RNA–Protein interactions for RNA: ENST00000555483.5

ESR2-210, Transcript of estrogen receptor 2, humanhuman

TSL 1 (best)

Gene ESR2, Length 1,436 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ESR2-210ENST00000555483 NISCHQ9Y2I1 1504 aa36.65■■■■□ 3.46
ESR2-210ENST00000555483 ABCC9O60706 1549 aa33.46■■■□□ 2.95
ESR2-210ENST00000555483 CCDC180Q9P1Z9 1646 aa32.93■■■□□ 2.86
ESR2-210ENST00000555483 DNAJC5BQ9UF47 199 aa31.69■■■□□ 2.66
ESR2-210ENST00000555483 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
ESR2-210ENST00000555483 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
ESR2-210ENST00000555483 NACADO15069 1562 aa31.25■■■□□ 2.59
ESR2-210ENST00000555483 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
ESR2-210ENST00000555483 UNC13AQ9UPW8 1703 aa30.82■■■□□ 2.53
ESR2-210ENST00000555483 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
ESR2-210ENST00000555483 MYO15BQ96JP2 1530 aa30.63■■■□□ 2.49
ESR2-210ENST00000555483 ZCCHC6Q5VYS8 1495 aaKnown RBP30.29■■■□□ 2.44
ESR2-210ENST00000555483 SCRIBQ14160 1630 aa30.16■■■□□ 2.42
ESR2-210ENST00000555483 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
ESR2-210ENST00000555483 CC2D2AQ9P2K1 1620 aa30.13■■■□□ 2.41
ESR2-210ENST00000555483 CECR2Q9BXF3 1484 aa30.12■■■□□ 2.41
ESR2-210ENST00000555483 SHROOM4Q9ULL8 1493 aa30.12■■■□□ 2.41
ESR2-210ENST00000555483 EIF4G1Q04637 1599 aaKnown RBP29.97■■■□□ 2.39
ESR2-210ENST00000555483 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
ESR2-210ENST00000555483 ERCC6Q03468 1493 aa28.89■■■□□ 2.22
ESR2-210ENST00000555483 NCAPD3P42695 1498 aa28.88■■■□□ 2.21
ESR2-210ENST00000555483 CUX2O14529 1486 aa28.85■■■□□ 2.21
ESR2-210ENST00000555483 ATAD2BQ9ULI0 1458 aa28.79■■■□□ 2.2
ESR2-210ENST00000555483 SMARCA4P51532 1647 aa28.66■■■□□ 2.18
ESR2-210ENST00000555483 SMARCA2P51531 1590 aa28.65■■■□□ 2.18
ESR2-210ENST00000555483 NESP48681 1621 aa28.64■■■□□ 2.18
ESR2-210ENST00000555483 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
ESR2-210ENST00000555483 BAZ1BQ9UIG0 1483 aaKnown RBP28.51■■■□□ 2.15
ESR2-210ENST00000555483 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.15
ESR2-210ENST00000555483 THOC2Q8NI27 1593 aaKnown RBP28.33■■■□□ 2.13
ESR2-210ENST00000555483 PEG3Q9GZU2 1588 aa28.3■■■□□ 2.12
ESR2-210ENST00000555483 MROH2BQ7Z745 1585 aa28.28■■■□□ 2.12
ESR2-210ENST00000555483 LAMC3Q9Y6N6 1575 aa28.26■■■□□ 2.11
ESR2-210ENST00000555483 KIF21AQ7Z4S6 1674 aa28.18■■■□□ 2.1
ESR2-210ENST00000555483 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
ESR2-210ENST00000555483 CADPSQ9ULU8 1353 aa28.03■■■□□ 2.08
ESR2-210ENST00000555483 TRIM41Q8WV44 630 aa28■■■□□ 2.07
ESR2-210ENST00000555483 MRC2Q9UBG0 1479 aa27.95■■■□□ 2.07
ESR2-210ENST00000555483 WIZO95785 1651 aa27.92■■■□□ 2.06
ESR2-210ENST00000555483 WDR62O43379 1518 aa27.86■■■□□ 2.05
ESR2-210ENST00000555483 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
ESR2-210ENST00000555483 FANCD2Q9BXW9 1451 aa27.73■■■□□ 2.03
ESR2-210ENST00000555483 CFTRP13569 1480 aa27.62■■■□□ 2.01
ESR2-210ENST00000555483 RSF1Q96T23 1441 aaPredicted RBP27.57■■■□□ 2
ESR2-210ENST00000555483 OSCARQ8IYS5 282 aa27.55■■■□□ 2
ESR2-210ENST00000555483 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
ESR2-210ENST00000555483 TOP2AP11388 1531 aaKnown RBP27.51■■□□□ 1.99
ESR2-210ENST00000555483 ZNF608Q9ULD9 1512 aaPredicted RBP27.28■■□□□ 1.96
ESR2-210ENST00000555483 CCDC88BA6NC98 1476 aa27.25■■□□□ 1.95
ESR2-210ENST00000555483 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
ESR2-210ENST00000555483 IFT140Q96RY7 1462 aa27.21■■□□□ 1.95
ESR2-210ENST00000555483 RIMBP3CA6NJZ7 1639 aa27.2■■□□□ 1.95
ESR2-210ENST00000555483 RIMBP3BA6NNM3 1639 aa27.2■■□□□ 1.95
ESR2-210ENST00000555483 RIMBP3Q9UFD9 1639 aa27.2■■□□□ 1.95
ESR2-210ENST00000555483 TOPBP1Q92547 1522 aa27.16■■□□□ 1.94
ESR2-210ENST00000555483 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
ESR2-210ENST00000555483 EIF4G3O43432 1585 aaKnown RBP27.05■■□□□ 1.92
ESR2-210ENST00000555483 CYB5RLQ6IPT4 315 aa27■■□□□ 1.91
ESR2-210ENST00000555483 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
ESR2-210ENST00000555483 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.91
ESR2-210ENST00000555483 ABCC8Q09428 1581 aa27■■□□□ 1.91
ESR2-210ENST00000555483 FBLN2P98095 1184 aa26.96■■□□□ 1.91
ESR2-210ENST00000555483 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
ESR2-210ENST00000555483 CHD1O14646 1710 aa26.9■■□□□ 1.9
ESR2-210ENST00000555483 POLA1P09884 1462 aaPredicted RBP26.87■■□□□ 1.89
ESR2-210ENST00000555483 RAD54L2Q9Y4B4 1467 aa26.84■■□□□ 1.89
ESR2-210ENST00000555483 TRHP20396 242 aaPredicted RBP26.83■■□□□ 1.89
ESR2-210ENST00000555483 ARAP1Q96P48 1450 aa26.83■■□□□ 1.89
ESR2-210ENST00000555483 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
ESR2-210ENST00000555483 SOGA1O94964 1423 aa26.76■■□□□ 1.87
ESR2-210ENST00000555483 SNAPC4Q5SXM2 1469 aa26.7■■□□□ 1.86
ESR2-210ENST00000555483 FGD5Q6ZNL6 1462 aa26.68■■□□□ 1.86
ESR2-210ENST00000555483 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.85
ESR2-210ENST00000555483 CUX1P39880 1505 aa26.59■■□□□ 1.85
ESR2-210ENST00000555483 CLASP1Q7Z460 1538 aa26.58■■□□□ 1.85
ESR2-210ENST00000555483 GRIN2BQ13224 1484 aa26.54■■□□□ 1.84
ESR2-210ENST00000555483 MAGI1Q96QZ7 1491 aaPredicted RBP26.54■■□□□ 1.84
ESR2-210ENST00000555483 SYNJ1O43426 1573 aa26.53■■□□□ 1.84
ESR2-210ENST00000555483 WDR97A6NE52 1622 aa26.51■■□□□ 1.83
ESR2-210ENST00000555483 SYNJ2O15056 1496 aa26.47■■□□□ 1.83
ESR2-210ENST00000555483 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
ESR2-210ENST00000555483 PBRM1Q86U86 1689 aa26.37■■□□□ 1.81
ESR2-210ENST00000555483 SUPT5HO00267 1087 aaKnown RBP26.31■■□□□ 1.8
ESR2-210ENST00000555483 ABCA10Q8WWZ4 1543 aa26.29■■□□□ 1.8
ESR2-210ENST00000555483 ABCA5Q8WWZ7 1642 aa26.28■■□□□ 1.8
ESR2-210ENST00000555483 AEBP2Q6ZN18 517 aaPredicted RBP26.27■■□□□ 1.8
ESR2-210ENST00000555483 ERCC6L2Q5T890 1561 aa26.23■■□□□ 1.79
ESR2-210ENST00000555483 GRIN2AQ12879 1464 aa26.2■■□□□ 1.78
ESR2-210ENST00000555483 WRNQ14191 1432 aaPredicted RBP eCLIP26.15■■□□□ 1.78
ESR2-210ENST00000555483 ADAMTS12P58397 1594 aa26.13■■□□□ 1.77
ESR2-210ENST00000555483 CEP170Q5SW79 1584 aa26.13■■□□□ 1.77
ESR2-210ENST00000555483 NUP160Q12769 1436 aa26.1■■□□□ 1.77
ESR2-210ENST00000555483 FHAD1B1AJZ9 1412 aa26.04■■□□□ 1.76
ESR2-210ENST00000555483 TOP2BQ02880 1626 aa26.02■■□□□ 1.76
ESR2-210ENST00000555483 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
ESR2-210ENST00000555483 SHROOM2Q13796 1616 aa25.98■■□□□ 1.75
ESR2-210ENST00000555483 PRG4Q92954 1404 aaPredicted RBP25.94■■□□□ 1.74
ESR2-210ENST00000555483 ERICH3Q5RHP9 1530 aa25.94■■□□□ 1.74
ESR2-210ENST00000555483 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
ESR2-210ENST00000555483 KIF13AQ9H1H9 1805 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms