RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 NISCHQ9Y2I1 1504 aa36.8■■■■□ 3.48
EFCAB11-207ENST00000555608 CCDC180Q9P1Z9 1646 aa32.91■■■□□ 2.86
EFCAB11-207ENST00000555608 ABCC9O60706 1549 aa32.53■■■□□ 2.8
EFCAB11-207ENST00000555608 RB1CC1Q8TDY2 1594 aa31.1■■■□□ 2.57
EFCAB11-207ENST00000555608 NACADO15069 1562 aa30.95■■■□□ 2.54
EFCAB11-207ENST00000555608 DCAF8L2P0C7V8 631 aa30.84■■■□□ 2.53
EFCAB11-207ENST00000555608 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
EFCAB11-207ENST00000555608 MYO15BQ96JP2 1530 aa30.6■■■□□ 2.49
EFCAB11-207ENST00000555608 UNC13AQ9UPW8 1703 aa30.54■■■□□ 2.48
EFCAB11-207ENST00000555608 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
EFCAB11-207ENST00000555608 DNAJC5BQ9UF47 199 aa30.33■■■□□ 2.45
EFCAB11-207ENST00000555608 PABPN1Q86U42 306 aaKnown RBP eCLIP30.28■■■□□ 2.44
EFCAB11-207ENST00000555608 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
EFCAB11-207ENST00000555608 SCRIBQ14160 1630 aa30.07■■■□□ 2.4
EFCAB11-207ENST00000555608 SHROOM4Q9ULL8 1493 aa29.74■■■□□ 2.35
EFCAB11-207ENST00000555608 EIF4G1Q04637 1599 aaKnown RBP29.43■■■□□ 2.3
EFCAB11-207ENST00000555608 CC2D2AQ9P2K1 1620 aa29.42■■■□□ 2.3
EFCAB11-207ENST00000555608 CECR2Q9BXF3 1484 aa29.22■■■□□ 2.27
EFCAB11-207ENST00000555608 SMARCA4P51532 1647 aa28.68■■■□□ 2.18
EFCAB11-207ENST00000555608 ATAD2BQ9ULI0 1458 aa28.54■■■□□ 2.16
EFCAB11-207ENST00000555608 BAZ1AQ9NRL2 1556 aaPredicted RBP28.54■■■□□ 2.16
EFCAB11-207ENST00000555608 NCAPD3P42695 1498 aa28.52■■■□□ 2.16
EFCAB11-207ENST00000555608 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
EFCAB11-207ENST00000555608 HMGXB3Q12766 1538 aa28.43■■■□□ 2.14
EFCAB11-207ENST00000555608 MROH2BQ7Z745 1585 aa28.4■■■□□ 2.14
EFCAB11-207ENST00000555608 PEG3Q9GZU2 1588 aa28.34■■■□□ 2.13
EFCAB11-207ENST00000555608 BAZ1BQ9UIG0 1483 aaKnown RBP28.32■■■□□ 2.12
EFCAB11-207ENST00000555608 WIZO95785 1651 aa28.13■■■□□ 2.09
EFCAB11-207ENST00000555608 NESP48681 1621 aa28.07■■■□□ 2.08
EFCAB11-207ENST00000555608 ERCC6Q03468 1493 aa28.03■■■□□ 2.08
EFCAB11-207ENST00000555608 RSF1Q96T23 1441 aaPredicted RBP27.89■■■□□ 2.06
EFCAB11-207ENST00000555608 LAMC3Q9Y6N6 1575 aa27.89■■■□□ 2.05
EFCAB11-207ENST00000555608 CUX2O14529 1486 aa27.86■■■□□ 2.05
EFCAB11-207ENST00000555608 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
EFCAB11-207ENST00000555608 DNAJC5Q9H3Z4 198 aa27.78■■■□□ 2.04
EFCAB11-207ENST00000555608 TOP2AP11388 1531 aaKnown RBP27.76■■■□□ 2.03
EFCAB11-207ENST00000555608 THOC2Q8NI27 1593 aaKnown RBP27.74■■■□□ 2.03
EFCAB11-207ENST00000555608 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
EFCAB11-207ENST00000555608 PDS5BQ9NTI5 1447 aa27.64■■■□□ 2.02
EFCAB11-207ENST00000555608 CFTRP13569 1480 aa27.47■■□□□ 1.99
EFCAB11-207ENST00000555608 MRC2Q9UBG0 1479 aa27.45■■□□□ 1.99
EFCAB11-207ENST00000555608 CEP164Q9UPV0 1460 aa27.43■■□□□ 1.98
EFCAB11-207ENST00000555608 FANCD2Q9BXW9 1451 aa27.42■■□□□ 1.98
EFCAB11-207ENST00000555608 CCDC88BA6NC98 1476 aa27.39■■□□□ 1.98
EFCAB11-207ENST00000555608 PRDM2Q13029 1718 aa27.39■■□□□ 1.98
EFCAB11-207ENST00000555608 WDR62O43379 1518 aa27.39■■□□□ 1.98
EFCAB11-207ENST00000555608 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
EFCAB11-207ENST00000555608 TOPBP1Q92547 1522 aa26.96■■□□□ 1.91
EFCAB11-207ENST00000555608 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
EFCAB11-207ENST00000555608 DNMBPQ6XZF7 1577 aa26.92■■□□□ 1.9
EFCAB11-207ENST00000555608 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
EFCAB11-207ENST00000555608 IFT140Q96RY7 1462 aa26.83■■□□□ 1.89
EFCAB11-207ENST00000555608 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
EFCAB11-207ENST00000555608 EIF4G3O43432 1585 aaKnown RBP26.74■■□□□ 1.87
EFCAB11-207ENST00000555608 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
EFCAB11-207ENST00000555608 POLA1P09884 1462 aaPredicted RBP26.71■■□□□ 1.87
EFCAB11-207ENST00000555608 TRIM41Q8WV44 630 aa26.67■■□□□ 1.86
EFCAB11-207ENST00000555608 CUX1P39880 1505 aa26.66■■□□□ 1.86
EFCAB11-207ENST00000555608 RAD54L2Q9Y4B4 1467 aa26.62■■□□□ 1.85
EFCAB11-207ENST00000555608 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
EFCAB11-207ENST00000555608 AQRO60306 1485 aaKnown RBP eCLIP26.58■■□□□ 1.85
EFCAB11-207ENST00000555608 OSCARQ8IYS5 282 aa26.56■■□□□ 1.84
EFCAB11-207ENST00000555608 SOGA1O94964 1423 aa26.54■■□□□ 1.84
EFCAB11-207ENST00000555608 CHD1O14646 1710 aa26.5■■□□□ 1.83
EFCAB11-207ENST00000555608 WDR97A6NE52 1622 aa26.5■■□□□ 1.83
EFCAB11-207ENST00000555608 TDRD9Q8NDG6 1382 aaKnown RBP26.46■■□□□ 1.83
EFCAB11-207ENST00000555608 BIVM-ERCC5R4GMW8 1640 aa26.37■■□□□ 1.81
EFCAB11-207ENST00000555608 SYNJ1O43426 1573 aa26.37■■□□□ 1.81
EFCAB11-207ENST00000555608 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
EFCAB11-207ENST00000555608 PBRM1Q86U86 1689 aa26.35■■□□□ 1.81
EFCAB11-207ENST00000555608 TOP2BQ02880 1626 aa26.33■■□□□ 1.81
EFCAB11-207ENST00000555608 RIMBP3CA6NJZ7 1639 aa26.32■■□□□ 1.8
EFCAB11-207ENST00000555608 RIMBP3BA6NNM3 1639 aa26.32■■□□□ 1.8
EFCAB11-207ENST00000555608 RIMBP3Q9UFD9 1639 aa26.32■■□□□ 1.8
EFCAB11-207ENST00000555608 WRNQ14191 1432 aaPredicted RBP eCLIP26.31■■□□□ 1.8
EFCAB11-207ENST00000555608 ABCA10Q8WWZ4 1543 aa26.3■■□□□ 1.8
EFCAB11-207ENST00000555608 ABCA5Q8WWZ7 1642 aa26.3■■□□□ 1.8
EFCAB11-207ENST00000555608 FBLN2P98095 1184 aa26.29■■□□□ 1.8
EFCAB11-207ENST00000555608 GRIN2BQ13224 1484 aa26.29■■□□□ 1.8
EFCAB11-207ENST00000555608 GAPVD1Q14C86 1478 aa26.25■■□□□ 1.79
EFCAB11-207ENST00000555608 MAGI1Q96QZ7 1491 aaPredicted RBP26.25■■□□□ 1.79
EFCAB11-207ENST00000555608 ARHGEF11O15085 1522 aa26.23■■□□□ 1.79
EFCAB11-207ENST00000555608 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
EFCAB11-207ENST00000555608 CLASP1Q7Z460 1538 aa26.13■■□□□ 1.77
EFCAB11-207ENST00000555608 CHMP7Q8WUX9 453 aaPredicted RBP26.12■■□□□ 1.77
EFCAB11-207ENST00000555608 ADAMTS12P58397 1594 aa26.08■■□□□ 1.77
EFCAB11-207ENST00000555608 ARAP1Q96P48 1450 aa26.01■■□□□ 1.75
EFCAB11-207ENST00000555608 CYB5RLQ6IPT4 315 aa25.98■■□□□ 1.75
EFCAB11-207ENST00000555608 ERICH3Q5RHP9 1530 aa25.98■■□□□ 1.75
EFCAB11-207ENST00000555608 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
EFCAB11-207ENST00000555608 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
EFCAB11-207ENST00000555608 FHAD1B1AJZ9 1412 aa25.91■■□□□ 1.74
EFCAB11-207ENST00000555608 NUP160Q12769 1436 aa25.85■■□□□ 1.73
EFCAB11-207ENST00000555608 ERCC6L2Q5T890 1561 aa25.79■■□□□ 1.72
EFCAB11-207ENST00000555608 SHROOM2Q13796 1616 aa25.75■■□□□ 1.71
EFCAB11-207ENST00000555608 KIF27Q86VH2 1401 aa25.75■■□□□ 1.71
EFCAB11-207ENST00000555608 CUL7Q14999 1698 aa25.73■■□□□ 1.71
EFCAB11-207ENST00000555608 RUSC2Q8N2Y8 1516 aa25.72■■□□□ 1.71
EFCAB11-207ENST00000555608 TRHP20396 242 aaPredicted RBP25.7■■□□□ 1.7
EFCAB11-207ENST00000555608 IGF1RP08069 1367 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms