RNA–Protein interactions for RNA: ENST00000555568.5

NSFL1C-212, Transcript of NSFL1 cofactor, humanhuman

TSL 3

Gene NSFL1C, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-212ENST00000555568 NISCHQ9Y2I1 1504 aa45.19■■■■■ 4.82
NSFL1C-212ENST00000555568 ABCC9O60706 1549 aa40.59■■■■■ 4.09
NSFL1C-212ENST00000555568 CCDC180Q9P1Z9 1646 aa40.56■■■■■ 4.08
NSFL1C-212ENST00000555568 RB1CC1Q8TDY2 1594 aa38.62■■■■□ 3.77
NSFL1C-212ENST00000555568 NACADO15069 1562 aa38.34■■■■□ 3.73
NSFL1C-212ENST00000555568 DCAF8L2P0C7V8 631 aa38.18■■■■□ 3.7
NSFL1C-212ENST00000555568 DNAJC5BQ9UF47 199 aa38■■■■□ 3.67
NSFL1C-212ENST00000555568 MYO15BQ96JP2 1530 aa37.78■■■■□ 3.64
NSFL1C-212ENST00000555568 PABPN1Q86U42 306 aaKnown RBP eCLIP37.77■■■■□ 3.64
NSFL1C-212ENST00000555568 UNC13AQ9UPW8 1703 aa37.73■■■■□ 3.63
NSFL1C-212ENST00000555568 BICRAQ9NZM4 1560 aa37.47■■■■□ 3.59
NSFL1C-212ENST00000555568 ZCCHC6Q5VYS8 1495 aaKnown RBP37.46■■■■□ 3.59
NSFL1C-212ENST00000555568 DCAF1Q9Y4B6 1507 aa37.31■■■■□ 3.56
NSFL1C-212ENST00000555568 SCRIBQ14160 1630 aa37■■■■□ 3.51
NSFL1C-212ENST00000555568 SHROOM4Q9ULL8 1493 aa36.97■■■■□ 3.51
NSFL1C-212ENST00000555568 CC2D2AQ9P2K1 1620 aa36.65■■■■□ 3.46
NSFL1C-212ENST00000555568 EIF4G1Q04637 1599 aaKnown RBP36.57■■■■□ 3.45
NSFL1C-212ENST00000555568 CECR2Q9BXF3 1484 aa36.56■■■■□ 3.44
NSFL1C-212ENST00000555568 NCAPD3P42695 1498 aa35.38■■■■□ 3.25
NSFL1C-212ENST00000555568 ATAD2BQ9ULI0 1458 aa35.29■■■■□ 3.24
NSFL1C-212ENST00000555568 SMARCA4P51532 1647 aa35.27■■■■□ 3.24
NSFL1C-212ENST00000555568 SMARCA2P51531 1590 aa35.21■■■■□ 3.23
NSFL1C-212ENST00000555568 HMGXB3Q12766 1538 aa35.15■■■■□ 3.22
NSFL1C-212ENST00000555568 BAZ1AQ9NRL2 1556 aaPredicted RBP35.09■■■■□ 3.21
NSFL1C-212ENST00000555568 ERCC6Q03468 1493 aa35.07■■■■□ 3.2
NSFL1C-212ENST00000555568 BAZ1BQ9UIG0 1483 aaKnown RBP34.98■■■■□ 3.19
NSFL1C-212ENST00000555568 CUX2O14529 1486 aa34.97■■■■□ 3.19
NSFL1C-212ENST00000555568 DNAJC5Q9H3Z4 198 aa34.91■■■■□ 3.18
NSFL1C-212ENST00000555568 PEG3Q9GZU2 1588 aa34.9■■■■□ 3.18
NSFL1C-212ENST00000555568 NESP48681 1621 aa34.85■■■■□ 3.17
NSFL1C-212ENST00000555568 MROH2BQ7Z745 1585 aa34.83■■■■□ 3.17
NSFL1C-212ENST00000555568 LAMC3Q9Y6N6 1575 aa34.62■■■■□ 3.13
NSFL1C-212ENST00000555568 THOC2Q8NI27 1593 aaKnown RBP34.51■■■■□ 3.12
NSFL1C-212ENST00000555568 WIZO95785 1651 aa34.42■■■■□ 3.1
NSFL1C-212ENST00000555568 KIF21AQ7Z4S6 1674 aa34.42■■■■□ 3.1
NSFL1C-212ENST00000555568 PDS5BQ9NTI5 1447 aa34.4■■■■□ 3.1
NSFL1C-212ENST00000555568 CADPSQ9ULU8 1353 aa34.31■■■■□ 3.08
NSFL1C-212ENST00000555568 MRC2Q9UBG0 1479 aa34.13■■■■□ 3.05
NSFL1C-212ENST00000555568 RSF1Q96T23 1441 aaPredicted RBP34.09■■■■□ 3.05
NSFL1C-212ENST00000555568 WDR62O43379 1518 aa34.04■■■■□ 3.04
NSFL1C-212ENST00000555568 CEP164Q9UPV0 1460 aa34■■■■□ 3.03
NSFL1C-212ENST00000555568 TOP2AP11388 1531 aaKnown RBP33.99■■■■□ 3.03
NSFL1C-212ENST00000555568 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.03
NSFL1C-212ENST00000555568 CFTRP13569 1480 aa33.92■■■■□ 3.02
NSFL1C-212ENST00000555568 URB2Q14146 1524 aaKnown RBP33.66■■■□□ 2.98
NSFL1C-212ENST00000555568 PRDM2Q13029 1718 aa33.61■■■□□ 2.97
NSFL1C-212ENST00000555568 CCDC88BA6NC98 1476 aa33.58■■■□□ 2.97
NSFL1C-212ENST00000555568 TRIM41Q8WV44 630 aa33.45■■■□□ 2.95
NSFL1C-212ENST00000555568 OSCARQ8IYS5 282 aa33.35■■■□□ 2.93
NSFL1C-212ENST00000555568 IFT140Q96RY7 1462 aa33.31■■■□□ 2.92
NSFL1C-212ENST00000555568 TOPBP1Q92547 1522 aa33.3■■■□□ 2.92
NSFL1C-212ENST00000555568 ZNF608Q9ULD9 1512 aaPredicted RBP33.24■■■□□ 2.91
NSFL1C-212ENST00000555568 ABCC8Q09428 1581 aa33.21■■■□□ 2.91
NSFL1C-212ENST00000555568 DNMBPQ6XZF7 1577 aa33.18■■■□□ 2.9
NSFL1C-212ENST00000555568 EIF4G3O43432 1585 aaKnown RBP33.09■■■□□ 2.89
NSFL1C-212ENST00000555568 TARBP1Q13395 1621 aaKnown RBP32.99■■■□□ 2.87
NSFL1C-212ENST00000555568 POLA1P09884 1462 aaPredicted RBP32.96■■■□□ 2.87
NSFL1C-212ENST00000555568 RIMBP3CA6NJZ7 1639 aa32.95■■■□□ 2.86
NSFL1C-212ENST00000555568 RIMBP3BA6NNM3 1639 aa32.95■■■□□ 2.86
NSFL1C-212ENST00000555568 RIMBP3Q9UFD9 1639 aa32.95■■■□□ 2.86
NSFL1C-212ENST00000555568 AQRO60306 1485 aaKnown RBP eCLIP32.94■■■□□ 2.861e-7■■□□□ 12.6
NSFL1C-212ENST00000555568 ARHGEF11O15085 1522 aa32.85■■■□□ 2.85
NSFL1C-212ENST00000555568 RAD54L2Q9Y4B4 1467 aa32.85■■■□□ 2.85
NSFL1C-212ENST00000555568 CHD1O14646 1710 aa32.85■■■□□ 2.85
NSFL1C-212ENST00000555568 SOGA1O94964 1423 aa32.8■■■□□ 2.84
NSFL1C-212ENST00000555568 FGD5Q6ZNL6 1462 aa32.77■■■□□ 2.84
NSFL1C-212ENST00000555568 FBLN2P98095 1184 aa32.76■■■□□ 2.83
NSFL1C-212ENST00000555568 TDRD9Q8NDG6 1382 aaKnown RBP32.74■■■□□ 2.83
NSFL1C-212ENST00000555568 CUX1P39880 1505 aa32.72■■■□□ 2.83
NSFL1C-212ENST00000555568 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
NSFL1C-212ENST00000555568 SNAPC4Q5SXM2 1469 aa32.63■■■□□ 2.81
NSFL1C-212ENST00000555568 SUPT5HO00267 1087 aaKnown RBP32.62■■■□□ 2.81
NSFL1C-212ENST00000555568 CYB5RLQ6IPT4 315 aa32.59■■■□□ 2.81
NSFL1C-212ENST00000555568 MAGI1Q96QZ7 1491 aaPredicted RBP32.54■■■□□ 2.8
NSFL1C-212ENST00000555568 GRIN2BQ13224 1484 aa32.53■■■□□ 2.8
NSFL1C-212ENST00000555568 ARAP1Q96P48 1450 aa32.52■■■□□ 2.8
NSFL1C-212ENST00000555568 CHMP7Q8WUX9 453 aaPredicted RBP32.49■■■□□ 2.79
NSFL1C-212ENST00000555568 SYNJ1O43426 1573 aa32.45■■■□□ 2.79
NSFL1C-212ENST00000555568 CLASP1Q7Z460 1538 aa32.45■■■□□ 2.78
NSFL1C-212ENST00000555568 PBRM1Q86U86 1689 aa32.43■■■□□ 2.78
NSFL1C-212ENST00000555568 SYNJ2O15056 1496 aa32.42■■■□□ 2.78
NSFL1C-212ENST00000555568 GAPVD1Q14C86 1478 aa32.42■■■□□ 2.78
NSFL1C-212ENST00000555568 ABCA10Q8WWZ4 1543 aa32.37■■■□□ 2.77
NSFL1C-212ENST00000555568 ABCA5Q8WWZ7 1642 aa32.34■■■□□ 2.77
NSFL1C-212ENST00000555568 TRHP20396 242 aaPredicted RBP32.26■■■□□ 2.75
NSFL1C-212ENST00000555568 WRNQ14191 1432 aaPredicted RBP eCLIP32.26■■■□□ 2.75
NSFL1C-212ENST00000555568 BIVM-ERCC5R4GMW8 1640 aa32.21■■■□□ 2.75
NSFL1C-212ENST00000555568 TOP2BQ02880 1626 aa32.2■■■□□ 2.75
NSFL1C-212ENST00000555568 GRIN2AQ12879 1464 aa32.12■■■□□ 2.73
NSFL1C-212ENST00000555568 ADAMTS12P58397 1594 aa32.11■■■□□ 2.73
NSFL1C-212ENST00000555568 CEP170Q5SW79 1584 aa32.01■■■□□ 2.71
NSFL1C-212ENST00000555568 FHAD1B1AJZ9 1412 aa32■■■□□ 2.71
NSFL1C-212ENST00000555568 NUP160Q12769 1436 aa32■■■□□ 2.71
NSFL1C-212ENST00000555568 ERICH3Q5RHP9 1530 aa31.98■■■□□ 2.71
NSFL1C-212ENST00000555568 ERCC6L2Q5T890 1561 aa31.94■■■□□ 2.7
NSFL1C-212ENST00000555568 SHROOM2Q13796 1616 aa31.86■■■□□ 2.69
NSFL1C-212ENST00000555568 PRG4Q92954 1404 aaPredicted RBP31.7■■■□□ 2.67
NSFL1C-212ENST00000555568 RUSC2Q8N2Y8 1516 aa31.66■■■□□ 2.66
NSFL1C-212ENST00000555568 JPH4Q96JJ6 628 aa31.65■■■□□ 2.66
NSFL1C-212ENST00000555568 KIF27Q86VH2 1401 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms