RNA–Protein interactions for RNA: ENST00000555499.1

MLH3-208, Transcript of mutL homolog 3, humanhuman

TSL 5

Gene MLH3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3-208ENST00000555499 NISCHQ9Y2I1 1504 aa17.31■□□□□ 0.36
MLH3-208ENST00000555499 ABCC9O60706 1549 aa16.29■□□□□ 0.2
MLH3-208ENST00000555499 DNAJC5BQ9UF47 199 aa15.79■□□□□ 0.12
MLH3-208ENST00000555499 CCDC180Q9P1Z9 1646 aa15.69■□□□□ 0.1
MLH3-208ENST00000555499 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
MLH3-208ENST00000555499 PABPN1Q86U42 306 aaKnown RBP eCLIP15.13■□□□□ 0.01
MLH3-208ENST00000555499 NACADO15069 1562 aa14.94□□□□□ -0.02
MLH3-208ENST00000555499 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
MLH3-208ENST00000555499 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
MLH3-208ENST00000555499 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
MLH3-208ENST00000555499 DNAJC5Q9H3Z4 198 aa14.73□□□□□ -0.05
MLH3-208ENST00000555499 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
MLH3-208ENST00000555499 CC2D2AQ9P2K1 1620 aa14.66□□□□□ -0.06
MLH3-208ENST00000555499 MYO15BQ96JP2 1530 aa14.53□□□□□ -0.08
MLH3-208ENST00000555499 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
MLH3-208ENST00000555499 SHROOM4Q9ULL8 1493 aa14.42□□□□□ -0.1
MLH3-208ENST00000555499 SCRIBQ14160 1630 aa14.39□□□□□ -0.11
MLH3-208ENST00000555499 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
MLH3-208ENST00000555499 DCAF1Q9Y4B6 1507 aa14.19□□□□□ -0.14
MLH3-208ENST00000555499 CUX2O14529 1486 aa14.13□□□□□ -0.15
MLH3-208ENST00000555499 ERCC6Q03468 1493 aa14.04□□□□□ -0.16
MLH3-208ENST00000555499 TRIM41Q8WV44 630 aa13.96□□□□□ -0.17
MLH3-208ENST00000555499 NESP48681 1621 aa13.9□□□□□ -0.19
MLH3-208ENST00000555499 NCAPD3P42695 1498 aa13.82□□□□□ -0.2
MLH3-208ENST00000555499 THOC2Q8NI27 1593 aaKnown RBP13.79□□□□□ -0.2
MLH3-208ENST00000555499 ATAD2BQ9ULI0 1458 aa13.75□□□□□ -0.21
MLH3-208ENST00000555499 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
MLH3-208ENST00000555499 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
MLH3-208ENST00000555499 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
MLH3-208ENST00000555499 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
MLH3-208ENST00000555499 BAZ1BQ9UIG0 1483 aaKnown RBP13.58□□□□□ -0.24
MLH3-208ENST00000555499 LAMC3Q9Y6N6 1575 aa13.58□□□□□ -0.24
MLH3-208ENST00000555499 BAZ1AQ9NRL2 1556 aaPredicted RBP13.51□□□□□ -0.25
MLH3-208ENST00000555499 PDS5BQ9NTI5 1447 aa13.5□□□□□ -0.25
MLH3-208ENST00000555499 MRC2Q9UBG0 1479 aa13.47□□□□□ -0.25
MLH3-208ENST00000555499 WDR62O43379 1518 aa13.45□□□□□ -0.26
MLH3-208ENST00000555499 PEG3Q9GZU2 1588 aa13.44□□□□□ -0.26
MLH3-208ENST00000555499 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
MLH3-208ENST00000555499 MROH2BQ7Z745 1585 aa13.41□□□□□ -0.26
MLH3-208ENST00000555499 CADPSQ9ULU8 1353 aa13.39□□□□□ -0.27
MLH3-208ENST00000555499 RIMBP3CA6NJZ7 1639 aa13.38□□□□□ -0.27
MLH3-208ENST00000555499 RIMBP3BA6NNM3 1639 aa13.38□□□□□ -0.27
MLH3-208ENST00000555499 RIMBP3Q9UFD9 1639 aa13.38□□□□□ -0.27
MLH3-208ENST00000555499 CEP164Q9UPV0 1460 aa13.31□□□□□ -0.28
MLH3-208ENST00000555499 FANCD2Q9BXW9 1451 aa13.27□□□□□ -0.29
MLH3-208ENST00000555499 ARHGEF11O15085 1522 aa13.27□□□□□ -0.29
MLH3-208ENST00000555499 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
MLH3-208ENST00000555499 WIZO95785 1651 aa13.22□□□□□ -0.29
MLH3-208ENST00000555499 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
MLH3-208ENST00000555499 TRHP20396 242 aaPredicted RBP13.2□□□□□ -0.3
MLH3-208ENST00000555499 ZNF608Q9ULD9 1512 aaPredicted RBP13.18□□□□□ -0.3
MLH3-208ENST00000555499 CFTRP13569 1480 aa13.14□□□□□ -0.31
MLH3-208ENST00000555499 ARAP1Q96P48 1450 aa13.13□□□□□ -0.31
MLH3-208ENST00000555499 AEBP2Q6ZN18 517 aaPredicted RBP13.13□□□□□ -0.31
MLH3-208ENST00000555499 CHD1O14646 1710 aa13.05□□□□□ -0.32
MLH3-208ENST00000555499 IFT140Q96RY7 1462 aa13.04□□□□□ -0.32
MLH3-208ENST00000555499 EIF4G3O43432 1585 aaKnown RBP13.04□□□□□ -0.32
MLH3-208ENST00000555499 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
MLH3-208ENST00000555499 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
MLH3-208ENST00000555499 FBLN2P98095 1184 aa12.97□□□□□ -0.33
MLH3-208ENST00000555499 PRDM2Q13029 1718 aa12.96□□□□□ -0.34
MLH3-208ENST00000555499 TOP2AP11388 1531 aaKnown RBP12.95□□□□□ -0.34
MLH3-208ENST00000555499 RSF1Q96T23 1441 aaPredicted RBP12.94□□□□□ -0.34
MLH3-208ENST00000555499 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
MLH3-208ENST00000555499 CLASP1Q7Z460 1538 aa12.87□□□□□ -0.35
MLH3-208ENST00000555499 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
MLH3-208ENST00000555499 CCDC88BA6NC98 1476 aa12.85□□□□□ -0.35
MLH3-208ENST00000555499 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
MLH3-208ENST00000555499 POLA1P09884 1462 aaPredicted RBP12.82□□□□□ -0.36
MLH3-208ENST00000555499 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
MLH3-208ENST00000555499 TDRD9Q8NDG6 1382 aaKnown RBP12.81□□□□□ -0.36
MLH3-208ENST00000555499 ABCC8Q09428 1581 aa12.79□□□□□ -0.36
MLH3-208ENST00000555499 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
MLH3-208ENST00000555499 GAPVD1Q14C86 1478 aa12.75□□□□□ -0.37
MLH3-208ENST00000555499 CHMP7Q8WUX9 453 aaPredicted RBP12.74□□□□□ -0.37
MLH3-208ENST00000555499 SOGA1O94964 1423 aa12.72□□□□□ -0.37
MLH3-208ENST00000555499 ERCC6L2Q5T890 1561 aa12.72□□□□□ -0.37
MLH3-208ENST00000555499 ILDR1Q86SU0 546 aaPredicted RBP12.71□□□□□ -0.37
MLH3-208ENST00000555499 MAGI1Q96QZ7 1491 aaPredicted RBP12.68□□□□□ -0.38
MLH3-208ENST00000555499 SYNJ2O15056 1496 aa12.67□□□□□ -0.38
MLH3-208ENST00000555499 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
MLH3-208ENST00000555499 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
MLH3-208ENST00000555499 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
MLH3-208ENST00000555499 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
MLH3-208ENST00000555499 PBRM1Q86U86 1689 aa12.61□□□□□ -0.39
MLH3-208ENST00000555499 WDR97A6NE52 1622 aa12.61□□□□□ -0.39
MLH3-208ENST00000555499 CUX1P39880 1505 aa12.61□□□□□ -0.39
MLH3-208ENST00000555499 KDM4FA0A1W2PPD8 638 aa12.6□□□□□ -0.39
MLH3-208ENST00000555499 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
MLH3-208ENST00000555499 GRIN2AQ12879 1464 aa12.52□□□□□ -0.41
MLH3-208ENST00000555499 ABCA5Q8WWZ7 1642 aa12.51□□□□□ -0.41
MLH3-208ENST00000555499 SHROOM2Q13796 1616 aa12.49□□□□□ -0.41
MLH3-208ENST00000555499 FAM69CQ0P6D2 419 aa12.49□□□□□ -0.41
MLH3-208ENST00000555499 NUP160Q12769 1436 aa12.48□□□□□ -0.41
MLH3-208ENST00000555499 ADAMTS12P58397 1594 aa12.46□□□□□ -0.42
MLH3-208ENST00000555499 ABCA10Q8WWZ4 1543 aa12.46□□□□□ -0.42
MLH3-208ENST00000555499 ABCC10Q5T3U5 1492 aa12.45□□□□□ -0.42
MLH3-208ENST00000555499 KDM6BO15054 1643 aa12.44□□□□□ -0.42
MLH3-208ENST00000555499 DIP2BQ9P265 1576 aa12.43□□□□□ -0.42
MLH3-208ENST00000555499 PRG4Q92954 1404 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms