RNA–Protein interactions for RNA: ENST00000555598.1

RGMA-207, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 4

Gene RGMA, Length 547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-207ENST00000555598 NISCHQ9Y2I1 1504 aa33.19■■■□□ 2.9
RGMA-207ENST00000555598 CCDC180Q9P1Z9 1646 aa29.67■■■□□ 2.34
RGMA-207ENST00000555598 ABCC9O60706 1549 aa29.36■■■□□ 2.29
RGMA-207ENST00000555598 RB1CC1Q8TDY2 1594 aa28.11■■■□□ 2.09
RGMA-207ENST00000555598 DNAJC5BQ9UF47 199 aa28.05■■■□□ 2.08
RGMA-207ENST00000555598 NACADO15069 1562 aa27.99■■■□□ 2.07
RGMA-207ENST00000555598 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
RGMA-207ENST00000555598 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
RGMA-207ENST00000555598 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
RGMA-207ENST00000555598 DCAF1Q9Y4B6 1507 aa27.46■■□□□ 1.99
RGMA-207ENST00000555598 UNC13AQ9UPW8 1703 aa27.42■■□□□ 1.98
RGMA-207ENST00000555598 PABPN1Q86U42 306 aaKnown RBP eCLIP27.4■■□□□ 1.98
RGMA-207ENST00000555598 BICRAQ9NZM4 1560 aa27.21■■□□□ 1.95
RGMA-207ENST00000555598 SCRIBQ14160 1630 aa27.05■■□□□ 1.92
RGMA-207ENST00000555598 SHROOM4Q9ULL8 1493 aa26.96■■□□□ 1.91
RGMA-207ENST00000555598 EIF4G1Q04637 1599 aaKnown RBP26.55■■□□□ 1.84
RGMA-207ENST00000555598 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
RGMA-207ENST00000555598 CECR2Q9BXF3 1484 aa26.5■■□□□ 1.83
RGMA-207ENST00000555598 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
RGMA-207ENST00000555598 SMARCA4P51532 1647 aa25.83■■□□□ 1.73
RGMA-207ENST00000555598 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
RGMA-207ENST00000555598 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
RGMA-207ENST00000555598 ATAD2BQ9ULI0 1458 aa25.77■■□□□ 1.72
RGMA-207ENST00000555598 SMARCA2P51531 1590 aa25.76■■□□□ 1.71
RGMA-207ENST00000555598 HMGXB3Q12766 1538 aa25.67■■□□□ 1.7
RGMA-207ENST00000555598 PEG3Q9GZU2 1588 aa25.58■■□□□ 1.69
RGMA-207ENST00000555598 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
RGMA-207ENST00000555598 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
RGMA-207ENST00000555598 CUX2O14529 1486 aa25.43■■□□□ 1.66
RGMA-207ENST00000555598 ERCC6Q03468 1493 aa25.37■■□□□ 1.65
RGMA-207ENST00000555598 WIZO95785 1651 aa25.27■■□□□ 1.64
RGMA-207ENST00000555598 NESP48681 1621 aa25.26■■□□□ 1.63
RGMA-207ENST00000555598 LAMC3Q9Y6N6 1575 aa25.2■■□□□ 1.62
RGMA-207ENST00000555598 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
RGMA-207ENST00000555598 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
RGMA-207ENST00000555598 CADPSQ9ULU8 1353 aa25.05■■□□□ 1.6
RGMA-207ENST00000555598 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
RGMA-207ENST00000555598 KIF21AQ7Z4S6 1674 aa24.98■■□□□ 1.59
RGMA-207ENST00000555598 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
RGMA-207ENST00000555598 CFTRP13569 1480 aa24.83■■□□□ 1.56
RGMA-207ENST00000555598 MRC2Q9UBG0 1479 aa24.8■■□□□ 1.56
RGMA-207ENST00000555598 CEP164Q9UPV0 1460 aa24.78■■□□□ 1.56
RGMA-207ENST00000555598 FANCD2Q9BXW9 1451 aa24.77■■□□□ 1.56
RGMA-207ENST00000555598 WDR62O43379 1518 aa24.72■■□□□ 1.55
RGMA-207ENST00000555598 TRIM41Q8WV44 630 aa24.71■■□□□ 1.55
RGMA-207ENST00000555598 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
RGMA-207ENST00000555598 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
RGMA-207ENST00000555598 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
RGMA-207ENST00000555598 OSCARQ8IYS5 282 aa24.38■■□□□ 1.49
RGMA-207ENST00000555598 ABCC8Q09428 1581 aa24.34■■□□□ 1.49
RGMA-207ENST00000555598 TOPBP1Q92547 1522 aa24.32■■□□□ 1.48
RGMA-207ENST00000555598 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
RGMA-207ENST00000555598 DNMBPQ6XZF7 1577 aa24.28■■□□□ 1.48
RGMA-207ENST00000555598 IFT140Q96RY7 1462 aa24.27■■□□□ 1.48
RGMA-207ENST00000555598 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
RGMA-207ENST00000555598 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
RGMA-207ENST00000555598 TARBP1Q13395 1621 aaKnown RBP24.07■■□□□ 1.44
RGMA-207ENST00000555598 EIF4G3O43432 1585 aaKnown RBP24.07■■□□□ 1.44
RGMA-207ENST00000555598 CUX1P39880 1505 aa24■■□□□ 1.43
RGMA-207ENST00000555598 SOGA1O94964 1423 aa24■■□□□ 1.43
RGMA-207ENST00000555598 FGD5Q6ZNL6 1462 aa23.99■■□□□ 1.43
RGMA-207ENST00000555598 AQRO60306 1485 aaKnown RBP eCLIP23.98■■□□□ 1.43
RGMA-207ENST00000555598 RAD54L2Q9Y4B4 1467 aa23.98■■□□□ 1.43
RGMA-207ENST00000555598 WDR97A6NE52 1622 aa23.92■■□□□ 1.42
RGMA-207ENST00000555598 TDRD9Q8NDG6 1382 aaKnown RBP23.9■■□□□ 1.42
RGMA-207ENST00000555598 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
RGMA-207ENST00000555598 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
RGMA-207ENST00000555598 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
RGMA-207ENST00000555598 CYB5RLQ6IPT4 315 aa23.84■■□□□ 1.41
RGMA-207ENST00000555598 CHD1O14646 1710 aa23.82■■□□□ 1.4
RGMA-207ENST00000555598 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
RGMA-207ENST00000555598 FBLN2P98095 1184 aa23.8■■□□□ 1.4
RGMA-207ENST00000555598 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
RGMA-207ENST00000555598 SNAPC4Q5SXM2 1469 aa23.77■■□□□ 1.4
RGMA-207ENST00000555598 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
RGMA-207ENST00000555598 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
RGMA-207ENST00000555598 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
RGMA-207ENST00000555598 TOP2BQ02880 1626 aa23.73■■□□□ 1.39
RGMA-207ENST00000555598 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
RGMA-207ENST00000555598 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
RGMA-207ENST00000555598 PBRM1Q86U86 1689 aa23.7■■□□□ 1.38
RGMA-207ENST00000555598 TRHP20396 242 aaPredicted RBP23.69■■□□□ 1.38
RGMA-207ENST00000555598 CHMP7Q8WUX9 453 aaPredicted RBP23.69■■□□□ 1.38
RGMA-207ENST00000555598 SYNJ1O43426 1573 aa23.69■■□□□ 1.38
RGMA-207ENST00000555598 ABCA5Q8WWZ7 1642 aa23.67■■□□□ 1.38
RGMA-207ENST00000555598 SYNJ2O15056 1496 aa23.65■■□□□ 1.38
RGMA-207ENST00000555598 ARAP1Q96P48 1450 aa23.56■■□□□ 1.36
RGMA-207ENST00000555598 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
RGMA-207ENST00000555598 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
RGMA-207ENST00000555598 ERICH3Q5RHP9 1530 aa23.47■■□□□ 1.35
RGMA-207ENST00000555598 GRIN2AQ12879 1464 aa23.45■■□□□ 1.34
RGMA-207ENST00000555598 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
RGMA-207ENST00000555598 NUP160Q12769 1436 aa23.35■■□□□ 1.33
RGMA-207ENST00000555598 CEP170Q5SW79 1584 aa23.34■■□□□ 1.33
RGMA-207ENST00000555598 KIF27Q86VH2 1401 aa23.31■■□□□ 1.32
RGMA-207ENST00000555598 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
RGMA-207ENST00000555598 IGF1RP08069 1367 aa23.21■■□□□ 1.31
RGMA-207ENST00000555598 SHROOM2Q13796 1616 aa23.21■■□□□ 1.31
RGMA-207ENST00000555598 CUL7Q14999 1698 aa23.2■■□□□ 1.3
RGMA-207ENST00000555598 ERCC6L2Q5T890 1561 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms