214ENST00000555778 SMARCA2P51531 1590 aa26.56■■□□□ 1.84
SDR39U1-214ENST00000555778 HMGXB3Q12766 1538 aa26.52■■□□□ 1.84
SDR39U1-214ENST00000555778 MROH2BQ7Z745 1585 aa26.46■■□□□ 1.83
SDR39U1-214ENST00000555778 BAZ1BQ9UIG0 1483 aaKnown RBP26.42■■□□□ 1.82
SDR39U1-214ENST00000555778 PEG3Q9GZU2 1588 aa26.38■■□□□ 1.81
SDR39U1-214ENST00000555778 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
SDR39U1-214ENST00000555778 NESP48681 1621 aa26.27■■□□□ 1.8
SDR39U1-214ENST00000555778 WIZO95785 1651 aa26.22■■□□□ 1.79
SDR39U1-214ENST00000555778 CUX2O14529 1486 aa26.04■■□□□ 1.76
SDR39U1-214ENST00000555778 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
SDR39U1-214ENST00000555778 KIF21AQ7Z4S6 1674 aa26.01■■□□□ 1.75
SDR39U1-214ENST00000555778 THOC2Q8NI27 1593 aaKnown RBP25.98■■□□□ 1.75
SDR39U1-214ENST00000555778 RSF1Q96T23 1441 aaPredicted RBP25.93■■□□□ 1.74
SDR39U1-214ENST00000555778 TOP2AP11388 1531 aaKnown RBP25.84■■□□□ 1.73
SDR39U1-214ENST00000555778 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
SDR39U1-214ENST00000555778 CADPSQ9ULU8 1353 aa25.79■■□□□ 1.72
SDR39U1-214ENST00000555778 MRC2Q9UBG0 1479 aa25.66■■□□□ 1.7
SDR39U1-214ENST00000555778 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
SDR39U1-214ENST00000555778 DNAJC5Q9H3Z4 198 aa25.62■■□□□ 1.69
SDR39U1-214ENST00000555778 WDR62O43379 1518 aa25.61■■□□□ 1.69
SDR39U1-214ENST00000555778 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
SDR39U1-214ENST00000555778 CFTRP13569 1480 aa25.59■■□□□ 1.69
SDR39U1-214ENST00000555778 PRDM2Q13029 1718 aa25.54■■□□□ 1.68
SDR39U1-214ENST00000555778 CCDC88BA6NC98 1476 aa25.48■■□□□ 1.67
SDR39U1-214ENST00000555778 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
SDR39U1-214ENST00000555778 TOPBP1Q92547 1522 aa25.16■■□□□ 1.62
SDR39U1-214ENST00000555778 DNMBPQ6XZF7 1577 aa25.11■■□□□ 1.61
SDR39U1-214ENST00000555778 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
SDR39U1-214ENST00000555778 IFT140Q96RY7 1462 aa25.04■■□□□ 1.6
SDR39U1-214ENST00000555778 EIF4G3O43432 1585 aaKnown RBP25.01■■□□□ 1.59
SDR39U1-214ENST00000555778 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
SDR39U1-214ENST00000555778 ABCC8Q09428 1581 aa24.97■■□□□ 1.59
SDR39U1-214ENST00000555778 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
SDR39U1-214ENST00000555778 POLA1P09884 1462 aaPredicted RBP24.92■■□□□ 1.58
SDR39U1-214ENST00000555778 CUX1P39880 1505 aa24.86■■□□□ 1.57
SDR39U1-214ENST00000555778 RAD54L2Q9Y4B4 1467 aa24.84■■□□□ 1.57
SDR39U1-214ENST00000555778 FGD5Q6ZNL6 1462 aa24.83■■□□□ 1.56
SDR39U1-214ENST00000555778 AQRO60306 1485 aaKnown RBP eCLIP24.82■■□□□ 1.56
SDR39U1-214ENST00000555778 CHD1O14646 1710 aa24.81■■□□□ 1.56
SDR39U1-214ENST00000555778 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
SDR39U1-214ENST00000555778 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
SDR39U1-214ENST00000555778 WDR97A6NE52 1622 aa24.72■■□□□ 1.55
SDR39U1-214ENST00000555778 SOGA1O94964 1423 aa24.72■■□□□ 1.55
SDR39U1-214ENST00000555778 TDRD9Q8NDG6 1382 aaKnown RBP24.69■■□□□ 1.54
SDR39U1-214ENST00000555778 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
SDR39U1-214ENST00000555778 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
SDR39U1-214ENST00000555778 RIMBP3Q9UFD9 1639 aa24.68■■□□□ 1.54
SDR39U1-214ENST00000555778 SNAPC4Q5SXM2 1469 aa24.64■■□□□ 1.54
SDR39U1-214ENST00000555778 PBRM1Q86U86 1689 aa24.62■■□□□ 1.53
SDR39U1-214ENST00000555778 FBLN2P98095 1184 aa24.59■■□□□ 1.53
SDR39U1-214ENST00000555778 ARHGEF11O15085 1522 aa24.59■■□□□ 1.53
SDR39U1-214ENST00000555778 SYNJ1O43426 1573 aa24.56■■□□□ 1.52
SDR39U1-214ENST00000555778 BIVM-ERCC5R4GMW8 1640 aa24.54■■□□□ 1.52
SDR39U1-214ENST00000555778 ABCA5Q8WWZ7 1642 aa24.53■■□□□ 1.52
SDR39U1-214ENST00000555778 GRIN2BQ13224 1484 aa24.51■■□□□ 1.51
SDR39U1-214ENST00000555778 TOP2BQ02880 1626 aa24.5■■□□□ 1.51
SDR39U1-214ENST00000555778 MAGI1Q96QZ7 1491 aaPredicted RBP24.49■■□□□ 1.51
SDR39U1-214ENST00000555778 ABCA10Q8WWZ4 1543 aa24.49■■□□□ 1.51
SDR39U1-214ENST00000555778 GAPVD1Q14C86 1478 aa24.48■■□□□ 1.51
SDR39U1-214ENST00000555778 WRNQ14191 1432 aaPredicted RBP eCLIP24.47■■□□□ 1.51
SDR39U1-214ENST00000555778 CLASP1Q7Z460 1538 aa24.43■■□□□ 1.5
SDR39U1-214ENST00000555778 SYNJ2O15056 1496 aa24.42■■□□□ 1.5
SDR39U1-214ENST00000555778 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
SDR39U1-214ENST00000555778 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
SDR39U1-214ENST00000555778 ADAMTS12P58397 1594 aa24.36■■□□□ 1.49
SDR39U1-214ENST00000555778 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
SDR39U1-214ENST00000555778 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
SDR39U1-214ENST00000555778 CEP170Q5SW79 1584 aa24.22■■□□□ 1.47
SDR39U1-214ENST00000555778 ERICH3Q5RHP9 1530 aa24.19■■□□□ 1.46
SDR39U1-214ENST00000555778 FHAD1B1AJZ9 1412 aa24.14■■□□□ 1.45
SDR39U1-214ENST00000555778 ERCC6L2Q5T890 1561 aa24.14■■□□□ 1.45
SDR39U1-214ENST00000555778 NUP160Q12769 1436 aa24.1■■□□□ 1.45
SDR39U1-214ENST00000555778 SHROOM2Q13796 1616 aa24.04■■□□□ 1.44
SDR39U1-214ENST00000555778 RUSC2Q8N2Y8 1516 aa24.02■■□□□ 1.44
SDR39U1-214ENST00000555778 CUL7Q14999 1698 aa23.96■■□□□ 1.43
SDR39U1-214ENST00000555778 TRHP20396 242 aaPredicted RBP23.95■■□□□ 1.42
SDR39U1-214ENST00000555778 KIF27Q86VH2 1401 aa23.94■■□□□ 1.42
SDR39U1-214ENST00000555778 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms